Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_65 and PfGW456L13_66 overlap by 4 nucleotides PfGW456L13_66 and PfGW456L13_67 overlap by 8 nucleotides PfGW456L13_67 and PfGW456L13_68 are separated by 792 nucleotides
PfGW456L13_65 - Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130), at 76,492 to 77,226
_65
PfGW456L13_66 - Cobalt-precorrin-8x methylmutase (EC 5.4.1.2), at 77,223 to 77,849
_66
PfGW456L13_67 - Cobalamin biosynthesis protein CobG, at 77,842 to 79,113
_67
PfGW456L13_68 - hypothetical protein, at 79,906 to 80,049
_68
Position (kb) 77
78
79
80 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 76.868 kb on + strand, within PfGW456L13_65 at 76.868 kb on + strand, within PfGW456L13_65 at 76.868 kb on + strand, within PfGW456L13_65 at 76.868 kb on + strand, within PfGW456L13_65 at 76.868 kb on + strand, within PfGW456L13_65 at 76.869 kb on - strand, within PfGW456L13_65 at 76.869 kb on - strand, within PfGW456L13_65 at 76.869 kb on - strand, within PfGW456L13_65 at 76.869 kb on - strand, within PfGW456L13_65 at 76.869 kb on - strand, within PfGW456L13_65 at 76.869 kb on - strand, within PfGW456L13_65 at 76.869 kb on - strand, within PfGW456L13_65 at 76.869 kb on - strand, within PfGW456L13_65 at 76.874 kb on + strand, within PfGW456L13_65 at 76.874 kb on + strand, within PfGW456L13_65 at 76.874 kb on + strand, within PfGW456L13_65 at 76.874 kb on + strand, within PfGW456L13_65 at 76.874 kb on + strand, within PfGW456L13_65 at 76.874 kb on + strand, within PfGW456L13_65 at 76.874 kb on + strand, within PfGW456L13_65 at 76.874 kb on + strand, within PfGW456L13_65 at 76.874 kb on + strand, within PfGW456L13_65 at 76.874 kb on + strand, within PfGW456L13_65 at 76.875 kb on - strand, within PfGW456L13_65 at 76.875 kb on - strand, within PfGW456L13_65 at 76.875 kb on - strand, within PfGW456L13_65 at 76.875 kb on - strand, within PfGW456L13_65 at 76.875 kb on - strand, within PfGW456L13_65 at 76.875 kb on - strand, within PfGW456L13_65 at 76.875 kb on - strand, within PfGW456L13_65 at 76.875 kb on - strand, within PfGW456L13_65 at 76.875 kb on - strand, within PfGW456L13_65 at 76.875 kb on - strand, within PfGW456L13_65 at 76.875 kb on - strand, within PfGW456L13_65 at 76.883 kb on + strand, within PfGW456L13_65 at 76.883 kb on + strand, within PfGW456L13_65 at 76.884 kb on - strand, within PfGW456L13_65 at 76.884 kb on - strand, within PfGW456L13_65 at 76.884 kb on - strand, within PfGW456L13_65 at 76.884 kb on - strand, within PfGW456L13_65 at 76.967 kb on + strand, within PfGW456L13_65 at 76.968 kb on - strand, within PfGW456L13_65 at 76.968 kb on - strand, within PfGW456L13_65 at 76.991 kb on + strand, within PfGW456L13_65 at 76.992 kb on - strand, within PfGW456L13_65 at 76.992 kb on - strand, within PfGW456L13_65 at 76.992 kb on - strand, within PfGW456L13_65 at 77.117 kb on + strand, within PfGW456L13_65 at 77.117 kb on + strand, within PfGW456L13_65 at 77.117 kb on + strand, within PfGW456L13_65 at 77.117 kb on + strand, within PfGW456L13_65 at 77.118 kb on - strand, within PfGW456L13_65 at 77.118 kb on - strand, within PfGW456L13_65 at 77.425 kb on + strand, within PfGW456L13_66 at 77.425 kb on + strand, within PfGW456L13_66 at 77.425 kb on + strand, within PfGW456L13_66 at 77.815 kb on + strand at 77.815 kb on + strand at 77.816 kb on - strand at 77.816 kb on - strand at 77.816 kb on - strand at 77.816 kb on - strand at 77.839 kb on + strand at 77.839 kb on + strand at 77.839 kb on + strand at 77.839 kb on + strand at 77.839 kb on + strand at 77.839 kb on + strand at 77.839 kb on + strand at 77.840 kb on - strand at 77.840 kb on - strand at 77.840 kb on - strand at 77.840 kb on - strand at 77.840 kb on - strand at 77.840 kb on - strand at 77.840 kb on - strand at 77.840 kb on - strand at 77.840 kb on - strand at 77.840 kb on - strand at 77.840 kb on - strand at 77.898 kb on + strand at 77.898 kb on + strand at 77.898 kb on + strand at 77.898 kb on + strand at 77.899 kb on - strand at 77.899 kb on - strand at 77.899 kb on - strand at 77.899 kb on - strand at 77.899 kb on - strand at 77.899 kb on - strand at 77.901 kb on + strand at 77.901 kb on + strand at 77.902 kb on - strand at 77.902 kb on - strand at 77.902 kb on - strand at 77.902 kb on - strand at 77.964 kb on - strand at 77.964 kb on - strand at 77.987 kb on - strand, within PfGW456L13_67 at 77.987 kb on - strand, within PfGW456L13_67 at 78.078 kb on + strand, within PfGW456L13_67 at 78.079 kb on - strand, within PfGW456L13_67 at 78.079 kb on - strand, within PfGW456L13_67 at 78.079 kb on - strand, within PfGW456L13_67 at 78.121 kb on - strand, within PfGW456L13_67 at 78.365 kb on + strand, within PfGW456L13_67 at 78.365 kb on + strand, within PfGW456L13_67 at 78.365 kb on + strand, within PfGW456L13_67 at 78.365 kb on + strand, within PfGW456L13_67 at 78.366 kb on - strand, within PfGW456L13_67 at 78.366 kb on - strand, within PfGW456L13_67 at 78.366 kb on - strand, within PfGW456L13_67 at 78.366 kb on - strand, within PfGW456L13_67 at 78.366 kb on - strand, within PfGW456L13_67 at 78.366 kb on - strand, within PfGW456L13_67 at 78.366 kb on - strand, within PfGW456L13_67 at 78.366 kb on - strand, within PfGW456L13_67 at 78.571 kb on + strand, within PfGW456L13_67 at 79.004 kb on + strand at 79.080 kb on + strand at 79.081 kb on - strand at 79.081 kb on - strand at 79.196 kb on + strand at 79.196 kb on + strand at 79.196 kb on + strand at 79.196 kb on + strand at 79.196 kb on + strand at 79.196 kb on + strand at 79.197 kb on - strand at 79.197 kb on - strand at 79.197 kb on - strand at 79.197 kb on - strand at 79.197 kb on - strand at 79.197 kb on - strand at 79.249 kb on - strand at 79.265 kb on + strand at 79.265 kb on + strand at 79.265 kb on + strand at 79.266 kb on - strand at 79.266 kb on - strand at 79.356 kb on - strand at 79.379 kb on + strand at 79.383 kb on + strand at 79.383 kb on + strand at 79.385 kb on + strand at 79.385 kb on + strand at 79.385 kb on + strand at 79.386 kb on - strand at 79.386 kb on - strand at 79.480 kb on + strand at 79.481 kb on - strand at 79.508 kb on + strand at 79.509 kb on - strand at 79.573 kb on + strand at 79.573 kb on + strand at 79.573 kb on + strand at 79.573 kb on + strand at 79.573 kb on + strand at 79.573 kb on + strand at 79.573 kb on + strand at 79.574 kb on - strand at 79.717 kb on - strand at 79.717 kb on - strand at 79.717 kb on - strand at 79.762 kb on + strand at 79.805 kb on + strand at 79.950 kb on + strand, within PfGW456L13_68 at 79.967 kb on + strand, within PfGW456L13_68 at 80.073 kb on - strand at 80.113 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 76,868 + PfGW456L13_65 0.51 -0.9 76,868 + PfGW456L13_65 0.51 -1.9 76,868 + PfGW456L13_65 0.51 -0.1 76,868 + PfGW456L13_65 0.51 +0.2 76,868 + PfGW456L13_65 0.51 -2.8 76,869 - PfGW456L13_65 0.51 -0.4 76,869 - PfGW456L13_65 0.51 -0.6 76,869 - PfGW456L13_65 0.51 -1.8 76,869 - PfGW456L13_65 0.51 -2.7 76,869 - PfGW456L13_65 0.51 +0.7 76,869 - PfGW456L13_65 0.51 -0.1 76,869 - PfGW456L13_65 0.51 -3.4 76,869 - PfGW456L13_65 0.51 +0.4 76,874 + PfGW456L13_65 0.52 -1.0 76,874 + PfGW456L13_65 0.52 -2.0 76,874 + PfGW456L13_65 0.52 +0.3 76,874 + PfGW456L13_65 0.52 -1.9 76,874 + PfGW456L13_65 0.52 +0.5 76,874 + PfGW456L13_65 0.52 +0.9 76,874 + PfGW456L13_65 0.52 -0.7 76,874 + PfGW456L13_65 0.52 -0.1 76,874 + PfGW456L13_65 0.52 +0.4 76,874 + PfGW456L13_65 0.52 -0.6 76,875 - PfGW456L13_65 0.52 -0.4 76,875 - PfGW456L13_65 0.52 +0.3 76,875 - PfGW456L13_65 0.52 -1.1 76,875 - PfGW456L13_65 0.52 +0.7 76,875 - PfGW456L13_65 0.52 +0.4 76,875 - PfGW456L13_65 0.52 -0.4 76,875 - PfGW456L13_65 0.52 -0.2 76,875 - PfGW456L13_65 0.52 +0.2 76,875 - PfGW456L13_65 0.52 +0.0 76,875 - PfGW456L13_65 0.52 +0.9 76,875 - PfGW456L13_65 0.52 -1.0 76,883 + PfGW456L13_65 0.53 +0.3 76,883 + PfGW456L13_65 0.53 +2.8 76,884 - PfGW456L13_65 0.53 +0.3 76,884 - PfGW456L13_65 0.53 -0.7 76,884 - PfGW456L13_65 0.53 -0.5 76,884 - PfGW456L13_65 0.53 -0.2 76,967 + PfGW456L13_65 0.65 +0.6 76,968 - PfGW456L13_65 0.65 -2.2 76,968 - PfGW456L13_65 0.65 -1.4 76,991 + PfGW456L13_65 0.68 -0.2 76,992 - PfGW456L13_65 0.68 +2.0 76,992 - PfGW456L13_65 0.68 -1.1 76,992 - PfGW456L13_65 0.68 +1.3 77,117 + PfGW456L13_65 0.85 -0.7 77,117 + PfGW456L13_65 0.85 -0.0 77,117 + PfGW456L13_65 0.85 -1.2 77,117 + PfGW456L13_65 0.85 +1.7 77,118 - PfGW456L13_65 0.85 -1.7 77,118 - PfGW456L13_65 0.85 -0.7 77,425 + PfGW456L13_66 0.32 -0.9 77,425 + PfGW456L13_66 0.32 -1.2 77,425 + PfGW456L13_66 0.32 +1.7 77,815 + -0.6 77,815 + +1.0 77,816 - -2.3 77,816 - -1.2 77,816 - -0.3 77,816 - -2.4 77,839 + +0.4 77,839 + +0.8 77,839 + -3.2 77,839 + +0.3 77,839 + +0.4 77,839 + +0.6 77,839 + -2.9 77,840 - -0.1 77,840 - +0.9 77,840 - -0.9 77,840 - +0.1 77,840 - -0.5 77,840 - +0.8 77,840 - +0.3 77,840 - +0.8 77,840 - -0.2 77,840 - -2.2 77,840 - +0.7 77,898 + +0.1 77,898 + +0.0 77,898 + -0.4 77,898 + +0.6 77,899 - -1.7 77,899 - -2.3 77,899 - -2.3 77,899 - -3.5 77,899 - -2.1 77,899 - -3.6 77,901 + +0.5 77,901 + -0.3 77,902 - -0.4 77,902 - +0.0 77,902 - -0.6 77,902 - -2.6 77,964 - -2.1 77,964 - -1.2 77,987 - PfGW456L13_67 0.11 -2.4 77,987 - PfGW456L13_67 0.11 -4.6 78,078 + PfGW456L13_67 0.19 -1.3 78,079 - PfGW456L13_67 0.19 -1.9 78,079 - PfGW456L13_67 0.19 -2.3 78,079 - PfGW456L13_67 0.19 -2.2 78,121 - PfGW456L13_67 0.22 -3.0 78,365 + PfGW456L13_67 0.41 -1.5 78,365 + PfGW456L13_67 0.41 -1.2 78,365 + PfGW456L13_67 0.41 -0.5 78,365 + PfGW456L13_67 0.41 -3.1 78,366 - PfGW456L13_67 0.41 -1.6 78,366 - PfGW456L13_67 0.41 -3.4 78,366 - PfGW456L13_67 0.41 -2.4 78,366 - PfGW456L13_67 0.41 -0.7 78,366 - PfGW456L13_67 0.41 -2.6 78,366 - PfGW456L13_67 0.41 -1.7 78,366 - PfGW456L13_67 0.41 -3.3 78,366 - PfGW456L13_67 0.41 -2.2 78,571 + PfGW456L13_67 0.57 -0.9 79,004 + -1.1 79,080 + -0.3 79,081 - -0.6 79,081 - -0.4 79,196 + +0.1 79,196 + -0.0 79,196 + +1.4 79,196 + -0.2 79,196 + +1.3 79,196 + -0.9 79,197 - -0.4 79,197 - +1.1 79,197 - +1.7 79,197 - +0.2 79,197 - +0.6 79,197 - -1.1 79,249 - +1.1 79,265 + +0.7 79,265 + -1.1 79,265 + +0.1 79,266 - +0.0 79,266 - +1.7 79,356 - +0.2 79,379 + -0.7 79,383 + -1.9 79,383 + -2.7 79,385 + -0.0 79,385 + +0.3 79,385 + +0.1 79,386 - +0.9 79,386 - +0.3 79,480 + +0.3 79,481 - +0.1 79,508 + +0.7 79,509 - +1.1 79,573 + -0.1 79,573 + -0.1 79,573 + -0.8 79,573 + -0.4 79,573 + -0.0 79,573 + +1.5 79,573 + -1.1 79,574 - +1.9 79,717 - -1.9 79,717 - -2.3 79,717 - -2.3 79,762 + +3.3 79,805 + +0.3 79,950 + PfGW456L13_68 0.31 -1.9 79,967 + PfGW456L13_68 0.42 -0.6 80,073 - +0.4 80,113 - +0.4
Or see this region's nucleotide sequence