Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_607 and PfGW456L13_608 are separated by 10 nucleotides PfGW456L13_608 and PfGW456L13_609 overlap by 35 nucleotides PfGW456L13_609 and PfGW456L13_610 are separated by 71 nucleotides PfGW456L13_610 and PfGW456L13_611 are separated by 8 nucleotides
PfGW456L13_607 - Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA, at 699,852 to 700,922
_607
PfGW456L13_608 - Probable transmembrane protein, at 700,933 to 701,526
_608
PfGW456L13_609 - Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion, at 701,492 to 702,232
_609
PfGW456L13_610 - hypothetical protein, at 702,304 to 702,507
_610
PfGW456L13_611 - Cytochrome c oxidase polypeptide III (EC 1.9.3.1), at 702,516 to 703,403
_611
Position (kb) 701
702
703 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 700.799 kb on - strand, within PfGW456L13_607 at 700.799 kb on - strand, within PfGW456L13_607 at 700.849 kb on + strand at 700.849 kb on + strand at 700.849 kb on + strand at 700.850 kb on - strand at 701.006 kb on + strand, within PfGW456L13_608 at 701.082 kb on - strand, within PfGW456L13_608 at 701.082 kb on - strand, within PfGW456L13_608 at 701.103 kb on - strand, within PfGW456L13_608 at 701.137 kb on - strand, within PfGW456L13_608 at 701.144 kb on + strand, within PfGW456L13_608 at 701.144 kb on + strand, within PfGW456L13_608 at 701.145 kb on - strand, within PfGW456L13_608 at 701.234 kb on + strand, within PfGW456L13_608 at 701.234 kb on + strand, within PfGW456L13_608 at 701.234 kb on + strand, within PfGW456L13_608 at 701.235 kb on - strand, within PfGW456L13_608 at 701.235 kb on - strand, within PfGW456L13_608 at 701.235 kb on - strand, within PfGW456L13_608 at 701.284 kb on + strand, within PfGW456L13_608 at 701.284 kb on + strand, within PfGW456L13_608 at 701.284 kb on + strand, within PfGW456L13_608 at 701.284 kb on + strand, within PfGW456L13_608 at 701.284 kb on + strand, within PfGW456L13_608 at 701.360 kb on + strand, within PfGW456L13_608 at 701.360 kb on + strand, within PfGW456L13_608 at 701.361 kb on - strand, within PfGW456L13_608 at 701.396 kb on + strand, within PfGW456L13_608 at 701.396 kb on + strand, within PfGW456L13_608 at 701.396 kb on + strand, within PfGW456L13_608 at 701.396 kb on + strand, within PfGW456L13_608 at 701.396 kb on + strand, within PfGW456L13_608 at 701.396 kb on + strand, within PfGW456L13_608 at 701.396 kb on + strand, within PfGW456L13_608 at 701.396 kb on + strand, within PfGW456L13_608 at 701.396 kb on + strand, within PfGW456L13_608 at 701.396 kb on + strand, within PfGW456L13_608 at 701.396 kb on + strand, within PfGW456L13_608 at 701.396 kb on + strand, within PfGW456L13_608 at 701.396 kb on + strand, within PfGW456L13_608 at 701.396 kb on + strand, within PfGW456L13_608 at 701.396 kb on + strand, within PfGW456L13_608 at 701.396 kb on + strand, within PfGW456L13_608 at 701.396 kb on + strand, within PfGW456L13_608 at 701.397 kb on - strand, within PfGW456L13_608 at 701.397 kb on - strand, within PfGW456L13_608 at 701.397 kb on - strand, within PfGW456L13_608 at 701.397 kb on - strand, within PfGW456L13_608 at 701.397 kb on - strand, within PfGW456L13_608 at 701.397 kb on - strand, within PfGW456L13_608 at 701.397 kb on - strand, within PfGW456L13_608 at 701.397 kb on - strand, within PfGW456L13_608 at 701.397 kb on - strand, within PfGW456L13_608 at 701.457 kb on + strand, within PfGW456L13_608 at 701.559 kb on + strand at 701.560 kb on - strand at 701.565 kb on + strand at 701.565 kb on + strand at 701.565 kb on + strand at 701.565 kb on + strand at 701.565 kb on + strand at 701.565 kb on + strand at 701.566 kb on - strand, within PfGW456L13_609 at 701.566 kb on - strand, within PfGW456L13_609 at 701.566 kb on - strand, within PfGW456L13_609 at 701.566 kb on - strand, within PfGW456L13_609 at 701.610 kb on + strand, within PfGW456L13_609 at 701.611 kb on - strand, within PfGW456L13_609 at 701.611 kb on - strand, within PfGW456L13_609 at 701.661 kb on + strand, within PfGW456L13_609 at 701.661 kb on + strand, within PfGW456L13_609 at 701.661 kb on + strand, within PfGW456L13_609 at 701.661 kb on + strand, within PfGW456L13_609 at 701.662 kb on - strand, within PfGW456L13_609 at 701.662 kb on - strand, within PfGW456L13_609 at 701.687 kb on + strand, within PfGW456L13_609 at 701.687 kb on + strand, within PfGW456L13_609 at 701.687 kb on + strand, within PfGW456L13_609 at 701.687 kb on + strand, within PfGW456L13_609 at 701.687 kb on + strand, within PfGW456L13_609 at 701.687 kb on + strand, within PfGW456L13_609 at 701.687 kb on + strand, within PfGW456L13_609 at 701.688 kb on - strand, within PfGW456L13_609 at 701.688 kb on - strand, within PfGW456L13_609 at 701.688 kb on - strand, within PfGW456L13_609 at 701.695 kb on - strand, within PfGW456L13_609 at 701.817 kb on + strand, within PfGW456L13_609 at 701.817 kb on + strand, within PfGW456L13_609 at 701.818 kb on - strand, within PfGW456L13_609 at 701.818 kb on - strand, within PfGW456L13_609 at 702.108 kb on + strand, within PfGW456L13_609 at 702.108 kb on + strand, within PfGW456L13_609 at 702.109 kb on - strand, within PfGW456L13_609 at 702.109 kb on - strand, within PfGW456L13_609 at 702.212 kb on - strand at 702.261 kb on + strand at 702.261 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.265 kb on + strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.266 kb on - strand at 702.267 kb on + strand at 702.267 kb on + strand at 702.267 kb on + strand at 702.267 kb on + strand at 702.267 kb on + strand at 702.268 kb on - strand at 702.268 kb on - strand at 702.268 kb on - strand at 702.268 kb on - strand at 702.268 kb on - strand at 702.268 kb on - strand at 702.268 kb on - strand at 702.268 kb on - strand at 702.275 kb on + strand at 702.275 kb on + strand at 702.275 kb on + strand at 702.275 kb on + strand at 702.275 kb on + strand at 702.275 kb on + strand at 702.275 kb on + strand at 702.276 kb on - strand at 702.276 kb on - strand at 702.276 kb on - strand at 702.276 kb on - strand at 702.276 kb on - strand at 702.505 kb on + strand at 702.505 kb on + strand at 702.506 kb on - strand at 702.506 kb on - strand at 702.506 kb on - strand at 702.506 kb on - strand at 702.506 kb on - strand at 702.518 kb on - strand at 702.518 kb on - strand at 702.526 kb on + strand at 702.526 kb on + strand at 702.527 kb on - strand at 702.527 kb on - strand at 702.527 kb on - strand at 702.574 kb on + strand at 702.719 kb on - strand, within PfGW456L13_611 at 702.719 kb on - strand, within PfGW456L13_611 at 702.719 kb on - strand, within PfGW456L13_611 at 702.766 kb on + strand, within PfGW456L13_611 at 702.766 kb on + strand, within PfGW456L13_611 at 702.766 kb on + strand, within PfGW456L13_611 at 702.766 kb on + strand, within PfGW456L13_611 at 702.766 kb on + strand, within PfGW456L13_611 at 702.766 kb on + strand, within PfGW456L13_611 at 702.766 kb on + strand, within PfGW456L13_611 at 702.766 kb on + strand, within PfGW456L13_611 at 702.767 kb on - strand, within PfGW456L13_611 at 702.767 kb on - strand, within PfGW456L13_611 at 702.767 kb on - strand, within PfGW456L13_611 at 702.767 kb on - strand, within PfGW456L13_611 at 702.767 kb on - strand, within PfGW456L13_611 at 702.767 kb on - strand, within PfGW456L13_611 at 702.767 kb on - strand, within PfGW456L13_611 at 702.767 kb on - strand, within PfGW456L13_611 at 702.767 kb on - strand, within PfGW456L13_611 at 702.767 kb on - strand, within PfGW456L13_611 at 702.767 kb on - strand, within PfGW456L13_611 at 702.807 kb on + strand, within PfGW456L13_611 at 702.807 kb on + strand, within PfGW456L13_611 at 702.807 kb on + strand, within PfGW456L13_611 at 702.808 kb on - strand, within PfGW456L13_611 at 702.808 kb on - strand, within PfGW456L13_611 at 702.808 kb on - strand, within PfGW456L13_611 at 702.808 kb on - strand, within PfGW456L13_611 at 702.808 kb on - strand, within PfGW456L13_611 at 703.078 kb on + strand, within PfGW456L13_611 at 703.078 kb on + strand, within PfGW456L13_611 at 703.078 kb on + strand, within PfGW456L13_611 at 703.078 kb on + strand, within PfGW456L13_611 at 703.079 kb on - strand, within PfGW456L13_611 at 703.079 kb on - strand, within PfGW456L13_611 at 703.079 kb on - strand, within PfGW456L13_611 at 703.174 kb on + strand, within PfGW456L13_611 at 703.174 kb on + strand, within PfGW456L13_611 at 703.174 kb on + strand, within PfGW456L13_611 at 703.175 kb on - strand, within PfGW456L13_611 at 703.175 kb on - strand, within PfGW456L13_611 at 703.228 kb on + strand, within PfGW456L13_611 at 703.228 kb on + strand, within PfGW456L13_611 at 703.228 kb on + strand, within PfGW456L13_611 at 703.228 kb on + strand, within PfGW456L13_611 at 703.229 kb on - strand, within PfGW456L13_611 at 703.229 kb on - strand, within PfGW456L13_611 at 703.229 kb on - strand, within PfGW456L13_611 at 703.229 kb on - strand, within PfGW456L13_611 at 703.229 kb on - strand, within PfGW456L13_611 at 703.229 kb on - strand, within PfGW456L13_611
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 700,799 - PfGW456L13_607 0.88 +1.8 700,799 - PfGW456L13_607 0.88 -0.1 700,849 + -0.1 700,849 + +1.6 700,849 + -1.2 700,850 - -0.8 701,006 + PfGW456L13_608 0.12 +0.5 701,082 - PfGW456L13_608 0.25 -2.3 701,082 - PfGW456L13_608 0.25 +0.5 701,103 - PfGW456L13_608 0.29 +0.3 701,137 - PfGW456L13_608 0.34 +0.1 701,144 + PfGW456L13_608 0.36 +0.4 701,144 + PfGW456L13_608 0.36 +0.7 701,145 - PfGW456L13_608 0.36 +1.6 701,234 + PfGW456L13_608 0.51 +1.7 701,234 + PfGW456L13_608 0.51 -1.5 701,234 + PfGW456L13_608 0.51 +0.5 701,235 - PfGW456L13_608 0.51 -3.1 701,235 - PfGW456L13_608 0.51 +0.5 701,235 - PfGW456L13_608 0.51 -1.0 701,284 + PfGW456L13_608 0.59 -4.1 701,284 + PfGW456L13_608 0.59 +1.9 701,284 + PfGW456L13_608 0.59 -0.3 701,284 + PfGW456L13_608 0.59 +2.4 701,284 + PfGW456L13_608 0.59 -1.7 701,360 + PfGW456L13_608 0.72 +1.6 701,360 + PfGW456L13_608 0.72 -0.6 701,361 - PfGW456L13_608 0.72 +1.1 701,396 + PfGW456L13_608 0.78 -2.0 701,396 + PfGW456L13_608 0.78 +0.8 701,396 + PfGW456L13_608 0.78 -0.6 701,396 + PfGW456L13_608 0.78 -0.1 701,396 + PfGW456L13_608 0.78 -0.5 701,396 + PfGW456L13_608 0.78 +0.3 701,396 + PfGW456L13_608 0.78 -1.7 701,396 + PfGW456L13_608 0.78 -0.5 701,396 + PfGW456L13_608 0.78 +0.2 701,396 + PfGW456L13_608 0.78 -0.3 701,396 + PfGW456L13_608 0.78 +0.2 701,396 + PfGW456L13_608 0.78 +0.6 701,396 + PfGW456L13_608 0.78 -1.0 701,396 + PfGW456L13_608 0.78 +0.9 701,396 + PfGW456L13_608 0.78 +0.6 701,396 + PfGW456L13_608 0.78 +0.2 701,396 + PfGW456L13_608 0.78 +0.9 701,397 - PfGW456L13_608 0.78 -0.3 701,397 - PfGW456L13_608 0.78 -0.9 701,397 - PfGW456L13_608 0.78 +0.4 701,397 - PfGW456L13_608 0.78 +0.7 701,397 - PfGW456L13_608 0.78 +1.3 701,397 - PfGW456L13_608 0.78 +1.3 701,397 - PfGW456L13_608 0.78 -1.6 701,397 - PfGW456L13_608 0.78 +1.5 701,397 - PfGW456L13_608 0.78 +1.2 701,457 + PfGW456L13_608 0.88 -0.3 701,559 + -0.4 701,560 - +0.5 701,565 + -0.8 701,565 + -0.4 701,565 + -0.8 701,565 + +0.4 701,565 + +1.4 701,565 + +0.4 701,566 - PfGW456L13_609 0.10 +2.0 701,566 - PfGW456L13_609 0.10 +0.5 701,566 - PfGW456L13_609 0.10 +1.4 701,566 - PfGW456L13_609 0.10 +1.6 701,610 + PfGW456L13_609 0.16 -1.0 701,611 - PfGW456L13_609 0.16 +2.0 701,611 - PfGW456L13_609 0.16 +0.8 701,661 + PfGW456L13_609 0.23 -0.1 701,661 + PfGW456L13_609 0.23 -1.4 701,661 + PfGW456L13_609 0.23 +0.8 701,661 + PfGW456L13_609 0.23 -0.4 701,662 - PfGW456L13_609 0.23 +0.8 701,662 - PfGW456L13_609 0.23 +0.4 701,687 + PfGW456L13_609 0.26 -0.3 701,687 + PfGW456L13_609 0.26 +1.6 701,687 + PfGW456L13_609 0.26 +0.9 701,687 + PfGW456L13_609 0.26 +1.2 701,687 + PfGW456L13_609 0.26 +0.5 701,687 + PfGW456L13_609 0.26 -0.2 701,687 + PfGW456L13_609 0.26 +0.4 701,688 - PfGW456L13_609 0.26 +0.9 701,688 - PfGW456L13_609 0.26 +2.1 701,688 - PfGW456L13_609 0.26 +0.8 701,695 - PfGW456L13_609 0.27 +1.1 701,817 + PfGW456L13_609 0.44 +0.4 701,817 + PfGW456L13_609 0.44 +0.4 701,818 - PfGW456L13_609 0.44 +1.8 701,818 - PfGW456L13_609 0.44 +1.9 702,108 + PfGW456L13_609 0.83 +1.9 702,108 + PfGW456L13_609 0.83 +0.2 702,109 - PfGW456L13_609 0.83 -3.0 702,109 - PfGW456L13_609 0.83 -1.1 702,212 - -2.4 702,261 + -0.1 702,261 + -2.9 702,265 + -2.0 702,265 + -1.6 702,265 + +0.9 702,265 + -0.3 702,265 + +0.4 702,265 + -0.4 702,265 + +1.2 702,265 + +0.5 702,265 + +0.3 702,265 + -0.0 702,265 + -2.2 702,265 + +1.3 702,265 + +0.4 702,265 + +1.2 702,265 + -1.0 702,265 + +1.3 702,265 + -0.5 702,265 + -0.1 702,265 + -1.0 702,265 + -1.0 702,265 + +0.2 702,265 + -0.3 702,265 + -0.0 702,265 + +0.5 702,265 + -0.8 702,265 + +0.7 702,265 + +0.9 702,265 + +1.2 702,265 + +0.0 702,265 + -1.7 702,266 - +0.8 702,266 - +1.1 702,266 - -1.2 702,266 - +1.5 702,266 - +0.0 702,266 - +1.3 702,266 - +1.0 702,266 - +1.2 702,266 - +0.4 702,266 - -1.5 702,266 - -0.5 702,266 - +0.2 702,266 - +0.2 702,266 - -1.6 702,266 - +2.3 702,266 - -0.2 702,266 - +0.7 702,266 - +1.6 702,266 - +0.0 702,266 - +2.1 702,266 - +0.7 702,266 - +2.1 702,266 - -1.0 702,266 - +0.5 702,266 - +0.8 702,266 - +0.5 702,266 - +0.4 702,266 - +1.3 702,266 - +0.7 702,266 - +1.1 702,266 - -0.8 702,266 - +0.7 702,266 - +1.1 702,266 - -2.8 702,267 + -0.9 702,267 + +1.3 702,267 + -0.7 702,267 + +0.6 702,267 + -0.9 702,268 - +1.0 702,268 - -2.6 702,268 - +3.6 702,268 - +1.1 702,268 - -1.1 702,268 - +0.4 702,268 - +0.0 702,268 - +0.2 702,275 + -0.5 702,275 + +0.7 702,275 + +0.5 702,275 + -0.3 702,275 + -0.1 702,275 + +1.2 702,275 + -0.9 702,276 - +0.3 702,276 - +0.4 702,276 - +0.8 702,276 - +0.2 702,276 - +1.2 702,505 + -0.3 702,505 + -1.1 702,506 - +1.6 702,506 - +1.0 702,506 - +1.1 702,506 - +1.2 702,506 - -1.0 702,518 - +0.1 702,518 - -0.7 702,526 + +1.2 702,526 + +1.0 702,527 - +0.7 702,527 - +0.2 702,527 - +0.4 702,574 + +0.4 702,719 - PfGW456L13_611 0.23 -0.2 702,719 - PfGW456L13_611 0.23 +0.3 702,719 - PfGW456L13_611 0.23 +1.0 702,766 + PfGW456L13_611 0.28 -0.8 702,766 + PfGW456L13_611 0.28 -0.2 702,766 + PfGW456L13_611 0.28 -0.4 702,766 + PfGW456L13_611 0.28 +0.3 702,766 + PfGW456L13_611 0.28 -1.7 702,766 + PfGW456L13_611 0.28 +0.4 702,766 + PfGW456L13_611 0.28 +1.5 702,766 + PfGW456L13_611 0.28 +0.0 702,767 - PfGW456L13_611 0.28 +1.2 702,767 - PfGW456L13_611 0.28 +1.0 702,767 - PfGW456L13_611 0.28 +0.7 702,767 - PfGW456L13_611 0.28 +0.8 702,767 - PfGW456L13_611 0.28 +0.6 702,767 - PfGW456L13_611 0.28 +0.5 702,767 - PfGW456L13_611 0.28 +1.2 702,767 - PfGW456L13_611 0.28 +0.2 702,767 - PfGW456L13_611 0.28 +1.4 702,767 - PfGW456L13_611 0.28 +0.6 702,767 - PfGW456L13_611 0.28 +0.2 702,807 + PfGW456L13_611 0.33 -0.0 702,807 + PfGW456L13_611 0.33 +1.5 702,807 + PfGW456L13_611 0.33 -0.5 702,808 - PfGW456L13_611 0.33 +1.0 702,808 - PfGW456L13_611 0.33 -1.0 702,808 - PfGW456L13_611 0.33 +1.6 702,808 - PfGW456L13_611 0.33 +0.2 702,808 - PfGW456L13_611 0.33 +0.1 703,078 + PfGW456L13_611 0.63 -0.6 703,078 + PfGW456L13_611 0.63 -0.8 703,078 + PfGW456L13_611 0.63 +0.6 703,078 + PfGW456L13_611 0.63 -2.5 703,079 - PfGW456L13_611 0.63 +1.5 703,079 - PfGW456L13_611 0.63 +1.1 703,079 - PfGW456L13_611 0.63 +1.2 703,174 + PfGW456L13_611 0.74 +0.6 703,174 + PfGW456L13_611 0.74 -0.2 703,174 + PfGW456L13_611 0.74 -0.3 703,175 - PfGW456L13_611 0.74 +1.1 703,175 - PfGW456L13_611 0.74 +0.2 703,228 + PfGW456L13_611 0.80 +0.9 703,228 + PfGW456L13_611 0.80 +1.3 703,228 + PfGW456L13_611 0.80 -2.6 703,228 + PfGW456L13_611 0.80 -1.7 703,229 - PfGW456L13_611 0.80 -0.7 703,229 - PfGW456L13_611 0.80 -1.7 703,229 - PfGW456L13_611 0.80 -0.4 703,229 - PfGW456L13_611 0.80 +0.4 703,229 - PfGW456L13_611 0.80 +1.0 703,229 - PfGW456L13_611 0.80 -0.2
Or see this region's nucleotide sequence