Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_698 and PfGW456L13_699 are separated by 187 nucleotides PfGW456L13_699 and PfGW456L13_700 overlap by 4 nucleotides
PfGW456L13_698 - Dihydrolipoamide dehydrogenase (EC 1.8.1.4), at 793,575 to 794,975
_698
PfGW456L13_699 - Membrane protease subunits, stomatin/prohibitin homologs, at 795,163 to 797,148
_699
PfGW456L13_700 - HflC protein, at 797,145 to 798,182
_700
Position (kb) 795
796
797
798 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 794.172 kb on + strand, within PfGW456L13_698 at 794.172 kb on + strand, within PfGW456L13_698 at 794.172 kb on + strand, within PfGW456L13_698 at 794.172 kb on + strand, within PfGW456L13_698 at 794.173 kb on - strand, within PfGW456L13_698 at 794.173 kb on - strand, within PfGW456L13_698 at 794.173 kb on - strand, within PfGW456L13_698 at 794.176 kb on + strand, within PfGW456L13_698 at 794.176 kb on + strand, within PfGW456L13_698 at 794.176 kb on + strand, within PfGW456L13_698 at 794.176 kb on + strand, within PfGW456L13_698 at 794.176 kb on + strand, within PfGW456L13_698 at 794.176 kb on + strand, within PfGW456L13_698 at 794.176 kb on + strand, within PfGW456L13_698 at 794.176 kb on + strand, within PfGW456L13_698 at 794.177 kb on - strand, within PfGW456L13_698 at 794.442 kb on + strand, within PfGW456L13_698 at 794.442 kb on + strand, within PfGW456L13_698 at 794.509 kb on - strand, within PfGW456L13_698 at 794.531 kb on + strand, within PfGW456L13_698 at 794.531 kb on + strand, within PfGW456L13_698 at 794.532 kb on - strand, within PfGW456L13_698 at 794.532 kb on - strand, within PfGW456L13_698 at 794.532 kb on - strand, within PfGW456L13_698 at 794.663 kb on + strand, within PfGW456L13_698 at 794.797 kb on + strand, within PfGW456L13_698 at 794.798 kb on - strand, within PfGW456L13_698 at 794.798 kb on - strand, within PfGW456L13_698 at 794.798 kb on - strand, within PfGW456L13_698 at 794.798 kb on - strand, within PfGW456L13_698 at 794.929 kb on + strand at 794.930 kb on - strand at 794.930 kb on - strand at 794.952 kb on + strand at 794.953 kb on - strand at 794.965 kb on + strand at 794.965 kb on + strand at 794.965 kb on + strand at 794.965 kb on + strand at 794.965 kb on + strand at 794.965 kb on + strand at 794.965 kb on + strand at 794.965 kb on + strand at 794.966 kb on - strand at 794.966 kb on - strand at 794.966 kb on - strand at 794.966 kb on - strand at 794.966 kb on - strand at 794.966 kb on - strand at 794.966 kb on - strand at 794.981 kb on + strand at 794.981 kb on + strand at 794.981 kb on + strand at 794.981 kb on + strand at 794.981 kb on + strand at 794.981 kb on + strand at 794.981 kb on + strand at 794.981 kb on + strand at 794.981 kb on + strand at 794.982 kb on - strand at 794.982 kb on - strand at 794.982 kb on - strand at 794.982 kb on - strand at 794.982 kb on - strand at 794.982 kb on - strand at 794.982 kb on - strand at 794.982 kb on - strand at 795.011 kb on + strand at 795.011 kb on + strand at 795.011 kb on + strand at 795.017 kb on + strand at 795.017 kb on + strand at 795.017 kb on + strand at 795.017 kb on + strand at 795.017 kb on + strand at 795.018 kb on - strand at 795.018 kb on - strand at 795.042 kb on + strand at 795.043 kb on - strand at 795.045 kb on + strand at 795.104 kb on + strand at 795.104 kb on + strand at 795.104 kb on + strand at 795.104 kb on + strand at 795.104 kb on + strand at 795.105 kb on - strand at 795.105 kb on - strand at 795.105 kb on - strand at 795.105 kb on - strand at 795.105 kb on - strand at 795.105 kb on - strand at 795.105 kb on - strand at 795.189 kb on + strand at 795.189 kb on + strand at 795.189 kb on + strand at 795.189 kb on + strand at 795.190 kb on - strand at 795.190 kb on - strand at 795.190 kb on - strand at 795.311 kb on + strand at 795.311 kb on + strand at 795.311 kb on + strand at 795.311 kb on + strand at 795.312 kb on - strand at 795.312 kb on - strand at 795.312 kb on - strand at 795.514 kb on + strand, within PfGW456L13_699 at 795.514 kb on + strand, within PfGW456L13_699 at 795.514 kb on + strand, within PfGW456L13_699 at 795.514 kb on + strand, within PfGW456L13_699 at 795.515 kb on - strand, within PfGW456L13_699 at 795.515 kb on - strand, within PfGW456L13_699 at 795.515 kb on - strand, within PfGW456L13_699 at 795.515 kb on - strand, within PfGW456L13_699 at 795.515 kb on - strand, within PfGW456L13_699 at 795.515 kb on - strand, within PfGW456L13_699 at 795.515 kb on - strand, within PfGW456L13_699 at 795.515 kb on - strand, within PfGW456L13_699 at 795.515 kb on - strand, within PfGW456L13_699 at 795.560 kb on + strand, within PfGW456L13_699 at 795.774 kb on + strand, within PfGW456L13_699 at 795.977 kb on + strand, within PfGW456L13_699 at 795.978 kb on - strand, within PfGW456L13_699 at 795.978 kb on - strand, within PfGW456L13_699 at 795.978 kb on - strand, within PfGW456L13_699 at 796.037 kb on + strand, within PfGW456L13_699 at 796.096 kb on + strand, within PfGW456L13_699 at 796.096 kb on + strand, within PfGW456L13_699 at 796.097 kb on - strand, within PfGW456L13_699 at 796.097 kb on - strand, within PfGW456L13_699 at 796.097 kb on - strand, within PfGW456L13_699 at 796.097 kb on - strand, within PfGW456L13_699 at 796.195 kb on + strand, within PfGW456L13_699 at 796.195 kb on + strand, within PfGW456L13_699 at 796.195 kb on + strand, within PfGW456L13_699 at 796.196 kb on - strand, within PfGW456L13_699 at 796.196 kb on - strand, within PfGW456L13_699 at 796.196 kb on - strand, within PfGW456L13_699 at 796.196 kb on - strand, within PfGW456L13_699 at 796.296 kb on - strand, within PfGW456L13_699 at 796.487 kb on - strand, within PfGW456L13_699 at 796.528 kb on + strand, within PfGW456L13_699 at 796.528 kb on + strand, within PfGW456L13_699 at 796.528 kb on + strand, within PfGW456L13_699 at 796.528 kb on + strand, within PfGW456L13_699 at 796.528 kb on + strand, within PfGW456L13_699 at 796.528 kb on + strand, within PfGW456L13_699 at 796.528 kb on + strand, within PfGW456L13_699 at 796.528 kb on + strand, within PfGW456L13_699 at 796.528 kb on + strand, within PfGW456L13_699 at 796.528 kb on + strand, within PfGW456L13_699 at 796.529 kb on - strand, within PfGW456L13_699 at 796.529 kb on - strand, within PfGW456L13_699 at 796.529 kb on - strand, within PfGW456L13_699 at 796.529 kb on - strand, within PfGW456L13_699 at 796.529 kb on - strand, within PfGW456L13_699 at 796.529 kb on - strand, within PfGW456L13_699 at 796.529 kb on - strand, within PfGW456L13_699 at 796.530 kb on + strand, within PfGW456L13_699 at 796.530 kb on + strand, within PfGW456L13_699 at 796.530 kb on + strand, within PfGW456L13_699 at 796.544 kb on + strand, within PfGW456L13_699 at 796.544 kb on + strand, within PfGW456L13_699 at 796.544 kb on + strand at 796.544 kb on + strand, within PfGW456L13_699 at 796.545 kb on - strand, within PfGW456L13_699 at 796.545 kb on - strand, within PfGW456L13_699 at 796.545 kb on - strand, within PfGW456L13_699 at 796.545 kb on - strand, within PfGW456L13_699 at 796.756 kb on + strand, within PfGW456L13_699 at 796.757 kb on - strand, within PfGW456L13_699 at 796.830 kb on + strand, within PfGW456L13_699 at 796.830 kb on + strand, within PfGW456L13_699 at 796.831 kb on - strand, within PfGW456L13_699 at 796.948 kb on + strand, within PfGW456L13_699 at 796.948 kb on + strand, within PfGW456L13_699 at 796.948 kb on + strand, within PfGW456L13_699 at 796.948 kb on + strand, within PfGW456L13_699 at 796.949 kb on - strand, within PfGW456L13_699 at 796.949 kb on - strand, within PfGW456L13_699 at 796.984 kb on + strand at 796.985 kb on - strand at 796.985 kb on - strand at 796.985 kb on - strand at 796.985 kb on - strand at 796.985 kb on - strand at 796.985 kb on - strand at 796.985 kb on - strand at 796.985 kb on - strand at 797.082 kb on + strand at 797.082 kb on + strand at 797.082 kb on + strand at 797.082 kb on + strand at 797.082 kb on + strand at 797.083 kb on - strand at 797.460 kb on - strand, within PfGW456L13_700 at 797.523 kb on + strand, within PfGW456L13_700 at 797.523 kb on + strand, within PfGW456L13_700 at 797.524 kb on - strand, within PfGW456L13_700 at 797.524 kb on - strand, within PfGW456L13_700 at 797.524 kb on - strand, within PfGW456L13_700 at 797.524 kb on - strand, within PfGW456L13_700 at 797.681 kb on + strand, within PfGW456L13_700 at 797.681 kb on + strand, within PfGW456L13_700 at 797.682 kb on - strand, within PfGW456L13_700 at 797.682 kb on - strand, within PfGW456L13_700 at 797.682 kb on - strand, within PfGW456L13_700 at 797.698 kb on + strand, within PfGW456L13_700 at 797.699 kb on - strand, within PfGW456L13_700 at 797.737 kb on + strand, within PfGW456L13_700 at 797.737 kb on + strand, within PfGW456L13_700 at 797.737 kb on + strand, within PfGW456L13_700 at 797.737 kb on + strand, within PfGW456L13_700 at 797.738 kb on - strand, within PfGW456L13_700 at 797.738 kb on - strand, within PfGW456L13_700 at 797.738 kb on - strand, within PfGW456L13_700 at 797.738 kb on - strand, within PfGW456L13_700 at 797.738 kb on - strand, within PfGW456L13_700 at 797.760 kb on + strand, within PfGW456L13_700 at 797.760 kb on + strand, within PfGW456L13_700 at 797.760 kb on + strand, within PfGW456L13_700 at 797.760 kb on + strand, within PfGW456L13_700 at 797.760 kb on + strand, within PfGW456L13_700 at 797.760 kb on + strand, within PfGW456L13_700 at 797.760 kb on + strand, within PfGW456L13_700 at 797.760 kb on + strand, within PfGW456L13_700 at 797.760 kb on + strand, within PfGW456L13_700 at 797.760 kb on + strand, within PfGW456L13_700 at 797.760 kb on + strand, within PfGW456L13_700 at 797.760 kb on + strand, within PfGW456L13_700 at 797.760 kb on + strand, within PfGW456L13_700 at 797.760 kb on + strand, within PfGW456L13_700 at 797.761 kb on - strand, within PfGW456L13_700 at 797.761 kb on - strand, within PfGW456L13_700 at 797.761 kb on - strand, within PfGW456L13_700 at 797.761 kb on - strand, within PfGW456L13_700 at 797.761 kb on - strand, within PfGW456L13_700 at 797.761 kb on - strand, within PfGW456L13_700 at 797.864 kb on + strand, within PfGW456L13_700 at 797.865 kb on - strand, within PfGW456L13_700 at 797.969 kb on + strand, within PfGW456L13_700 at 798.006 kb on + strand, within PfGW456L13_700 at 798.007 kb on - strand, within PfGW456L13_700 at 798.039 kb on + strand, within PfGW456L13_700 at 798.039 kb on + strand, within PfGW456L13_700 at 798.040 kb on - strand, within PfGW456L13_700 at 798.040 kb on - strand, within PfGW456L13_700
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 794,172 + PfGW456L13_698 0.43 +0.9 794,172 + PfGW456L13_698 0.43 +0.7 794,172 + PfGW456L13_698 0.43 +0.4 794,172 + PfGW456L13_698 0.43 +0.0 794,173 - PfGW456L13_698 0.43 -1.5 794,173 - PfGW456L13_698 0.43 +0.4 794,173 - PfGW456L13_698 0.43 -1.2 794,176 + PfGW456L13_698 0.43 -0.4 794,176 + PfGW456L13_698 0.43 +1.4 794,176 + PfGW456L13_698 0.43 +1.0 794,176 + PfGW456L13_698 0.43 +1.3 794,176 + PfGW456L13_698 0.43 -2.6 794,176 + PfGW456L13_698 0.43 -0.7 794,176 + PfGW456L13_698 0.43 +0.4 794,176 + PfGW456L13_698 0.43 +0.7 794,177 - PfGW456L13_698 0.43 -0.4 794,442 + PfGW456L13_698 0.62 +0.1 794,442 + PfGW456L13_698 0.62 -0.4 794,509 - PfGW456L13_698 0.67 -1.4 794,531 + PfGW456L13_698 0.68 -1.7 794,531 + PfGW456L13_698 0.68 +0.8 794,532 - PfGW456L13_698 0.68 +0.5 794,532 - PfGW456L13_698 0.68 +0.1 794,532 - PfGW456L13_698 0.68 -0.4 794,663 + PfGW456L13_698 0.78 -0.7 794,797 + PfGW456L13_698 0.87 +0.8 794,798 - PfGW456L13_698 0.87 -2.4 794,798 - PfGW456L13_698 0.87 +0.5 794,798 - PfGW456L13_698 0.87 -0.3 794,798 - PfGW456L13_698 0.87 +0.4 794,929 + +0.3 794,930 - +1.0 794,930 - +0.3 794,952 + -0.7 794,953 - +1.0 794,965 + -2.0 794,965 + +0.9 794,965 + +0.2 794,965 + +0.1 794,965 + +1.0 794,965 + +0.6 794,965 + +0.8 794,965 + +1.0 794,966 - +0.1 794,966 - +0.8 794,966 - +0.5 794,966 - +0.4 794,966 - -0.4 794,966 - -2.6 794,966 - +1.2 794,981 + -3.1 794,981 + +1.4 794,981 + +0.6 794,981 + +0.5 794,981 + +0.1 794,981 + +1.7 794,981 + +1.0 794,981 + +0.8 794,981 + +0.2 794,982 - +0.4 794,982 - -0.7 794,982 - -0.3 794,982 - -2.2 794,982 - -2.6 794,982 - -0.9 794,982 - -0.0 794,982 - +0.6 795,011 + -2.5 795,011 + -1.4 795,011 + +0.3 795,017 + -0.9 795,017 + -1.0 795,017 + -0.4 795,017 + -0.5 795,017 + -0.7 795,018 - +0.6 795,018 - +0.1 795,042 + +1.4 795,043 - +0.1 795,045 + -0.3 795,104 + -3.2 795,104 + +0.5 795,104 + +0.1 795,104 + +2.1 795,104 + -1.3 795,105 - +0.2 795,105 - +0.3 795,105 - -1.1 795,105 - +1.6 795,105 - +1.0 795,105 - -0.4 795,105 - -2.7 795,189 + +1.3 795,189 + -0.5 795,189 + +0.3 795,189 + +0.8 795,190 - -0.0 795,190 - +0.8 795,190 - -0.2 795,311 + -0.5 795,311 + -0.6 795,311 + -0.9 795,311 + +0.3 795,312 - +0.0 795,312 - -0.7 795,312 - +0.1 795,514 + PfGW456L13_699 0.18 +0.2 795,514 + PfGW456L13_699 0.18 -0.2 795,514 + PfGW456L13_699 0.18 -0.8 795,514 + PfGW456L13_699 0.18 +1.5 795,515 - PfGW456L13_699 0.18 -1.7 795,515 - PfGW456L13_699 0.18 -2.2 795,515 - PfGW456L13_699 0.18 -2.8 795,515 - PfGW456L13_699 0.18 +0.5 795,515 - PfGW456L13_699 0.18 +1.8 795,515 - PfGW456L13_699 0.18 -3.1 795,515 - PfGW456L13_699 0.18 -0.1 795,515 - PfGW456L13_699 0.18 +0.1 795,515 - PfGW456L13_699 0.18 +1.0 795,560 + PfGW456L13_699 0.20 -0.2 795,774 + PfGW456L13_699 0.31 +0.2 795,977 + PfGW456L13_699 0.41 -0.3 795,978 - PfGW456L13_699 0.41 +0.3 795,978 - PfGW456L13_699 0.41 +1.1 795,978 - PfGW456L13_699 0.41 +0.9 796,037 + PfGW456L13_699 0.44 +0.8 796,096 + PfGW456L13_699 0.47 -2.0 796,096 + PfGW456L13_699 0.47 +1.3 796,097 - PfGW456L13_699 0.47 -1.9 796,097 - PfGW456L13_699 0.47 +0.4 796,097 - PfGW456L13_699 0.47 -1.6 796,097 - PfGW456L13_699 0.47 -2.7 796,195 + PfGW456L13_699 0.52 -0.2 796,195 + PfGW456L13_699 0.52 +0.6 796,195 + PfGW456L13_699 0.52 +0.4 796,196 - PfGW456L13_699 0.52 -0.8 796,196 - PfGW456L13_699 0.52 -0.7 796,196 - PfGW456L13_699 0.52 +0.1 796,196 - PfGW456L13_699 0.52 +0.8 796,296 - PfGW456L13_699 0.57 +1.4 796,487 - PfGW456L13_699 0.67 +0.7 796,528 + PfGW456L13_699 0.69 -1.0 796,528 + PfGW456L13_699 0.69 -0.6 796,528 + PfGW456L13_699 0.69 -3.4 796,528 + PfGW456L13_699 0.69 +0.0 796,528 + PfGW456L13_699 0.69 -1.6 796,528 + PfGW456L13_699 0.69 -0.7 796,528 + PfGW456L13_699 0.69 +0.6 796,528 + PfGW456L13_699 0.69 -1.3 796,528 + PfGW456L13_699 0.69 -0.9 796,528 + PfGW456L13_699 0.69 +0.3 796,529 - PfGW456L13_699 0.69 +0.6 796,529 - PfGW456L13_699 0.69 +1.4 796,529 - PfGW456L13_699 0.69 +0.3 796,529 - PfGW456L13_699 0.69 +0.8 796,529 - PfGW456L13_699 0.69 +1.7 796,529 - PfGW456L13_699 0.69 +1.6 796,529 - PfGW456L13_699 0.69 -0.4 796,530 + PfGW456L13_699 0.69 +1.3 796,530 + PfGW456L13_699 0.69 -1.3 796,530 + PfGW456L13_699 0.69 -0.2 796,544 + PfGW456L13_699 0.70 +0.1 796,544 + PfGW456L13_699 0.70 +0.7 796,544 + +1.7 796,544 + PfGW456L13_699 0.70 +0.4 796,545 - PfGW456L13_699 0.70 +1.8 796,545 - PfGW456L13_699 0.70 -1.2 796,545 - PfGW456L13_699 0.70 +0.1 796,545 - PfGW456L13_699 0.70 -3.3 796,756 + PfGW456L13_699 0.80 +1.1 796,757 - PfGW456L13_699 0.80 +0.8 796,830 + PfGW456L13_699 0.84 +0.2 796,830 + PfGW456L13_699 0.84 -1.3 796,831 - PfGW456L13_699 0.84 -0.0 796,948 + PfGW456L13_699 0.90 +2.0 796,948 + PfGW456L13_699 0.90 +1.0 796,948 + PfGW456L13_699 0.90 -0.3 796,948 + PfGW456L13_699 0.90 -0.3 796,949 - PfGW456L13_699 0.90 +0.9 796,949 - PfGW456L13_699 0.90 +0.9 796,984 + +3.3 796,985 - -0.1 796,985 - +0.2 796,985 - +0.1 796,985 - -0.2 796,985 - -0.3 796,985 - -1.2 796,985 - -0.4 796,985 - -0.6 797,082 + +0.3 797,082 + -0.8 797,082 + -0.3 797,082 + +1.1 797,082 + -0.4 797,083 - +0.5 797,460 - PfGW456L13_700 0.30 +0.1 797,523 + PfGW456L13_700 0.36 +0.9 797,523 + PfGW456L13_700 0.36 -0.8 797,524 - PfGW456L13_700 0.37 +0.7 797,524 - PfGW456L13_700 0.37 -0.4 797,524 - PfGW456L13_700 0.37 -0.3 797,524 - PfGW456L13_700 0.37 -1.5 797,681 + PfGW456L13_700 0.52 +0.8 797,681 + PfGW456L13_700 0.52 -1.5 797,682 - PfGW456L13_700 0.52 -0.3 797,682 - PfGW456L13_700 0.52 +0.6 797,682 - PfGW456L13_700 0.52 -0.6 797,698 + PfGW456L13_700 0.53 +1.0 797,699 - PfGW456L13_700 0.53 +0.3 797,737 + PfGW456L13_700 0.57 +0.9 797,737 + PfGW456L13_700 0.57 -1.9 797,737 + PfGW456L13_700 0.57 +0.3 797,737 + PfGW456L13_700 0.57 +0.0 797,738 - PfGW456L13_700 0.57 -0.6 797,738 - PfGW456L13_700 0.57 -0.7 797,738 - PfGW456L13_700 0.57 -1.5 797,738 - PfGW456L13_700 0.57 -0.2 797,738 - PfGW456L13_700 0.57 -0.4 797,760 + PfGW456L13_700 0.59 -0.3 797,760 + PfGW456L13_700 0.59 -0.6 797,760 + PfGW456L13_700 0.59 +0.9 797,760 + PfGW456L13_700 0.59 +0.5 797,760 + PfGW456L13_700 0.59 +0.5 797,760 + PfGW456L13_700 0.59 +0.1 797,760 + PfGW456L13_700 0.59 +0.7 797,760 + PfGW456L13_700 0.59 +0.5 797,760 + PfGW456L13_700 0.59 -1.6 797,760 + PfGW456L13_700 0.59 -0.8 797,760 + PfGW456L13_700 0.59 +0.5 797,760 + PfGW456L13_700 0.59 -1.2 797,760 + PfGW456L13_700 0.59 +0.1 797,760 + PfGW456L13_700 0.59 -0.1 797,761 - PfGW456L13_700 0.59 +0.4 797,761 - PfGW456L13_700 0.59 +0.1 797,761 - PfGW456L13_700 0.59 -0.6 797,761 - PfGW456L13_700 0.59 -1.0 797,761 - PfGW456L13_700 0.59 +0.8 797,761 - PfGW456L13_700 0.59 -1.2 797,864 + PfGW456L13_700 0.69 +0.0 797,865 - PfGW456L13_700 0.69 +0.9 797,969 + PfGW456L13_700 0.79 +1.0 798,006 + PfGW456L13_700 0.83 +0.0 798,007 - PfGW456L13_700 0.83 -1.0 798,039 + PfGW456L13_700 0.86 -0.2 798,039 + PfGW456L13_700 0.86 +0.2 798,040 - PfGW456L13_700 0.86 -0.6 798,040 - PfGW456L13_700 0.86 +0.3
Or see this region's nucleotide sequence