Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_764 and PfGW456L13_765 overlap by 1 nucleotides PfGW456L13_765 and PfGW456L13_766 are separated by 19 nucleotides PfGW456L13_766 and PfGW456L13_767 are separated by 45 nucleotides PfGW456L13_767 and PfGW456L13_768 are separated by 18 nucleotides PfGW456L13_768 and PfGW456L13_769 are separated by 194 nucleotides
PfGW456L13_764 - 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.39), at 869,945 to 870,835
_764
PfGW456L13_765 - Chorismate--pyruvate lyase (EC 4.1.3.40), at 870,835 to 871,239
_765
PfGW456L13_766 - hypothetical protein, at 871,259 to 871,552
_766
PfGW456L13_767 - Rubredoxin, at 871,598 to 871,768
_767
PfGW456L13_768 - Rubredoxin-NAD(+) reductase (EC 1.18.1.1), at 871,787 to 872,935
_768
PfGW456L13_769 - DNA-binding protein HU-alpha, at 873,130 to 873,405
_769
Position (kb) 871
872
873 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 870.832 kb on - strand at 870.832 kb on - strand at 870.832 kb on - strand at 871.151 kb on + strand, within PfGW456L13_765 at 871.151 kb on + strand, within PfGW456L13_765 at 871.151 kb on + strand, within PfGW456L13_765 at 871.151 kb on + strand, within PfGW456L13_765 at 871.151 kb on + strand, within PfGW456L13_765 at 871.151 kb on + strand, within PfGW456L13_765 at 871.152 kb on - strand, within PfGW456L13_765 at 871.152 kb on - strand, within PfGW456L13_765 at 871.152 kb on - strand, within PfGW456L13_765 at 871.152 kb on - strand, within PfGW456L13_765 at 871.152 kb on - strand, within PfGW456L13_765 at 871.436 kb on + strand, within PfGW456L13_766 at 871.437 kb on - strand, within PfGW456L13_766 at 871.544 kb on + strand at 871.544 kb on + strand at 871.544 kb on + strand at 871.545 kb on - strand at 871.545 kb on - strand at 871.545 kb on - strand at 871.592 kb on + strand at 871.592 kb on + strand at 871.592 kb on + strand at 871.592 kb on + strand at 871.592 kb on + strand at 871.592 kb on + strand at 871.592 kb on + strand at 871.592 kb on + strand at 871.593 kb on - strand at 871.593 kb on - strand at 871.615 kb on + strand, within PfGW456L13_767 at 871.615 kb on + strand, within PfGW456L13_767 at 871.615 kb on + strand, within PfGW456L13_767 at 871.615 kb on + strand, within PfGW456L13_767 at 871.615 kb on + strand, within PfGW456L13_767 at 871.615 kb on + strand, within PfGW456L13_767 at 871.616 kb on - strand, within PfGW456L13_767 at 871.616 kb on - strand, within PfGW456L13_767 at 871.634 kb on + strand, within PfGW456L13_767 at 871.634 kb on + strand, within PfGW456L13_767 at 871.634 kb on + strand, within PfGW456L13_767 at 871.634 kb on + strand, within PfGW456L13_767 at 871.770 kb on + strand at 871.781 kb on + strand at 871.803 kb on + strand at 871.804 kb on - strand at 871.804 kb on - strand at 871.829 kb on + strand at 871.829 kb on + strand at 871.908 kb on - strand, within PfGW456L13_768 at 872.010 kb on + strand, within PfGW456L13_768 at 872.010 kb on + strand, within PfGW456L13_768 at 872.010 kb on + strand, within PfGW456L13_768 at 872.010 kb on + strand, within PfGW456L13_768 at 872.010 kb on + strand, within PfGW456L13_768 at 872.010 kb on + strand, within PfGW456L13_768 at 872.010 kb on + strand, within PfGW456L13_768 at 872.010 kb on + strand, within PfGW456L13_768 at 872.010 kb on + strand, within PfGW456L13_768 at 872.010 kb on + strand, within PfGW456L13_768 at 872.010 kb on + strand, within PfGW456L13_768 at 872.010 kb on + strand, within PfGW456L13_768 at 872.011 kb on - strand, within PfGW456L13_768 at 872.011 kb on - strand, within PfGW456L13_768 at 872.011 kb on - strand, within PfGW456L13_768 at 872.011 kb on - strand, within PfGW456L13_768 at 872.011 kb on - strand, within PfGW456L13_768 at 872.014 kb on + strand, within PfGW456L13_768 at 872.015 kb on - strand, within PfGW456L13_768 at 872.015 kb on - strand, within PfGW456L13_768 at 872.084 kb on + strand, within PfGW456L13_768 at 872.084 kb on + strand, within PfGW456L13_768 at 872.085 kb on - strand, within PfGW456L13_768 at 872.183 kb on + strand, within PfGW456L13_768 at 872.183 kb on + strand, within PfGW456L13_768 at 872.183 kb on + strand, within PfGW456L13_768 at 872.183 kb on + strand, within PfGW456L13_768 at 872.183 kb on + strand, within PfGW456L13_768 at 872.184 kb on - strand, within PfGW456L13_768 at 872.285 kb on + strand, within PfGW456L13_768 at 872.597 kb on + strand, within PfGW456L13_768 at 872.597 kb on + strand, within PfGW456L13_768 at 872.598 kb on - strand, within PfGW456L13_768 at 872.598 kb on - strand, within PfGW456L13_768 at 872.598 kb on - strand, within PfGW456L13_768 at 872.598 kb on - strand, within PfGW456L13_768 at 872.642 kb on + strand, within PfGW456L13_768 at 872.642 kb on + strand, within PfGW456L13_768 at 872.642 kb on + strand, within PfGW456L13_768 at 872.642 kb on + strand, within PfGW456L13_768 at 872.642 kb on + strand, within PfGW456L13_768 at 872.643 kb on - strand, within PfGW456L13_768 at 872.643 kb on - strand, within PfGW456L13_768 at 872.643 kb on - strand, within PfGW456L13_768 at 872.643 kb on - strand, within PfGW456L13_768 at 872.643 kb on - strand, within PfGW456L13_768 at 872.643 kb on - strand, within PfGW456L13_768 at 872.714 kb on + strand, within PfGW456L13_768 at 872.714 kb on + strand, within PfGW456L13_768 at 872.714 kb on + strand, within PfGW456L13_768 at 872.714 kb on + strand, within PfGW456L13_768 at 872.832 kb on + strand at 872.934 kb on - strand at 872.937 kb on + strand at 873.044 kb on + strand at 873.044 kb on + strand at 873.044 kb on + strand at 873.044 kb on + strand at 873.045 kb on - strand at 873.077 kb on + strand at 873.078 kb on - strand at 873.095 kb on + strand at 873.095 kb on + strand at 873.095 kb on + strand at 873.095 kb on + strand at 873.095 kb on + strand at 873.095 kb on + strand at 873.095 kb on + strand at 873.095 kb on + strand at 873.095 kb on + strand at 873.095 kb on + strand at 873.095 kb on + strand at 873.095 kb on + strand at 873.095 kb on + strand at 873.095 kb on + strand at 873.096 kb on - strand at 873.096 kb on - strand at 873.096 kb on - strand at 873.096 kb on - strand at 873.135 kb on + strand at 873.135 kb on + strand at 873.135 kb on + strand at 873.135 kb on + strand at 873.136 kb on - strand at 873.274 kb on - strand, within PfGW456L13_769 at 873.396 kb on + strand at 873.404 kb on - strand at 873.569 kb on + strand at 873.570 kb on - strand at 873.570 kb on - strand at 873.614 kb on + strand at 873.635 kb on + strand at 873.635 kb on + strand at 873.635 kb on + strand at 873.635 kb on + strand at 873.635 kb on + strand at 873.635 kb on + strand at 873.635 kb on + strand at 873.636 kb on - strand at 873.636 kb on - strand at 873.636 kb on - strand at 873.636 kb on - strand at 873.636 kb on - strand at 873.636 kb on - strand at 873.636 kb on - strand at 873.636 kb on - strand at 873.636 kb on - strand at 873.766 kb on + strand at 873.789 kb on + strand at 873.790 kb on - strand at 873.790 kb on - strand at 873.828 kb on + strand at 873.891 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 870,832 - +0.5 870,832 - +0.5 870,832 - -0.8 871,151 + PfGW456L13_765 0.78 +0.6 871,151 + PfGW456L13_765 0.78 +1.7 871,151 + PfGW456L13_765 0.78 +3.3 871,151 + PfGW456L13_765 0.78 -0.7 871,151 + PfGW456L13_765 0.78 +2.4 871,151 + PfGW456L13_765 0.78 +1.4 871,152 - PfGW456L13_765 0.78 -0.1 871,152 - PfGW456L13_765 0.78 +0.5 871,152 - PfGW456L13_765 0.78 -1.3 871,152 - PfGW456L13_765 0.78 -0.7 871,152 - PfGW456L13_765 0.78 +0.9 871,436 + PfGW456L13_766 0.60 -0.2 871,437 - PfGW456L13_766 0.61 +0.5 871,544 + +0.0 871,544 + -0.2 871,544 + +0.7 871,545 - -1.7 871,545 - +0.4 871,545 - -0.6 871,592 + -2.4 871,592 + -0.1 871,592 + -1.1 871,592 + -4.4 871,592 + -0.5 871,592 + -1.5 871,592 + -0.5 871,592 + -0.6 871,593 - -0.5 871,593 - -1.1 871,615 + PfGW456L13_767 0.10 +0.1 871,615 + PfGW456L13_767 0.10 -4.0 871,615 + PfGW456L13_767 0.10 -1.4 871,615 + PfGW456L13_767 0.10 +0.0 871,615 + PfGW456L13_767 0.10 +1.9 871,615 + PfGW456L13_767 0.10 +1.7 871,616 - PfGW456L13_767 0.11 -0.7 871,616 - PfGW456L13_767 0.11 -2.1 871,634 + PfGW456L13_767 0.21 -0.6 871,634 + PfGW456L13_767 0.21 -0.5 871,634 + PfGW456L13_767 0.21 +0.3 871,634 + PfGW456L13_767 0.21 -0.2 871,770 + -1.0 871,781 + +0.3 871,803 + +1.2 871,804 - +0.7 871,804 - -1.8 871,829 + -1.2 871,829 + +0.2 871,908 - PfGW456L13_768 0.11 -1.6 872,010 + PfGW456L13_768 0.19 +1.0 872,010 + PfGW456L13_768 0.19 -1.3 872,010 + PfGW456L13_768 0.19 -0.8 872,010 + PfGW456L13_768 0.19 +0.5 872,010 + PfGW456L13_768 0.19 -0.0 872,010 + PfGW456L13_768 0.19 +0.4 872,010 + PfGW456L13_768 0.19 -3.1 872,010 + PfGW456L13_768 0.19 -1.8 872,010 + PfGW456L13_768 0.19 -1.4 872,010 + PfGW456L13_768 0.19 -0.3 872,010 + PfGW456L13_768 0.19 +0.3 872,010 + PfGW456L13_768 0.19 -1.2 872,011 - PfGW456L13_768 0.19 -0.4 872,011 - PfGW456L13_768 0.19 +0.4 872,011 - PfGW456L13_768 0.19 -1.5 872,011 - PfGW456L13_768 0.19 -2.8 872,011 - PfGW456L13_768 0.19 -0.4 872,014 + PfGW456L13_768 0.20 +0.8 872,015 - PfGW456L13_768 0.20 +0.8 872,015 - PfGW456L13_768 0.20 -0.8 872,084 + PfGW456L13_768 0.26 -0.1 872,084 + PfGW456L13_768 0.26 +0.5 872,085 - PfGW456L13_768 0.26 +0.4 872,183 + PfGW456L13_768 0.34 +0.8 872,183 + PfGW456L13_768 0.34 -0.4 872,183 + PfGW456L13_768 0.34 +0.9 872,183 + PfGW456L13_768 0.34 +0.7 872,183 + PfGW456L13_768 0.34 +0.9 872,184 - PfGW456L13_768 0.35 -1.1 872,285 + PfGW456L13_768 0.43 -0.3 872,597 + PfGW456L13_768 0.70 -0.7 872,597 + PfGW456L13_768 0.70 +0.0 872,598 - PfGW456L13_768 0.71 -0.7 872,598 - PfGW456L13_768 0.71 -1.8 872,598 - PfGW456L13_768 0.71 -0.1 872,598 - PfGW456L13_768 0.71 -2.3 872,642 + PfGW456L13_768 0.74 +0.7 872,642 + PfGW456L13_768 0.74 -0.5 872,642 + PfGW456L13_768 0.74 +0.1 872,642 + PfGW456L13_768 0.74 -0.5 872,642 + PfGW456L13_768 0.74 +0.1 872,643 - PfGW456L13_768 0.74 -0.4 872,643 - PfGW456L13_768 0.74 +0.2 872,643 - PfGW456L13_768 0.74 -1.0 872,643 - PfGW456L13_768 0.74 +0.4 872,643 - PfGW456L13_768 0.74 -1.1 872,643 - PfGW456L13_768 0.74 +0.3 872,714 + PfGW456L13_768 0.81 -0.8 872,714 + PfGW456L13_768 0.81 -1.3 872,714 + PfGW456L13_768 0.81 -2.2 872,714 + PfGW456L13_768 0.81 -3.2 872,832 + -0.8 872,934 - +0.1 872,937 + +0.6 873,044 + -2.1 873,044 + -0.6 873,044 + -0.7 873,044 + -1.2 873,045 - -4.1 873,077 + -1.7 873,078 - -2.4 873,095 + -1.3 873,095 + -2.8 873,095 + -2.1 873,095 + -1.7 873,095 + -1.4 873,095 + -4.1 873,095 + -2.4 873,095 + -2.6 873,095 + -2.2 873,095 + +0.9 873,095 + -2.9 873,095 + -4.8 873,095 + -1.4 873,095 + -2.8 873,096 - -0.3 873,096 - +1.2 873,096 - +0.3 873,096 - -0.2 873,135 + -0.4 873,135 + +0.8 873,135 + -1.4 873,135 + +0.4 873,136 - -0.7 873,274 - PfGW456L13_769 0.52 -0.7 873,396 + -1.4 873,404 - +1.1 873,569 + +0.7 873,570 - +0.5 873,570 - +1.1 873,614 + -1.7 873,635 + -3.1 873,635 + -0.7 873,635 + -1.3 873,635 + +1.0 873,635 + +0.3 873,635 + +0.7 873,635 + +0.4 873,636 - -2.0 873,636 - +0.2 873,636 - +0.2 873,636 - -0.2 873,636 - -1.4 873,636 - -0.7 873,636 - -1.1 873,636 - -2.5 873,636 - +1.0 873,766 + +0.3 873,789 + +0.4 873,790 - +0.1 873,790 - +0.1 873,828 + +0.7 873,891 - +0.6
Or see this region's nucleotide sequence