Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4726 and PfGW456L13_4727 are separated by 27 nucleotides PfGW456L13_4727 and PfGW456L13_4728 are separated by 45 nucleotides PfGW456L13_4728 and PfGW456L13_4729 are separated by 143 nucleotides
PfGW456L13_4726 - Lipoprotein-related protein, at 5,267,855 to 5,268,253
_4726
PfGW456L13_4727 - FIG00954412: hypothetical protein, at 5,268,281 to 5,268,970
_4727
PfGW456L13_4728 - FIG00962583: hypothetical protein, at 5,269,016 to 5,270,362
_4728
PfGW456L13_4729 - hypothetical protein, at 5,270,506 to 5,270,634
_4729
Position (kb) 5269
5270
5271 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 5268.095 kb on + strand, within PfGW456L13_4726 at 5268.096 kb on - strand, within PfGW456L13_4726 at 5268.096 kb on - strand, within PfGW456L13_4726 at 5268.112 kb on - strand, within PfGW456L13_4726 at 5268.129 kb on - strand, within PfGW456L13_4726 at 5268.129 kb on - strand, within PfGW456L13_4726 at 5268.251 kb on + strand at 5268.779 kb on + strand, within PfGW456L13_4727 at 5268.779 kb on + strand, within PfGW456L13_4727 at 5268.779 kb on + strand, within PfGW456L13_4727 at 5268.779 kb on + strand, within PfGW456L13_4727 at 5268.780 kb on - strand, within PfGW456L13_4727 at 5268.780 kb on - strand, within PfGW456L13_4727 at 5268.780 kb on - strand, within PfGW456L13_4727 at 5268.780 kb on - strand, within PfGW456L13_4727 at 5268.780 kb on - strand, within PfGW456L13_4727 at 5268.780 kb on - strand, within PfGW456L13_4727 at 5268.816 kb on + strand, within PfGW456L13_4727 at 5268.848 kb on + strand, within PfGW456L13_4727 at 5268.848 kb on + strand, within PfGW456L13_4727 at 5268.848 kb on + strand, within PfGW456L13_4727 at 5268.849 kb on - strand, within PfGW456L13_4727 at 5268.849 kb on - strand, within PfGW456L13_4727 at 5268.849 kb on - strand, within PfGW456L13_4727 at 5269.037 kb on + strand at 5269.038 kb on - strand at 5269.038 kb on - strand at 5269.103 kb on + strand at 5269.103 kb on + strand at 5269.104 kb on - strand at 5269.104 kb on - strand at 5269.104 kb on - strand at 5269.126 kb on - strand at 5269.126 kb on - strand at 5269.190 kb on + strand, within PfGW456L13_4728 at 5269.350 kb on + strand, within PfGW456L13_4728 at 5269.350 kb on + strand, within PfGW456L13_4728 at 5269.350 kb on + strand, within PfGW456L13_4728 at 5269.350 kb on + strand, within PfGW456L13_4728 at 5269.350 kb on + strand, within PfGW456L13_4728 at 5269.350 kb on + strand, within PfGW456L13_4728 at 5269.351 kb on - strand, within PfGW456L13_4728 at 5269.351 kb on - strand, within PfGW456L13_4728 at 5269.351 kb on - strand, within PfGW456L13_4728 at 5269.351 kb on - strand, within PfGW456L13_4728 at 5269.351 kb on - strand, within PfGW456L13_4728 at 5269.351 kb on - strand, within PfGW456L13_4728 at 5269.351 kb on - strand, within PfGW456L13_4728 at 5269.351 kb on - strand, within PfGW456L13_4728 at 5269.386 kb on + strand, within PfGW456L13_4728 at 5269.398 kb on + strand, within PfGW456L13_4728 at 5269.440 kb on + strand, within PfGW456L13_4728 at 5269.455 kb on + strand, within PfGW456L13_4728 at 5269.456 kb on - strand, within PfGW456L13_4728 at 5269.479 kb on + strand, within PfGW456L13_4728 at 5269.578 kb on + strand, within PfGW456L13_4728 at 5269.578 kb on + strand, within PfGW456L13_4728 at 5269.578 kb on + strand, within PfGW456L13_4728 at 5269.579 kb on - strand, within PfGW456L13_4728 at 5269.579 kb on - strand, within PfGW456L13_4728 at 5269.579 kb on - strand, within PfGW456L13_4728 at 5269.579 kb on - strand, within PfGW456L13_4728 at 5269.700 kb on + strand, within PfGW456L13_4728 at 5269.700 kb on + strand, within PfGW456L13_4728 at 5269.701 kb on - strand, within PfGW456L13_4728 at 5269.737 kb on + strand, within PfGW456L13_4728 at 5269.738 kb on - strand, within PfGW456L13_4728 at 5270.025 kb on + strand, within PfGW456L13_4728 at 5270.025 kb on + strand, within PfGW456L13_4728 at 5270.025 kb on + strand, within PfGW456L13_4728 at 5270.026 kb on - strand, within PfGW456L13_4728 at 5270.026 kb on - strand, within PfGW456L13_4728 at 5270.129 kb on + strand, within PfGW456L13_4728 at 5270.130 kb on - strand, within PfGW456L13_4728 at 5270.142 kb on + strand, within PfGW456L13_4728 at 5270.274 kb on + strand at 5270.274 kb on + strand at 5270.400 kb on + strand at 5270.401 kb on - strand at 5270.401 kb on - strand at 5270.428 kb on - strand at 5270.428 kb on - strand at 5270.445 kb on + strand at 5270.445 kb on + strand at 5270.445 kb on + strand at 5270.446 kb on - strand at 5270.446 kb on - strand at 5270.446 kb on - strand at 5270.446 kb on - strand at 5270.446 kb on - strand at 5270.446 kb on - strand at 5270.451 kb on + strand at 5270.451 kb on + strand at 5270.451 kb on + strand at 5270.451 kb on + strand at 5270.451 kb on + strand at 5270.451 kb on + strand at 5270.451 kb on + strand at 5270.451 kb on + strand at 5270.451 kb on + strand at 5270.451 kb on + strand at 5270.451 kb on + strand at 5270.451 kb on + strand at 5270.451 kb on + strand at 5270.451 kb on + strand at 5270.451 kb on + strand at 5270.451 kb on + strand at 5270.452 kb on - strand at 5270.452 kb on - strand at 5270.452 kb on - strand at 5270.452 kb on - strand at 5270.452 kb on - strand at 5270.452 kb on - strand at 5270.452 kb on - strand at 5270.452 kb on - strand at 5270.452 kb on - strand at 5270.452 kb on - strand at 5270.478 kb on + strand at 5270.479 kb on - strand at 5270.479 kb on - strand at 5270.507 kb on + strand at 5270.508 kb on - strand at 5270.548 kb on + strand, within PfGW456L13_4729 at 5270.548 kb on + strand, within PfGW456L13_4729 at 5270.548 kb on + strand, within PfGW456L13_4729 at 5270.549 kb on - strand, within PfGW456L13_4729 at 5270.635 kb on + strand at 5270.635 kb on + strand at 5270.635 kb on + strand at 5270.636 kb on - strand at 5270.672 kb on - strand at 5270.798 kb on + strand at 5270.798 kb on + strand at 5270.799 kb on - strand at 5270.807 kb on - strand at 5270.863 kb on + strand at 5270.948 kb on + strand at 5270.948 kb on + strand at 5270.948 kb on + strand at 5270.948 kb on + strand at 5270.949 kb on - strand at 5270.949 kb on - strand at 5270.978 kb on - strand at 5270.992 kb on + strand at 5270.993 kb on - strand at 5271.063 kb on + strand at 5271.063 kb on + strand at 5271.064 kb on - strand at 5271.073 kb on - strand at 5271.134 kb on + strand at 5271.135 kb on - strand at 5271.135 kb on - strand at 5271.205 kb on + strand at 5271.205 kb on + strand at 5271.205 kb on + strand at 5271.348 kb on + strand at 5271.349 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 5,268,095 + PfGW456L13_4726 0.60 -1.2 5,268,096 - PfGW456L13_4726 0.60 -0.9 5,268,096 - PfGW456L13_4726 0.60 -0.3 5,268,112 - PfGW456L13_4726 0.64 -0.1 5,268,129 - PfGW456L13_4726 0.69 -1.9 5,268,129 - PfGW456L13_4726 0.69 +0.0 5,268,251 + -0.2 5,268,779 + PfGW456L13_4727 0.72 -1.3 5,268,779 + PfGW456L13_4727 0.72 +0.7 5,268,779 + PfGW456L13_4727 0.72 +0.2 5,268,779 + PfGW456L13_4727 0.72 +0.5 5,268,780 - PfGW456L13_4727 0.72 -0.8 5,268,780 - PfGW456L13_4727 0.72 -0.1 5,268,780 - PfGW456L13_4727 0.72 +0.1 5,268,780 - PfGW456L13_4727 0.72 +0.2 5,268,780 - PfGW456L13_4727 0.72 -1.1 5,268,780 - PfGW456L13_4727 0.72 +2.2 5,268,816 + PfGW456L13_4727 0.78 -0.6 5,268,848 + PfGW456L13_4727 0.82 -1.2 5,268,848 + PfGW456L13_4727 0.82 +1.0 5,268,848 + PfGW456L13_4727 0.82 -1.9 5,268,849 - PfGW456L13_4727 0.82 +0.4 5,268,849 - PfGW456L13_4727 0.82 +1.6 5,268,849 - PfGW456L13_4727 0.82 +0.1 5,269,037 + -1.0 5,269,038 - -4.3 5,269,038 - +0.3 5,269,103 + +0.2 5,269,103 + -1.7 5,269,104 - -1.5 5,269,104 - +1.3 5,269,104 - -0.8 5,269,126 - +0.4 5,269,126 - -0.7 5,269,190 + PfGW456L13_4728 0.13 -0.2 5,269,350 + PfGW456L13_4728 0.25 +1.4 5,269,350 + PfGW456L13_4728 0.25 -0.2 5,269,350 + PfGW456L13_4728 0.25 +0.4 5,269,350 + PfGW456L13_4728 0.25 -1.9 5,269,350 + PfGW456L13_4728 0.25 -0.6 5,269,350 + PfGW456L13_4728 0.25 -0.3 5,269,351 - PfGW456L13_4728 0.25 +0.6 5,269,351 - PfGW456L13_4728 0.25 -0.1 5,269,351 - PfGW456L13_4728 0.25 -0.6 5,269,351 - PfGW456L13_4728 0.25 +0.9 5,269,351 - PfGW456L13_4728 0.25 -0.9 5,269,351 - PfGW456L13_4728 0.25 +0.3 5,269,351 - PfGW456L13_4728 0.25 -0.4 5,269,351 - PfGW456L13_4728 0.25 +1.2 5,269,386 + PfGW456L13_4728 0.27 +0.9 5,269,398 + PfGW456L13_4728 0.28 +0.8 5,269,440 + PfGW456L13_4728 0.31 -0.2 5,269,455 + PfGW456L13_4728 0.33 -0.6 5,269,456 - PfGW456L13_4728 0.33 +0.5 5,269,479 + PfGW456L13_4728 0.34 -0.9 5,269,578 + PfGW456L13_4728 0.42 +0.9 5,269,578 + PfGW456L13_4728 0.42 -0.8 5,269,578 + PfGW456L13_4728 0.42 +0.7 5,269,579 - PfGW456L13_4728 0.42 -0.5 5,269,579 - PfGW456L13_4728 0.42 +0.9 5,269,579 - PfGW456L13_4728 0.42 +1.2 5,269,579 - PfGW456L13_4728 0.42 +0.7 5,269,700 + PfGW456L13_4728 0.51 -0.6 5,269,700 + PfGW456L13_4728 0.51 -1.4 5,269,701 - PfGW456L13_4728 0.51 +0.3 5,269,737 + PfGW456L13_4728 0.54 +1.6 5,269,738 - PfGW456L13_4728 0.54 +1.4 5,270,025 + PfGW456L13_4728 0.75 -0.5 5,270,025 + PfGW456L13_4728 0.75 -3.7 5,270,025 + PfGW456L13_4728 0.75 -2.0 5,270,026 - PfGW456L13_4728 0.75 +0.5 5,270,026 - PfGW456L13_4728 0.75 +0.6 5,270,129 + PfGW456L13_4728 0.83 +0.2 5,270,130 - PfGW456L13_4728 0.83 -0.8 5,270,142 + PfGW456L13_4728 0.84 -0.1 5,270,274 + -0.0 5,270,274 + -0.4 5,270,400 + +0.6 5,270,401 - -0.3 5,270,401 - -0.9 5,270,428 - -0.2 5,270,428 - +1.7 5,270,445 + -0.6 5,270,445 + +0.4 5,270,445 + -2.0 5,270,446 - -0.1 5,270,446 - +0.5 5,270,446 - +0.9 5,270,446 - +1.4 5,270,446 - -0.6 5,270,446 - +1.4 5,270,451 + -0.6 5,270,451 + +1.0 5,270,451 + -0.2 5,270,451 + -0.4 5,270,451 + -0.6 5,270,451 + +0.1 5,270,451 + -1.1 5,270,451 + -2.3 5,270,451 + +0.8 5,270,451 + -0.4 5,270,451 + -0.7 5,270,451 + -0.1 5,270,451 + -0.8 5,270,451 + +0.4 5,270,451 + +0.0 5,270,451 + -1.0 5,270,452 - -0.2 5,270,452 - -1.0 5,270,452 - -1.8 5,270,452 - -0.9 5,270,452 - -0.4 5,270,452 - -0.2 5,270,452 - +0.1 5,270,452 - -0.8 5,270,452 - +1.1 5,270,452 - -1.7 5,270,478 + +0.4 5,270,479 - +0.2 5,270,479 - -0.2 5,270,507 + +0.5 5,270,508 - +0.4 5,270,548 + PfGW456L13_4729 0.33 -0.8 5,270,548 + PfGW456L13_4729 0.33 -1.8 5,270,548 + PfGW456L13_4729 0.33 -0.3 5,270,549 - PfGW456L13_4729 0.33 -0.5 5,270,635 + +0.4 5,270,635 + +1.1 5,270,635 + -0.3 5,270,636 - -0.0 5,270,672 - +1.7 5,270,798 + -0.9 5,270,798 + -0.4 5,270,799 - -0.5 5,270,807 - -0.2 5,270,863 + -0.2 5,270,948 + +0.3 5,270,948 + +0.1 5,270,948 + -0.1 5,270,948 + +0.4 5,270,949 - -0.3 5,270,949 - +0.6 5,270,978 - +1.4 5,270,992 + -0.1 5,270,993 - -0.4 5,271,063 + -0.7 5,271,063 + +2.0 5,271,064 - +1.2 5,271,073 - -0.4 5,271,134 + -0.2 5,271,135 - -0.2 5,271,135 - -2.6 5,271,205 + +0.3 5,271,205 + +0.7 5,271,205 + +1.0 5,271,348 + -0.5 5,271,349 - +1.4
Or see this region's nucleotide sequence