Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_802 and PfGW456L13_803 are separated by 189 nucleotides PfGW456L13_803 and PfGW456L13_804 are separated by 119 nucleotides PfGW456L13_804 and PfGW456L13_805 are separated by 18 nucleotides
PfGW456L13_802 - hypothetical protein, at 901,781 to 901,993
_802
PfGW456L13_803 - FIG00953403: hypothetical protein, at 902,183 to 902,545
_803
PfGW456L13_804 - hypothetical protein, at 902,665 to 902,784
_804
PfGW456L13_805 - gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (EC 1.2.1.99); 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54) <small>(from data)</small>, at 902,803 to 904,296
_805
Position (kb) 902
903 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 901.756 kb on - strand at 901.756 kb on - strand at 901.848 kb on + strand, within PfGW456L13_802 at 901.848 kb on + strand, within PfGW456L13_802 at 901.848 kb on + strand, within PfGW456L13_802 at 901.848 kb on + strand, within PfGW456L13_802 at 901.848 kb on + strand, within PfGW456L13_802 at 901.849 kb on - strand, within PfGW456L13_802 at 901.849 kb on - strand, within PfGW456L13_802 at 901.849 kb on - strand, within PfGW456L13_802 at 901.849 kb on - strand, within PfGW456L13_802 at 901.849 kb on - strand, within PfGW456L13_802 at 901.849 kb on - strand, within PfGW456L13_802 at 901.886 kb on + strand, within PfGW456L13_802 at 901.887 kb on - strand, within PfGW456L13_802 at 901.935 kb on + strand, within PfGW456L13_802 at 901.935 kb on + strand, within PfGW456L13_802 at 901.935 kb on + strand, within PfGW456L13_802 at 901.936 kb on - strand, within PfGW456L13_802 at 901.936 kb on - strand, within PfGW456L13_802 at 901.936 kb on - strand, within PfGW456L13_802 at 901.936 kb on - strand, within PfGW456L13_802 at 901.950 kb on + strand, within PfGW456L13_802 at 901.950 kb on + strand, within PfGW456L13_802 at 901.950 kb on + strand, within PfGW456L13_802 at 901.950 kb on + strand at 901.950 kb on + strand, within PfGW456L13_802 at 901.950 kb on + strand, within PfGW456L13_802 at 901.950 kb on + strand, within PfGW456L13_802 at 901.951 kb on - strand, within PfGW456L13_802 at 901.951 kb on - strand, within PfGW456L13_802 at 901.951 kb on - strand, within PfGW456L13_802 at 901.951 kb on - strand, within PfGW456L13_802 at 901.951 kb on - strand, within PfGW456L13_802 at 901.951 kb on - strand, within PfGW456L13_802 at 901.951 kb on - strand, within PfGW456L13_802 at 901.964 kb on - strand, within PfGW456L13_802 at 901.964 kb on - strand, within PfGW456L13_802 at 901.995 kb on + strand at 901.996 kb on - strand at 901.996 kb on - strand at 902.064 kb on + strand at 902.064 kb on + strand at 902.086 kb on + strand at 902.087 kb on - strand at 902.087 kb on - strand at 902.087 kb on - strand at 902.087 kb on - strand at 902.098 kb on + strand at 902.098 kb on + strand at 902.098 kb on + strand at 902.098 kb on + strand at 902.098 kb on + strand at 902.098 kb on + strand at 902.099 kb on - strand at 902.099 kb on - strand at 902.099 kb on - strand at 902.099 kb on - strand at 902.099 kb on - strand at 902.165 kb on + strand at 902.166 kb on - strand at 902.208 kb on + strand at 902.208 kb on + strand at 902.208 kb on + strand at 902.208 kb on + strand at 902.208 kb on + strand at 902.208 kb on + strand at 902.208 kb on - strand at 902.209 kb on - strand at 902.209 kb on - strand at 902.209 kb on - strand at 902.209 kb on - strand at 902.209 kb on - strand at 902.209 kb on - strand at 902.209 kb on - strand at 902.209 kb on - strand at 902.209 kb on - strand at 902.209 kb on - strand at 902.209 kb on - strand at 902.209 kb on - strand at 902.315 kb on + strand, within PfGW456L13_803 at 902.315 kb on + strand, within PfGW456L13_803 at 902.315 kb on + strand, within PfGW456L13_803 at 902.315 kb on + strand, within PfGW456L13_803 at 902.315 kb on + strand, within PfGW456L13_803 at 902.315 kb on + strand, within PfGW456L13_803 at 902.316 kb on - strand, within PfGW456L13_803 at 902.316 kb on - strand, within PfGW456L13_803 at 902.316 kb on - strand, within PfGW456L13_803 at 902.316 kb on - strand, within PfGW456L13_803 at 902.316 kb on - strand, within PfGW456L13_803 at 902.316 kb on - strand, within PfGW456L13_803 at 902.316 kb on - strand, within PfGW456L13_803 at 902.316 kb on - strand, within PfGW456L13_803 at 902.316 kb on - strand, within PfGW456L13_803 at 902.346 kb on + strand, within PfGW456L13_803 at 902.367 kb on - strand, within PfGW456L13_803 at 902.367 kb on - strand, within PfGW456L13_803 at 902.430 kb on + strand, within PfGW456L13_803 at 902.430 kb on + strand, within PfGW456L13_803 at 902.430 kb on + strand, within PfGW456L13_803 at 902.430 kb on + strand, within PfGW456L13_803 at 902.430 kb on + strand, within PfGW456L13_803 at 902.431 kb on - strand, within PfGW456L13_803 at 902.431 kb on - strand, within PfGW456L13_803 at 902.431 kb on - strand, within PfGW456L13_803 at 902.431 kb on - strand, within PfGW456L13_803 at 902.439 kb on + strand, within PfGW456L13_803 at 902.439 kb on + strand, within PfGW456L13_803 at 902.439 kb on + strand, within PfGW456L13_803 at 902.439 kb on + strand, within PfGW456L13_803 at 902.439 kb on + strand, within PfGW456L13_803 at 902.439 kb on + strand, within PfGW456L13_803 at 902.439 kb on + strand, within PfGW456L13_803 at 902.439 kb on + strand, within PfGW456L13_803 at 902.440 kb on - strand, within PfGW456L13_803 at 902.440 kb on - strand, within PfGW456L13_803 at 902.440 kb on - strand, within PfGW456L13_803 at 902.440 kb on - strand, within PfGW456L13_803 at 902.440 kb on - strand, within PfGW456L13_803 at 902.440 kb on - strand, within PfGW456L13_803 at 902.440 kb on - strand, within PfGW456L13_803 at 902.440 kb on - strand, within PfGW456L13_803 at 902.468 kb on + strand, within PfGW456L13_803 at 902.468 kb on + strand, within PfGW456L13_803 at 902.468 kb on + strand, within PfGW456L13_803 at 902.468 kb on + strand, within PfGW456L13_803 at 902.468 kb on + strand, within PfGW456L13_803 at 902.468 kb on + strand, within PfGW456L13_803 at 902.468 kb on + strand, within PfGW456L13_803 at 902.468 kb on + strand, within PfGW456L13_803 at 902.469 kb on - strand, within PfGW456L13_803 at 902.469 kb on - strand, within PfGW456L13_803 at 902.551 kb on + strand at 902.551 kb on + strand at 902.551 kb on + strand at 902.552 kb on - strand at 902.552 kb on - strand at 902.552 kb on - strand at 902.552 kb on - strand at 902.552 kb on - strand at 902.552 kb on - strand at 902.552 kb on - strand at 902.552 kb on - strand at 902.552 kb on - strand at 902.552 kb on - strand at 902.552 kb on - strand at 902.552 kb on - strand at 902.619 kb on + strand at 902.619 kb on + strand at 902.619 kb on + strand at 902.620 kb on - strand at 902.620 kb on - strand at 902.620 kb on - strand at 902.620 kb on - strand at 902.626 kb on - strand at 902.628 kb on + strand at 902.628 kb on + strand at 902.629 kb on - strand at 902.629 kb on - strand at 902.661 kb on + strand at 902.661 kb on + strand at 902.661 kb on + strand at 902.661 kb on + strand at 902.661 kb on + strand at 902.662 kb on - strand at 902.662 kb on - strand at 902.670 kb on + strand at 902.671 kb on - strand at 902.671 kb on - strand at 902.671 kb on - strand at 902.672 kb on + strand at 902.698 kb on + strand, within PfGW456L13_804 at 902.698 kb on + strand, within PfGW456L13_804 at 902.779 kb on + strand at 902.779 kb on + strand at 902.780 kb on - strand at 902.785 kb on + strand at 902.785 kb on + strand at 902.785 kb on + strand at 902.785 kb on + strand at 902.786 kb on - strand at 902.786 kb on - strand at 902.869 kb on + strand at 902.869 kb on + strand at 902.869 kb on + strand at 902.869 kb on + strand at 902.870 kb on - strand at 902.870 kb on - strand at 902.870 kb on - strand at 902.870 kb on - strand at 902.871 kb on + strand at 902.871 kb on + strand at 902.871 kb on + strand at 902.871 kb on + strand at 902.872 kb on - strand at 902.884 kb on + strand at 903.154 kb on + strand, within PfGW456L13_805 at 903.154 kb on + strand, within PfGW456L13_805 at 903.524 kb on + strand, within PfGW456L13_805 at 903.565 kb on + strand, within PfGW456L13_805 at 903.565 kb on + strand, within PfGW456L13_805 at 903.565 kb on + strand, within PfGW456L13_805 at 903.566 kb on - strand, within PfGW456L13_805 at 903.624 kb on + strand, within PfGW456L13_805
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 901,756 - +0.9 901,756 - +0.8 901,848 + PfGW456L13_802 0.31 +0.1 901,848 + PfGW456L13_802 0.31 -0.5 901,848 + PfGW456L13_802 0.31 +0.8 901,848 + PfGW456L13_802 0.31 +1.0 901,848 + PfGW456L13_802 0.31 -0.4 901,849 - PfGW456L13_802 0.32 -0.1 901,849 - PfGW456L13_802 0.32 +0.8 901,849 - PfGW456L13_802 0.32 +0.7 901,849 - PfGW456L13_802 0.32 +0.1 901,849 - PfGW456L13_802 0.32 +0.5 901,849 - PfGW456L13_802 0.32 -0.2 901,886 + PfGW456L13_802 0.49 +0.1 901,887 - PfGW456L13_802 0.50 +0.1 901,935 + PfGW456L13_802 0.72 +0.7 901,935 + PfGW456L13_802 0.72 +0.5 901,935 + PfGW456L13_802 0.72 +1.6 901,936 - PfGW456L13_802 0.73 -1.5 901,936 - PfGW456L13_802 0.73 -0.3 901,936 - PfGW456L13_802 0.73 +0.4 901,936 - PfGW456L13_802 0.73 +0.5 901,950 + PfGW456L13_802 0.79 +1.7 901,950 + PfGW456L13_802 0.79 +1.5 901,950 + PfGW456L13_802 0.79 +0.4 901,950 + +1.4 901,950 + PfGW456L13_802 0.79 +1.5 901,950 + PfGW456L13_802 0.79 -2.0 901,950 + PfGW456L13_802 0.79 +0.8 901,951 - PfGW456L13_802 0.80 +0.3 901,951 - PfGW456L13_802 0.80 -1.8 901,951 - PfGW456L13_802 0.80 -0.6 901,951 - PfGW456L13_802 0.80 +0.7 901,951 - PfGW456L13_802 0.80 +2.7 901,951 - PfGW456L13_802 0.80 -2.4 901,951 - PfGW456L13_802 0.80 +0.6 901,964 - PfGW456L13_802 0.86 +0.4 901,964 - PfGW456L13_802 0.86 +0.2 901,995 + +2.6 901,996 - +0.3 901,996 - +0.7 902,064 + +0.9 902,064 + -1.9 902,086 + +0.4 902,087 - +0.6 902,087 - -2.2 902,087 - -0.6 902,087 - -1.1 902,098 + +0.9 902,098 + -0.7 902,098 + -1.2 902,098 + +0.3 902,098 + +0.7 902,098 + +3.7 902,099 - +1.2 902,099 - -0.6 902,099 - +0.3 902,099 - -0.1 902,099 - -1.2 902,165 + +0.0 902,166 - -0.1 902,208 + +0.6 902,208 + +1.8 902,208 + -0.3 902,208 + +1.6 902,208 + +1.2 902,208 + +0.1 902,208 - -1.0 902,209 - +0.2 902,209 - +0.8 902,209 - +0.1 902,209 - +0.4 902,209 - -0.5 902,209 - +0.4 902,209 - -0.7 902,209 - +1.2 902,209 - +0.0 902,209 - +1.0 902,209 - -1.4 902,209 - +1.0 902,315 + PfGW456L13_803 0.36 +1.6 902,315 + PfGW456L13_803 0.36 -1.0 902,315 + PfGW456L13_803 0.36 +0.9 902,315 + PfGW456L13_803 0.36 +0.1 902,315 + PfGW456L13_803 0.36 +1.8 902,315 + PfGW456L13_803 0.36 -0.4 902,316 - PfGW456L13_803 0.37 +0.4 902,316 - PfGW456L13_803 0.37 -1.5 902,316 - PfGW456L13_803 0.37 +2.7 902,316 - PfGW456L13_803 0.37 +0.7 902,316 - PfGW456L13_803 0.37 -0.0 902,316 - PfGW456L13_803 0.37 -0.7 902,316 - PfGW456L13_803 0.37 +1.1 902,316 - PfGW456L13_803 0.37 -0.3 902,316 - PfGW456L13_803 0.37 -0.3 902,346 + PfGW456L13_803 0.45 +0.5 902,367 - PfGW456L13_803 0.51 +0.9 902,367 - PfGW456L13_803 0.51 -0.1 902,430 + PfGW456L13_803 0.68 -0.8 902,430 + PfGW456L13_803 0.68 +0.9 902,430 + PfGW456L13_803 0.68 +0.7 902,430 + PfGW456L13_803 0.68 -1.8 902,430 + PfGW456L13_803 0.68 +0.7 902,431 - PfGW456L13_803 0.68 -0.1 902,431 - PfGW456L13_803 0.68 +0.4 902,431 - PfGW456L13_803 0.68 +0.4 902,431 - PfGW456L13_803 0.68 -0.4 902,439 + PfGW456L13_803 0.71 +1.0 902,439 + PfGW456L13_803 0.71 +1.3 902,439 + PfGW456L13_803 0.71 -0.6 902,439 + PfGW456L13_803 0.71 +0.5 902,439 + PfGW456L13_803 0.71 +0.5 902,439 + PfGW456L13_803 0.71 +0.7 902,439 + PfGW456L13_803 0.71 +1.0 902,439 + PfGW456L13_803 0.71 +1.6 902,440 - PfGW456L13_803 0.71 +0.1 902,440 - PfGW456L13_803 0.71 -1.2 902,440 - PfGW456L13_803 0.71 +0.4 902,440 - PfGW456L13_803 0.71 -0.5 902,440 - PfGW456L13_803 0.71 +0.7 902,440 - PfGW456L13_803 0.71 -3.2 902,440 - PfGW456L13_803 0.71 +1.6 902,440 - PfGW456L13_803 0.71 -0.5 902,468 + PfGW456L13_803 0.79 -0.2 902,468 + PfGW456L13_803 0.79 +0.6 902,468 + PfGW456L13_803 0.79 +1.0 902,468 + PfGW456L13_803 0.79 +1.1 902,468 + PfGW456L13_803 0.79 +2.3 902,468 + PfGW456L13_803 0.79 +0.8 902,468 + PfGW456L13_803 0.79 -0.8 902,468 + PfGW456L13_803 0.79 +1.0 902,469 - PfGW456L13_803 0.79 +0.3 902,469 - PfGW456L13_803 0.79 +0.1 902,551 + +0.8 902,551 + -1.0 902,551 + +2.1 902,552 - +0.9 902,552 - +1.1 902,552 - +1.5 902,552 - -1.3 902,552 - -1.2 902,552 - +1.2 902,552 - +0.2 902,552 - +1.5 902,552 - +0.7 902,552 - -0.3 902,552 - -0.0 902,552 - +0.1 902,619 + +1.1 902,619 + +1.3 902,619 + +0.1 902,620 - +0.3 902,620 - -2.6 902,620 - +1.4 902,620 - +0.9 902,626 - -0.3 902,628 + +0.5 902,628 + +0.8 902,629 - -0.6 902,629 - +1.2 902,661 + +0.0 902,661 + +1.9 902,661 + +1.2 902,661 + +1.2 902,661 + -2.4 902,662 - +1.0 902,662 - +0.0 902,670 + +0.5 902,671 - -1.1 902,671 - -0.2 902,671 - -0.8 902,672 + -0.8 902,698 + PfGW456L13_804 0.28 -1.1 902,698 + PfGW456L13_804 0.28 +2.8 902,779 + +0.2 902,779 + +2.4 902,780 - -1.3 902,785 + +0.1 902,785 + -0.2 902,785 + +2.2 902,785 + +1.1 902,786 - -0.8 902,786 - +1.3 902,869 + -0.8 902,869 + +0.5 902,869 + -3.9 902,869 + +1.0 902,870 - -2.7 902,870 - -1.1 902,870 - +0.3 902,870 - -0.8 902,871 + +0.9 902,871 + -2.4 902,871 + -1.7 902,871 + -1.9 902,872 - +0.3 902,884 + -4.2 903,154 + PfGW456L13_805 0.23 +0.0 903,154 + PfGW456L13_805 0.23 +0.6 903,524 + PfGW456L13_805 0.48 -0.4 903,565 + PfGW456L13_805 0.51 -1.1 903,565 + PfGW456L13_805 0.51 -0.5 903,565 + PfGW456L13_805 0.51 +0.3 903,566 - PfGW456L13_805 0.51 -0.4 903,624 + PfGW456L13_805 0.55 -0.9
Or see this region's nucleotide sequence