Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_576 and PfGW456L13_577 overlap by 19 nucleotides PfGW456L13_577 and PfGW456L13_578 are separated by 189 nucleotides
PfGW456L13_576 - PUTATIVE ZINC PROTEASE PROTEIN, at 669,922 to 670,947
_576
PfGW456L13_577 - Fused spore maturation proteins A and B, at 670,929 to 672,158
_577
PfGW456L13_578 - Glutamate-aspartate carrier protein, at 672,348 to 673,679
_578
Position (kb) 670
671
672
673 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 669.952 kb on + strand at 669.952 kb on + strand at 669.952 kb on + strand at 669.952 kb on + strand at 669.952 kb on + strand at 669.953 kb on - strand at 669.953 kb on - strand at 669.953 kb on - strand at 669.953 kb on - strand at 669.953 kb on - strand at 669.953 kb on - strand at 669.953 kb on - strand at 669.953 kb on - strand at 669.953 kb on - strand at 669.953 kb on - strand at 669.953 kb on - strand at 669.955 kb on + strand at 669.955 kb on + strand at 669.956 kb on - strand at 669.956 kb on - strand at 669.956 kb on - strand at 669.956 kb on - strand at 669.956 kb on - strand at 670.114 kb on - strand, within PfGW456L13_576 at 670.123 kb on + strand, within PfGW456L13_576 at 670.132 kb on + strand, within PfGW456L13_576 at 670.133 kb on - strand, within PfGW456L13_576 at 670.246 kb on + strand, within PfGW456L13_576 at 670.249 kb on + strand, within PfGW456L13_576 at 670.249 kb on + strand, within PfGW456L13_576 at 670.249 kb on + strand, within PfGW456L13_576 at 670.249 kb on + strand, within PfGW456L13_576 at 670.249 kb on + strand, within PfGW456L13_576 at 670.249 kb on + strand, within PfGW456L13_576 at 670.250 kb on - strand, within PfGW456L13_576 at 670.250 kb on - strand, within PfGW456L13_576 at 670.250 kb on - strand, within PfGW456L13_576 at 670.250 kb on - strand, within PfGW456L13_576 at 670.250 kb on - strand, within PfGW456L13_576 at 670.330 kb on + strand, within PfGW456L13_576 at 670.331 kb on - strand, within PfGW456L13_576 at 670.438 kb on + strand, within PfGW456L13_576 at 670.438 kb on + strand, within PfGW456L13_576 at 670.438 kb on + strand, within PfGW456L13_576 at 670.438 kb on + strand, within PfGW456L13_576 at 670.438 kb on + strand, within PfGW456L13_576 at 670.438 kb on + strand, within PfGW456L13_576 at 670.438 kb on + strand, within PfGW456L13_576 at 670.438 kb on + strand, within PfGW456L13_576 at 670.439 kb on - strand, within PfGW456L13_576 at 670.439 kb on - strand, within PfGW456L13_576 at 670.439 kb on - strand, within PfGW456L13_576 at 670.439 kb on - strand, within PfGW456L13_576 at 670.498 kb on - strand, within PfGW456L13_576 at 670.612 kb on + strand, within PfGW456L13_576 at 670.612 kb on + strand, within PfGW456L13_576 at 670.613 kb on - strand, within PfGW456L13_576 at 670.613 kb on - strand, within PfGW456L13_576 at 670.684 kb on + strand, within PfGW456L13_576 at 670.684 kb on + strand, within PfGW456L13_576 at 670.727 kb on - strand, within PfGW456L13_576 at 670.783 kb on + strand, within PfGW456L13_576 at 670.783 kb on + strand, within PfGW456L13_576 at 670.784 kb on - strand, within PfGW456L13_576 at 670.784 kb on - strand, within PfGW456L13_576 at 670.784 kb on - strand, within PfGW456L13_576 at 670.784 kb on - strand, within PfGW456L13_576 at 670.784 kb on - strand, within PfGW456L13_576 at 670.849 kb on + strand at 670.958 kb on + strand at 671.041 kb on + strand at 671.042 kb on - strand at 671.042 kb on - strand at 671.042 kb on - strand at 671.056 kb on + strand, within PfGW456L13_577 at 671.056 kb on + strand, within PfGW456L13_577 at 671.056 kb on + strand, within PfGW456L13_577 at 671.056 kb on + strand, within PfGW456L13_577 at 671.056 kb on + strand, within PfGW456L13_577 at 671.056 kb on + strand, within PfGW456L13_577 at 671.056 kb on + strand, within PfGW456L13_577 at 671.056 kb on + strand, within PfGW456L13_577 at 671.056 kb on + strand, within PfGW456L13_577 at 671.056 kb on + strand, within PfGW456L13_577 at 671.056 kb on + strand, within PfGW456L13_577 at 671.056 kb on + strand, within PfGW456L13_577 at 671.056 kb on + strand, within PfGW456L13_577 at 671.056 kb on + strand, within PfGW456L13_577 at 671.057 kb on - strand, within PfGW456L13_577 at 671.057 kb on - strand, within PfGW456L13_577 at 671.057 kb on - strand, within PfGW456L13_577 at 671.057 kb on - strand, within PfGW456L13_577 at 671.057 kb on - strand, within PfGW456L13_577 at 671.057 kb on - strand, within PfGW456L13_577 at 671.057 kb on - strand, within PfGW456L13_577 at 671.057 kb on - strand, within PfGW456L13_577 at 671.057 kb on - strand, within PfGW456L13_577 at 671.057 kb on - strand, within PfGW456L13_577 at 671.057 kb on - strand, within PfGW456L13_577 at 671.057 kb on - strand, within PfGW456L13_577 at 671.057 kb on - strand, within PfGW456L13_577 at 671.057 kb on - strand, within PfGW456L13_577 at 671.377 kb on + strand, within PfGW456L13_577 at 671.377 kb on + strand, within PfGW456L13_577 at 671.377 kb on + strand, within PfGW456L13_577 at 671.378 kb on - strand, within PfGW456L13_577 at 671.539 kb on + strand, within PfGW456L13_577 at 671.539 kb on + strand, within PfGW456L13_577 at 671.680 kb on + strand, within PfGW456L13_577 at 671.680 kb on + strand, within PfGW456L13_577 at 671.680 kb on + strand, within PfGW456L13_577 at 671.681 kb on - strand, within PfGW456L13_577 at 671.730 kb on + strand, within PfGW456L13_577 at 671.731 kb on - strand, within PfGW456L13_577 at 671.855 kb on + strand, within PfGW456L13_577 at 671.855 kb on + strand, within PfGW456L13_577 at 671.856 kb on - strand, within PfGW456L13_577 at 671.856 kb on - strand, within PfGW456L13_577 at 672.115 kb on - strand at 672.115 kb on - strand at 672.241 kb on + strand at 672.241 kb on + strand at 672.242 kb on - strand at 672.242 kb on - strand at 672.242 kb on - strand at 672.242 kb on - strand at 672.439 kb on + strand at 672.439 kb on + strand at 672.439 kb on + strand at 672.439 kb on + strand at 672.440 kb on - strand at 672.440 kb on - strand at 672.440 kb on - strand at 672.440 kb on - strand at 672.564 kb on - strand, within PfGW456L13_578 at 672.591 kb on + strand, within PfGW456L13_578 at 672.613 kb on - strand, within PfGW456L13_578 at 672.691 kb on + strand, within PfGW456L13_578 at 672.692 kb on - strand, within PfGW456L13_578 at 672.692 kb on - strand, within PfGW456L13_578 at 672.692 kb on - strand, within PfGW456L13_578 at 672.859 kb on + strand, within PfGW456L13_578 at 672.860 kb on - strand, within PfGW456L13_578 at 672.860 kb on - strand, within PfGW456L13_578 at 672.860 kb on - strand, within PfGW456L13_578 at 672.860 kb on - strand, within PfGW456L13_578 at 672.867 kb on + strand, within PfGW456L13_578 at 672.868 kb on - strand, within PfGW456L13_578 at 672.971 kb on - strand, within PfGW456L13_578 at 672.971 kb on - strand, within PfGW456L13_578 at 672.971 kb on - strand, within PfGW456L13_578 at 673.066 kb on + strand, within PfGW456L13_578 at 673.066 kb on + strand, within PfGW456L13_578 at 673.066 kb on + strand, within PfGW456L13_578 at 673.067 kb on - strand, within PfGW456L13_578 at 673.067 kb on - strand, within PfGW456L13_578 at 673.067 kb on - strand, within PfGW456L13_578 at 673.067 kb on - strand, within PfGW456L13_578 at 673.067 kb on - strand, within PfGW456L13_578
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 669,952 + +1.1 669,952 + -1.7 669,952 + +1.2 669,952 + +3.1 669,952 + +0.9 669,953 - -0.1 669,953 - -0.7 669,953 - -0.1 669,953 - -3.5 669,953 - -2.2 669,953 - +0.3 669,953 - +0.9 669,953 - +1.3 669,953 - +0.1 669,953 - +0.4 669,953 - -3.5 669,955 + +1.7 669,955 + +1.1 669,956 - -0.5 669,956 - +1.4 669,956 - +2.0 669,956 - -0.4 669,956 - -0.6 670,114 - PfGW456L13_576 0.19 +3.0 670,123 + PfGW456L13_576 0.20 +0.7 670,132 + PfGW456L13_576 0.20 +0.2 670,133 - PfGW456L13_576 0.21 -0.7 670,246 + PfGW456L13_576 0.32 -0.2 670,249 + PfGW456L13_576 0.32 +1.1 670,249 + PfGW456L13_576 0.32 +0.6 670,249 + PfGW456L13_576 0.32 +0.2 670,249 + PfGW456L13_576 0.32 +0.1 670,249 + PfGW456L13_576 0.32 +1.4 670,249 + PfGW456L13_576 0.32 +0.2 670,250 - PfGW456L13_576 0.32 -3.1 670,250 - PfGW456L13_576 0.32 -1.2 670,250 - PfGW456L13_576 0.32 -0.6 670,250 - PfGW456L13_576 0.32 -1.0 670,250 - PfGW456L13_576 0.32 +0.9 670,330 + PfGW456L13_576 0.40 +1.0 670,331 - PfGW456L13_576 0.40 -0.8 670,438 + PfGW456L13_576 0.50 +1.6 670,438 + PfGW456L13_576 0.50 +0.1 670,438 + PfGW456L13_576 0.50 +1.4 670,438 + PfGW456L13_576 0.50 +0.0 670,438 + PfGW456L13_576 0.50 +0.1 670,438 + PfGW456L13_576 0.50 +1.9 670,438 + PfGW456L13_576 0.50 +0.2 670,438 + PfGW456L13_576 0.50 +1.4 670,439 - PfGW456L13_576 0.50 -3.8 670,439 - PfGW456L13_576 0.50 -2.0 670,439 - PfGW456L13_576 0.50 +0.2 670,439 - PfGW456L13_576 0.50 -0.2 670,498 - PfGW456L13_576 0.56 -0.4 670,612 + PfGW456L13_576 0.67 -0.9 670,612 + PfGW456L13_576 0.67 +1.6 670,613 - PfGW456L13_576 0.67 -0.8 670,613 - PfGW456L13_576 0.67 -0.7 670,684 + PfGW456L13_576 0.74 +0.1 670,684 + PfGW456L13_576 0.74 +0.8 670,727 - PfGW456L13_576 0.78 +0.2 670,783 + PfGW456L13_576 0.84 +0.1 670,783 + PfGW456L13_576 0.84 +1.7 670,784 - PfGW456L13_576 0.84 -1.5 670,784 - PfGW456L13_576 0.84 +0.3 670,784 - PfGW456L13_576 0.84 -0.1 670,784 - PfGW456L13_576 0.84 -2.1 670,784 - PfGW456L13_576 0.84 -1.9 670,849 + +1.3 670,958 + +1.5 671,041 + +1.4 671,042 - +0.3 671,042 - +0.3 671,042 - -3.5 671,056 + PfGW456L13_577 0.10 +0.5 671,056 + PfGW456L13_577 0.10 +1.0 671,056 + PfGW456L13_577 0.10 +0.7 671,056 + PfGW456L13_577 0.10 +0.9 671,056 + PfGW456L13_577 0.10 +2.1 671,056 + PfGW456L13_577 0.10 +3.8 671,056 + PfGW456L13_577 0.10 +1.1 671,056 + PfGW456L13_577 0.10 +1.6 671,056 + PfGW456L13_577 0.10 -1.2 671,056 + PfGW456L13_577 0.10 +2.0 671,056 + PfGW456L13_577 0.10 +2.0 671,056 + PfGW456L13_577 0.10 +2.6 671,056 + PfGW456L13_577 0.10 +1.7 671,056 + PfGW456L13_577 0.10 +2.0 671,057 - PfGW456L13_577 0.10 -0.2 671,057 - PfGW456L13_577 0.10 +0.3 671,057 - PfGW456L13_577 0.10 +0.0 671,057 - PfGW456L13_577 0.10 -2.7 671,057 - PfGW456L13_577 0.10 -0.7 671,057 - PfGW456L13_577 0.10 -0.6 671,057 - PfGW456L13_577 0.10 -2.4 671,057 - PfGW456L13_577 0.10 -0.5 671,057 - PfGW456L13_577 0.10 -0.2 671,057 - PfGW456L13_577 0.10 +0.4 671,057 - PfGW456L13_577 0.10 -0.1 671,057 - PfGW456L13_577 0.10 -0.8 671,057 - PfGW456L13_577 0.10 -0.1 671,057 - PfGW456L13_577 0.10 -1.0 671,377 + PfGW456L13_577 0.36 +2.0 671,377 + PfGW456L13_577 0.36 +2.4 671,377 + PfGW456L13_577 0.36 +1.3 671,378 - PfGW456L13_577 0.37 -1.5 671,539 + PfGW456L13_577 0.50 +1.6 671,539 + PfGW456L13_577 0.50 -0.6 671,680 + PfGW456L13_577 0.61 +2.7 671,680 + PfGW456L13_577 0.61 +2.8 671,680 + PfGW456L13_577 0.61 +2.7 671,681 - PfGW456L13_577 0.61 +1.5 671,730 + PfGW456L13_577 0.65 +3.3 671,731 - PfGW456L13_577 0.65 -1.1 671,855 + PfGW456L13_577 0.75 +3.2 671,855 + PfGW456L13_577 0.75 +1.2 671,856 - PfGW456L13_577 0.75 +1.1 671,856 - PfGW456L13_577 0.75 +0.6 672,115 - -1.1 672,115 - -1.1 672,241 + +3.1 672,241 + +2.7 672,242 - -0.4 672,242 - +0.3 672,242 - -0.7 672,242 - +0.4 672,439 + +2.1 672,439 + +3.6 672,439 + +3.1 672,439 + +5.2 672,440 - +2.7 672,440 - +2.6 672,440 - +3.5 672,440 - +1.2 672,564 - PfGW456L13_578 0.16 +0.2 672,591 + PfGW456L13_578 0.18 +2.8 672,613 - PfGW456L13_578 0.20 +5.0 672,691 + PfGW456L13_578 0.26 +2.2 672,692 - PfGW456L13_578 0.26 +1.5 672,692 - PfGW456L13_578 0.26 +3.3 672,692 - PfGW456L13_578 0.26 +1.8 672,859 + PfGW456L13_578 0.38 +2.0 672,860 - PfGW456L13_578 0.38 +2.4 672,860 - PfGW456L13_578 0.38 +3.2 672,860 - PfGW456L13_578 0.38 +2.2 672,860 - PfGW456L13_578 0.38 +3.6 672,867 + PfGW456L13_578 0.39 +2.0 672,868 - PfGW456L13_578 0.39 +2.0 672,971 - PfGW456L13_578 0.47 +2.2 672,971 - PfGW456L13_578 0.47 +2.0 672,971 - PfGW456L13_578 0.47 +1.6 673,066 + PfGW456L13_578 0.54 +3.9 673,066 + PfGW456L13_578 0.54 +2.2 673,066 + PfGW456L13_578 0.54 +3.3 673,067 - PfGW456L13_578 0.54 +2.8 673,067 - PfGW456L13_578 0.54 +3.5 673,067 - PfGW456L13_578 0.54 +2.8 673,067 - PfGW456L13_578 0.54 +2.3 673,067 - PfGW456L13_578 0.54 +3.1
Or see this region's nucleotide sequence