Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS08320 and ABID97_RS08325 are separated by 31 nucleotides ABID97_RS08325 and ABID97_RS08330 are separated by 9 nucleotides ABID97_RS08330 and ABID97_RS08335 are separated by 17 nucleotides ABID97_RS08335 and ABID97_RS08340 are separated by 21 nucleotides
ABID97_RS08320: ABID97_RS08320 - beta-ketoacyl-ACP synthase II, at 1,748,879 to 1,750,123
_RS08320
ABID97_RS08325: ABID97_RS08325 - hypothetical protein, at 1,750,155 to 1,750,619
_RS08325
ABID97_RS08330: ABID97_RS08330 - RNA polymerase sigma factor RpoE, at 1,750,629 to 1,751,303
_RS08330
ABID97_RS08335: ABID97_RS08335 - sigma-E factor negative regulatory protein, at 1,751,321 to 1,751,986
_RS08335
ABID97_RS08340: ABID97_RS08340 - MucB/RseB C-terminal domain-containing protein, at 1,752,008 to 1,753,075
_RS08340
Position (kb) 1750
1751
1752 Strain fitness (log2 ratio) -1
0
1 at 1750.245 kb on + strand, within ABID97_RS08325 at 1750.245 kb on + strand, within ABID97_RS08325 at 1750.246 kb on - strand, within ABID97_RS08325 at 1750.246 kb on - strand, within ABID97_RS08325 at 1750.246 kb on - strand, within ABID97_RS08325 at 1750.246 kb on - strand, within ABID97_RS08325 at 1750.246 kb on - strand, within ABID97_RS08325 at 1750.546 kb on + strand, within ABID97_RS08325 at 1750.547 kb on - strand, within ABID97_RS08325 at 1750.548 kb on + strand, within ABID97_RS08325 at 1750.548 kb on + strand, within ABID97_RS08325 at 1750.548 kb on + strand, within ABID97_RS08325 at 1750.549 kb on - strand, within ABID97_RS08325 at 1750.776 kb on + strand, within ABID97_RS08330 at 1750.776 kb on + strand, within ABID97_RS08330 at 1750.905 kb on + strand, within ABID97_RS08330 at 1750.905 kb on + strand, within ABID97_RS08330 at 1750.905 kb on + strand, within ABID97_RS08330 at 1750.905 kb on + strand, within ABID97_RS08330 at 1750.905 kb on + strand, within ABID97_RS08330 at 1750.905 kb on + strand, within ABID97_RS08330 at 1750.906 kb on - strand, within ABID97_RS08330 at 1750.906 kb on - strand, within ABID97_RS08330 at 1750.934 kb on + strand, within ABID97_RS08330 at 1750.935 kb on - strand, within ABID97_RS08330 at 1751.026 kb on - strand, within ABID97_RS08330 at 1751.026 kb on - strand, within ABID97_RS08330 at 1751.175 kb on + strand, within ABID97_RS08330 at 1751.175 kb on + strand, within ABID97_RS08330 at 1751.175 kb on + strand, within ABID97_RS08330 at 1751.176 kb on - strand, within ABID97_RS08330 at 1751.176 kb on - strand, within ABID97_RS08330 at 1751.176 kb on - strand, within ABID97_RS08330 at 1751.176 kb on - strand, within ABID97_RS08330 at 1751.176 kb on - strand, within ABID97_RS08330 at 1751.301 kb on + strand at 1751.301 kb on + strand at 1751.301 kb on + strand at 1751.301 kb on + strand at 1751.301 kb on + strand at 1751.302 kb on - strand at 1751.302 kb on - strand at 1751.305 kb on + strand at 1751.306 kb on - strand at 1752.208 kb on + strand, within ABID97_RS08340 at 1752.209 kb on - strand, within ABID97_RS08340 at 1752.209 kb on - strand, within ABID97_RS08340 at 1752.212 kb on + strand, within ABID97_RS08340 at 1752.212 kb on + strand, within ABID97_RS08340 at 1752.212 kb on + strand, within ABID97_RS08340 at 1752.212 kb on + strand, within ABID97_RS08340 at 1752.212 kb on + strand, within ABID97_RS08340 at 1752.213 kb on - strand, within ABID97_RS08340 at 1752.213 kb on - strand, within ABID97_RS08340 at 1752.213 kb on - strand, within ABID97_RS08340 at 1752.213 kb on - strand, within ABID97_RS08340 at 1752.213 kb on - strand, within ABID97_RS08340 at 1752.213 kb on - strand, within ABID97_RS08340
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 1,750,245 + ABID97_RS08325 0.19 -0.4 1,750,245 + ABID97_RS08325 0.19 -0.1 1,750,246 - ABID97_RS08325 0.20 -0.0 1,750,246 - ABID97_RS08325 0.20 +0.2 1,750,246 - ABID97_RS08325 0.20 +0.5 1,750,246 - ABID97_RS08325 0.20 -0.0 1,750,246 - ABID97_RS08325 0.20 -0.0 1,750,546 + ABID97_RS08325 0.84 +0.1 1,750,547 - ABID97_RS08325 0.84 +1.2 1,750,548 + ABID97_RS08325 0.85 -0.1 1,750,548 + ABID97_RS08325 0.85 -0.5 1,750,548 + ABID97_RS08325 0.85 -0.9 1,750,549 - ABID97_RS08325 0.85 -0.4 1,750,776 + ABID97_RS08330 0.22 -1.0 1,750,776 + ABID97_RS08330 0.22 -0.6 1,750,905 + ABID97_RS08330 0.41 -0.1 1,750,905 + ABID97_RS08330 0.41 -1.0 1,750,905 + ABID97_RS08330 0.41 -0.6 1,750,905 + ABID97_RS08330 0.41 -1.1 1,750,905 + ABID97_RS08330 0.41 +0.3 1,750,905 + ABID97_RS08330 0.41 -1.0 1,750,906 - ABID97_RS08330 0.41 -1.3 1,750,906 - ABID97_RS08330 0.41 -1.1 1,750,934 + ABID97_RS08330 0.45 -1.2 1,750,935 - ABID97_RS08330 0.45 -0.8 1,751,026 - ABID97_RS08330 0.59 -0.5 1,751,026 - ABID97_RS08330 0.59 -0.9 1,751,175 + ABID97_RS08330 0.81 -0.4 1,751,175 + ABID97_RS08330 0.81 -1.1 1,751,175 + ABID97_RS08330 0.81 -1.5 1,751,176 - ABID97_RS08330 0.81 -0.8 1,751,176 - ABID97_RS08330 0.81 -0.7 1,751,176 - ABID97_RS08330 0.81 -1.1 1,751,176 - ABID97_RS08330 0.81 -1.3 1,751,176 - ABID97_RS08330 0.81 -0.9 1,751,301 + -1.5 1,751,301 + -0.6 1,751,301 + -0.5 1,751,301 + -0.6 1,751,301 + -0.8 1,751,302 - +0.3 1,751,302 - +0.7 1,751,305 + -1.3 1,751,306 - +0.1 1,752,208 + ABID97_RS08340 0.19 +0.3 1,752,209 - ABID97_RS08340 0.19 -0.2 1,752,209 - ABID97_RS08340 0.19 -0.3 1,752,212 + ABID97_RS08340 0.19 -0.6 1,752,212 + ABID97_RS08340 0.19 -1.5 1,752,212 + ABID97_RS08340 0.19 +0.8 1,752,212 + ABID97_RS08340 0.19 +0.3 1,752,212 + ABID97_RS08340 0.19 -0.3 1,752,213 - ABID97_RS08340 0.19 -0.2 1,752,213 - ABID97_RS08340 0.19 +1.1 1,752,213 - ABID97_RS08340 0.19 +0.4 1,752,213 - ABID97_RS08340 0.19 +0.2 1,752,213 - ABID97_RS08340 0.19 -0.1 1,752,213 - ABID97_RS08340 0.19 +0.6
Or see this region's nucleotide sequence