Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_729 and PfGW456L13_730 are separated by 254 nucleotides PfGW456L13_730 and PfGW456L13_731 are separated by 16 nucleotides PfGW456L13_731 and PfGW456L13_732 are separated by 10 nucleotides PfGW456L13_732 and PfGW456L13_733 are separated by 89 nucleotides
PfGW456L13_729 - Pyruvate carboxyl transferase subunit B (EC 6.4.1.1), at 828,524 to 830,332
_729
PfGW456L13_730 - Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1), at 830,587 to 831,258
_730
PfGW456L13_731 - N-acetylglutamate synthase (EC 2.3.1.1), at 831,275 to 831,721
_731
PfGW456L13_732 - Transcriptional regulator, at 831,732 to 832,355
_732
PfGW456L13_733 - Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1), at 832,445 to 834,001
_733
Position (kb) 831
832 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 830.335 kb on + strand at 830.336 kb on - strand at 830.336 kb on - strand at 830.347 kb on + strand at 830.348 kb on - strand at 830.357 kb on + strand at 830.357 kb on + strand at 830.357 kb on + strand at 830.357 kb on + strand at 830.357 kb on + strand at 830.358 kb on - strand at 830.358 kb on - strand at 830.358 kb on - strand at 830.358 kb on - strand at 830.359 kb on + strand at 830.360 kb on - strand at 830.360 kb on - strand at 830.390 kb on + strand at 830.390 kb on + strand at 830.390 kb on + strand at 830.538 kb on + strand at 830.538 kb on + strand at 830.538 kb on + strand at 830.539 kb on - strand at 830.539 kb on - strand at 830.539 kb on - strand at 830.539 kb on - strand at 830.569 kb on - strand at 830.569 kb on - strand at 830.789 kb on + strand, within PfGW456L13_730 at 830.789 kb on + strand, within PfGW456L13_730 at 830.870 kb on + strand, within PfGW456L13_730 at 830.871 kb on - strand, within PfGW456L13_730 at 831.020 kb on + strand, within PfGW456L13_730 at 831.021 kb on - strand, within PfGW456L13_730 at 831.098 kb on + strand, within PfGW456L13_730 at 831.098 kb on + strand, within PfGW456L13_730 at 831.099 kb on - strand, within PfGW456L13_730 at 831.099 kb on - strand, within PfGW456L13_730 at 831.099 kb on - strand, within PfGW456L13_730 at 831.191 kb on + strand at 831.191 kb on + strand at 831.191 kb on + strand at 831.191 kb on + strand at 831.192 kb on - strand at 831.192 kb on - strand at 831.192 kb on - strand at 831.192 kb on - strand at 831.192 kb on - strand at 831.192 kb on - strand at 831.276 kb on + strand at 831.276 kb on + strand at 831.276 kb on + strand at 831.276 kb on + strand at 831.276 kb on + strand at 831.276 kb on + strand at 831.276 kb on + strand at 831.276 kb on + strand at 831.276 kb on + strand at 831.276 kb on + strand at 831.276 kb on + strand at 831.276 kb on + strand at 831.276 kb on + strand at 831.276 kb on + strand at 831.276 kb on + strand at 831.276 kb on + strand at 831.276 kb on + strand at 831.277 kb on - strand at 831.277 kb on - strand at 831.277 kb on - strand at 831.277 kb on - strand at 831.277 kb on - strand at 831.277 kb on - strand at 831.277 kb on - strand at 831.277 kb on - strand at 831.277 kb on - strand at 831.277 kb on - strand at 831.277 kb on - strand at 831.277 kb on - strand at 831.277 kb on - strand at 831.277 kb on - strand at 831.277 kb on - strand at 831.277 kb on - strand at 831.278 kb on + strand at 831.278 kb on + strand at 831.278 kb on + strand at 831.278 kb on + strand at 831.278 kb on + strand at 831.278 kb on + strand at 831.279 kb on - strand at 831.279 kb on - strand at 831.327 kb on + strand, within PfGW456L13_731 at 831.405 kb on + strand, within PfGW456L13_731 at 831.405 kb on + strand, within PfGW456L13_731 at 831.477 kb on + strand at 831.477 kb on + strand, within PfGW456L13_731 at 831.478 kb on - strand, within PfGW456L13_731 at 831.478 kb on - strand, within PfGW456L13_731 at 831.513 kb on + strand, within PfGW456L13_731 at 831.513 kb on + strand, within PfGW456L13_731 at 831.513 kb on + strand, within PfGW456L13_731 at 831.513 kb on + strand, within PfGW456L13_731 at 831.513 kb on + strand, within PfGW456L13_731 at 831.513 kb on + strand, within PfGW456L13_731 at 831.514 kb on - strand, within PfGW456L13_731 at 831.514 kb on - strand, within PfGW456L13_731 at 831.514 kb on - strand, within PfGW456L13_731 at 831.514 kb on - strand, within PfGW456L13_731 at 831.514 kb on - strand at 831.514 kb on - strand, within PfGW456L13_731 at 831.639 kb on + strand, within PfGW456L13_731 at 831.639 kb on + strand, within PfGW456L13_731 at 831.639 kb on + strand, within PfGW456L13_731 at 831.639 kb on + strand, within PfGW456L13_731 at 831.640 kb on - strand, within PfGW456L13_731 at 831.640 kb on - strand, within PfGW456L13_731 at 831.640 kb on - strand, within PfGW456L13_731 at 831.651 kb on + strand, within PfGW456L13_731 at 831.652 kb on - strand, within PfGW456L13_731 at 831.652 kb on - strand, within PfGW456L13_731 at 831.904 kb on + strand, within PfGW456L13_732 at 831.904 kb on + strand, within PfGW456L13_732 at 831.904 kb on + strand, within PfGW456L13_732 at 831.905 kb on - strand, within PfGW456L13_732 at 831.905 kb on - strand, within PfGW456L13_732 at 831.905 kb on - strand, within PfGW456L13_732 at 832.024 kb on + strand, within PfGW456L13_732 at 832.032 kb on + strand, within PfGW456L13_732 at 832.042 kb on + strand, within PfGW456L13_732 at 832.042 kb on + strand, within PfGW456L13_732 at 832.042 kb on + strand, within PfGW456L13_732 at 832.042 kb on + strand, within PfGW456L13_732 at 832.042 kb on + strand, within PfGW456L13_732 at 832.042 kb on + strand, within PfGW456L13_732 at 832.042 kb on + strand, within PfGW456L13_732 at 832.042 kb on + strand, within PfGW456L13_732 at 832.042 kb on + strand, within PfGW456L13_732 at 832.042 kb on + strand, within PfGW456L13_732 at 832.042 kb on + strand, within PfGW456L13_732 at 832.042 kb on + strand, within PfGW456L13_732 at 832.042 kb on + strand, within PfGW456L13_732 at 832.043 kb on - strand, within PfGW456L13_732 at 832.043 kb on - strand, within PfGW456L13_732 at 832.043 kb on - strand, within PfGW456L13_732 at 832.043 kb on - strand, within PfGW456L13_732 at 832.043 kb on - strand, within PfGW456L13_732 at 832.043 kb on - strand, within PfGW456L13_732 at 832.043 kb on - strand, within PfGW456L13_732 at 832.043 kb on - strand, within PfGW456L13_732 at 832.043 kb on - strand, within PfGW456L13_732 at 832.043 kb on - strand, within PfGW456L13_732 at 832.043 kb on - strand, within PfGW456L13_732 at 832.043 kb on - strand, within PfGW456L13_732 at 832.043 kb on - strand, within PfGW456L13_732 at 832.043 kb on - strand, within PfGW456L13_732 at 832.105 kb on + strand, within PfGW456L13_732 at 832.105 kb on + strand, within PfGW456L13_732 at 832.105 kb on + strand, within PfGW456L13_732 at 832.105 kb on + strand, within PfGW456L13_732 at 832.105 kb on + strand, within PfGW456L13_732 at 832.106 kb on - strand, within PfGW456L13_732 at 832.106 kb on - strand, within PfGW456L13_732 at 832.106 kb on - strand, within PfGW456L13_732 at 832.106 kb on - strand, within PfGW456L13_732 at 832.192 kb on + strand, within PfGW456L13_732 at 832.192 kb on + strand, within PfGW456L13_732 at 832.192 kb on + strand, within PfGW456L13_732 at 832.236 kb on + strand, within PfGW456L13_732 at 832.236 kb on + strand, within PfGW456L13_732 at 832.237 kb on - strand, within PfGW456L13_732 at 832.237 kb on - strand, within PfGW456L13_732 at 832.237 kb on - strand, within PfGW456L13_732 at 832.279 kb on - strand, within PfGW456L13_732 at 832.351 kb on + strand at 832.351 kb on + strand at 832.351 kb on + strand at 832.351 kb on + strand at 832.352 kb on - strand at 832.352 kb on - strand at 832.352 kb on - strand at 832.361 kb on + strand at 832.361 kb on + strand at 832.388 kb on + strand at 832.389 kb on - strand at 832.389 kb on - strand at 832.389 kb on - strand at 832.389 kb on - strand at 832.398 kb on - strand at 832.411 kb on - strand at 832.421 kb on - strand at 832.435 kb on + strand at 832.436 kb on - strand at 832.453 kb on + strand at 832.453 kb on + strand at 832.454 kb on - strand at 832.529 kb on + strand at 832.530 kb on - strand at 832.530 kb on - strand at 832.646 kb on + strand, within PfGW456L13_733 at 832.658 kb on + strand, within PfGW456L13_733 at 832.658 kb on + strand, within PfGW456L13_733 at 832.658 kb on + strand, within PfGW456L13_733 at 832.659 kb on - strand, within PfGW456L13_733 at 832.659 kb on - strand, within PfGW456L13_733 at 832.659 kb on - strand, within PfGW456L13_733 at 832.659 kb on - strand, within PfGW456L13_733 at 832.659 kb on - strand, within PfGW456L13_733 at 832.700 kb on + strand, within PfGW456L13_733 at 832.700 kb on + strand, within PfGW456L13_733 at 832.700 kb on + strand, within PfGW456L13_733 at 832.700 kb on + strand, within PfGW456L13_733 at 832.700 kb on + strand, within PfGW456L13_733 at 832.700 kb on + strand, within PfGW456L13_733 at 832.700 kb on + strand, within PfGW456L13_733 at 832.700 kb on + strand, within PfGW456L13_733 at 832.700 kb on + strand, within PfGW456L13_733 at 832.700 kb on + strand, within PfGW456L13_733 at 832.700 kb on + strand, within PfGW456L13_733 at 832.700 kb on + strand, within PfGW456L13_733 at 832.700 kb on + strand, within PfGW456L13_733 at 832.700 kb on + strand, within PfGW456L13_733 at 832.700 kb on + strand, within PfGW456L13_733 at 832.700 kb on + strand, within PfGW456L13_733 at 832.700 kb on + strand, within PfGW456L13_733 at 832.700 kb on + strand, within PfGW456L13_733 at 832.700 kb on + strand, within PfGW456L13_733 at 832.700 kb on + strand, within PfGW456L13_733 at 832.701 kb on - strand, within PfGW456L13_733 at 832.701 kb on - strand, within PfGW456L13_733 at 832.701 kb on - strand, within PfGW456L13_733 at 832.701 kb on - strand, within PfGW456L13_733 at 832.701 kb on - strand, within PfGW456L13_733 at 832.701 kb on - strand, within PfGW456L13_733 at 832.701 kb on - strand, within PfGW456L13_733 at 832.701 kb on - strand, within PfGW456L13_733 at 832.701 kb on - strand, within PfGW456L13_733 at 832.701 kb on - strand, within PfGW456L13_733 at 832.701 kb on - strand, within PfGW456L13_733 at 832.701 kb on - strand, within PfGW456L13_733 at 832.701 kb on - strand, within PfGW456L13_733 at 832.701 kb on - strand, within PfGW456L13_733 at 832.701 kb on - strand, within PfGW456L13_733 at 832.701 kb on - strand, within PfGW456L13_733
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 830,335 + +0.3 830,336 - -3.3 830,336 - -3.4 830,347 + -2.9 830,348 - -2.6 830,357 + -1.4 830,357 + -0.5 830,357 + -1.9 830,357 + -3.3 830,357 + -1.5 830,358 - -4.1 830,358 - -4.0 830,358 - -0.6 830,358 - -4.2 830,359 + -0.1 830,360 - -4.3 830,360 - -2.7 830,390 + +0.6 830,390 + -0.1 830,390 + +0.5 830,538 + -1.6 830,538 + -0.0 830,538 + -0.0 830,539 - -2.3 830,539 - -3.7 830,539 - -2.0 830,539 - +0.4 830,569 - -2.2 830,569 - -2.2 830,789 + PfGW456L13_730 0.30 +0.2 830,789 + PfGW456L13_730 0.30 +1.2 830,870 + PfGW456L13_730 0.42 -0.1 830,871 - PfGW456L13_730 0.42 -3.0 831,020 + PfGW456L13_730 0.64 +0.7 831,021 - PfGW456L13_730 0.65 -1.4 831,098 + PfGW456L13_730 0.76 +0.0 831,098 + PfGW456L13_730 0.76 -1.4 831,099 - PfGW456L13_730 0.76 -0.3 831,099 - PfGW456L13_730 0.76 -1.8 831,099 - PfGW456L13_730 0.76 -0.4 831,191 + -0.1 831,191 + -0.7 831,191 + +1.4 831,191 + -3.3 831,192 - -3.2 831,192 - +0.5 831,192 - -0.6 831,192 - -3.3 831,192 - +0.1 831,192 - +0.4 831,276 + -1.9 831,276 + -0.6 831,276 + -0.7 831,276 + +0.5 831,276 + +0.3 831,276 + -0.9 831,276 + +1.7 831,276 + +1.9 831,276 + -0.7 831,276 + -1.0 831,276 + +1.3 831,276 + +1.5 831,276 + +1.1 831,276 + -3.5 831,276 + +0.5 831,276 + +1.7 831,276 + -0.5 831,277 - -1.8 831,277 - -4.0 831,277 - -1.6 831,277 - +0.0 831,277 - -1.2 831,277 - -1.2 831,277 - -3.0 831,277 - +0.4 831,277 - -0.6 831,277 - -2.5 831,277 - -3.1 831,277 - -2.5 831,277 - +0.2 831,277 - -0.8 831,277 - -2.4 831,277 - -1.6 831,278 + +0.4 831,278 + +0.1 831,278 + -1.4 831,278 + -0.8 831,278 + +0.0 831,278 + +0.1 831,279 - -2.1 831,279 - -1.0 831,327 + PfGW456L13_731 0.12 -1.3 831,405 + PfGW456L13_731 0.29 +1.5 831,405 + PfGW456L13_731 0.29 +0.3 831,477 + +1.4 831,477 + PfGW456L13_731 0.45 -0.9 831,478 - PfGW456L13_731 0.45 -0.9 831,478 - PfGW456L13_731 0.45 -2.9 831,513 + PfGW456L13_731 0.53 +0.2 831,513 + PfGW456L13_731 0.53 +1.4 831,513 + PfGW456L13_731 0.53 -0.3 831,513 + PfGW456L13_731 0.53 -0.0 831,513 + PfGW456L13_731 0.53 +2.9 831,513 + PfGW456L13_731 0.53 +0.7 831,514 - PfGW456L13_731 0.53 -0.3 831,514 - PfGW456L13_731 0.53 -1.1 831,514 - PfGW456L13_731 0.53 +0.3 831,514 - PfGW456L13_731 0.53 -2.7 831,514 - -0.2 831,514 - PfGW456L13_731 0.53 -1.4 831,639 + PfGW456L13_731 0.81 -0.4 831,639 + PfGW456L13_731 0.81 +0.3 831,639 + PfGW456L13_731 0.81 +0.6 831,639 + PfGW456L13_731 0.81 +0.5 831,640 - PfGW456L13_731 0.82 -0.8 831,640 - PfGW456L13_731 0.82 +0.7 831,640 - PfGW456L13_731 0.82 -0.4 831,651 + PfGW456L13_731 0.84 -0.3 831,652 - PfGW456L13_731 0.84 -2.4 831,652 - PfGW456L13_731 0.84 -0.0 831,904 + PfGW456L13_732 0.28 +0.1 831,904 + PfGW456L13_732 0.28 +0.2 831,904 + PfGW456L13_732 0.28 +0.2 831,905 - PfGW456L13_732 0.28 -3.5 831,905 - PfGW456L13_732 0.28 -2.3 831,905 - PfGW456L13_732 0.28 +0.6 832,024 + PfGW456L13_732 0.47 +0.3 832,032 + PfGW456L13_732 0.48 +1.9 832,042 + PfGW456L13_732 0.50 +0.3 832,042 + PfGW456L13_732 0.50 -0.3 832,042 + PfGW456L13_732 0.50 +0.4 832,042 + PfGW456L13_732 0.50 +1.4 832,042 + PfGW456L13_732 0.50 +1.5 832,042 + PfGW456L13_732 0.50 -0.5 832,042 + PfGW456L13_732 0.50 +2.3 832,042 + PfGW456L13_732 0.50 -2.1 832,042 + PfGW456L13_732 0.50 +0.5 832,042 + PfGW456L13_732 0.50 +0.2 832,042 + PfGW456L13_732 0.50 +0.2 832,042 + PfGW456L13_732 0.50 +0.2 832,042 + PfGW456L13_732 0.50 +0.7 832,043 - PfGW456L13_732 0.50 -2.3 832,043 - PfGW456L13_732 0.50 -0.5 832,043 - PfGW456L13_732 0.50 -0.2 832,043 - PfGW456L13_732 0.50 +0.1 832,043 - PfGW456L13_732 0.50 -2.9 832,043 - PfGW456L13_732 0.50 -1.5 832,043 - PfGW456L13_732 0.50 -1.6 832,043 - PfGW456L13_732 0.50 -2.3 832,043 - PfGW456L13_732 0.50 +0.0 832,043 - PfGW456L13_732 0.50 -2.9 832,043 - PfGW456L13_732 0.50 -1.6 832,043 - PfGW456L13_732 0.50 -1.4 832,043 - PfGW456L13_732 0.50 +0.7 832,043 - PfGW456L13_732 0.50 +0.4 832,105 + PfGW456L13_732 0.60 +1.1 832,105 + PfGW456L13_732 0.60 +0.8 832,105 + PfGW456L13_732 0.60 +0.5 832,105 + PfGW456L13_732 0.60 +0.0 832,105 + PfGW456L13_732 0.60 +0.6 832,106 - PfGW456L13_732 0.60 -0.9 832,106 - PfGW456L13_732 0.60 -0.8 832,106 - PfGW456L13_732 0.60 +1.2 832,106 - PfGW456L13_732 0.60 +1.4 832,192 + PfGW456L13_732 0.74 -0.8 832,192 + PfGW456L13_732 0.74 -1.7 832,192 + PfGW456L13_732 0.74 +1.7 832,236 + PfGW456L13_732 0.81 +0.2 832,236 + PfGW456L13_732 0.81 -0.9 832,237 - PfGW456L13_732 0.81 -0.5 832,237 - PfGW456L13_732 0.81 +0.1 832,237 - PfGW456L13_732 0.81 +0.2 832,279 - PfGW456L13_732 0.88 -0.7 832,351 + -1.6 832,351 + +1.3 832,351 + +1.8 832,351 + -0.9 832,352 - +0.7 832,352 - +0.2 832,352 - -3.8 832,361 + +0.2 832,361 + +0.6 832,388 + +0.6 832,389 - -1.8 832,389 - +0.2 832,389 - -0.6 832,389 - -3.9 832,398 - +1.4 832,411 - -2.9 832,421 - -3.1 832,435 + -1.7 832,436 - -1.9 832,453 + -0.6 832,453 + +1.4 832,454 - -2.0 832,529 + +0.9 832,530 - -0.9 832,530 - -4.5 832,646 + PfGW456L13_733 0.13 -0.0 832,658 + PfGW456L13_733 0.14 +0.2 832,658 + PfGW456L13_733 0.14 -1.8 832,658 + PfGW456L13_733 0.14 -0.3 832,659 - PfGW456L13_733 0.14 +0.4 832,659 - PfGW456L13_733 0.14 -3.1 832,659 - PfGW456L13_733 0.14 -2.4 832,659 - PfGW456L13_733 0.14 -1.5 832,659 - PfGW456L13_733 0.14 -0.1 832,700 + PfGW456L13_733 0.16 +0.7 832,700 + PfGW456L13_733 0.16 -1.2 832,700 + PfGW456L13_733 0.16 +1.9 832,700 + PfGW456L13_733 0.16 -0.6 832,700 + PfGW456L13_733 0.16 +0.8 832,700 + PfGW456L13_733 0.16 +0.7 832,700 + PfGW456L13_733 0.16 +0.9 832,700 + PfGW456L13_733 0.16 +2.1 832,700 + PfGW456L13_733 0.16 +0.1 832,700 + PfGW456L13_733 0.16 -1.9 832,700 + PfGW456L13_733 0.16 +1.9 832,700 + PfGW456L13_733 0.16 -0.7 832,700 + PfGW456L13_733 0.16 -0.2 832,700 + PfGW456L13_733 0.16 +0.9 832,700 + PfGW456L13_733 0.16 +0.3 832,700 + PfGW456L13_733 0.16 +0.7 832,700 + PfGW456L13_733 0.16 -2.3 832,700 + PfGW456L13_733 0.16 +0.6 832,700 + PfGW456L13_733 0.16 +1.4 832,700 + PfGW456L13_733 0.16 -0.0 832,701 - PfGW456L13_733 0.16 -0.2 832,701 - PfGW456L13_733 0.16 -1.5 832,701 - PfGW456L13_733 0.16 -2.1 832,701 - PfGW456L13_733 0.16 -2.8 832,701 - PfGW456L13_733 0.16 -0.9 832,701 - PfGW456L13_733 0.16 -2.0 832,701 - PfGW456L13_733 0.16 -1.8 832,701 - PfGW456L13_733 0.16 +0.8 832,701 - PfGW456L13_733 0.16 -3.2 832,701 - PfGW456L13_733 0.16 -1.6 832,701 - PfGW456L13_733 0.16 -2.4 832,701 - PfGW456L13_733 0.16 -1.1 832,701 - PfGW456L13_733 0.16 -3.3 832,701 - PfGW456L13_733 0.16 -1.4 832,701 - PfGW456L13_733 0.16 -2.9 832,701 - PfGW456L13_733 0.16 -2.5
Or see this region's nucleotide sequence