Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4706

Experiment: L-Tryptophan (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPfGW456L13_4704 and PfGW456L13_4705 are separated by 13 nucleotidesPfGW456L13_4705 and PfGW456L13_4706 overlap by 4 nucleotidesPfGW456L13_4706 and PfGW456L13_4707 are separated by 215 nucleotides PfGW456L13_4704 - Undecaprenyl diphosphate synthase (EC 2.5.1.31), at 5,243,761 to 5,244,516 _4704 PfGW456L13_4705 - Ribosome recycling factor, at 5,244,530 to 5,245,087 _4705 PfGW456L13_4706 - Uridine monophosphate kinase (EC 2.7.4.22), at 5,245,084 to 5,245,827 _4706 PfGW456L13_4707 - Translation elongation factor Ts, at 5,246,043 to 5,246,906 _4707 Position (kb) 5245 5246Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 5244.534 kb on - strandat 5245.854 kb on - strandat 5245.881 kb on - strandat 5245.881 kb on - strandat 5245.899 kb on - strandat 5245.939 kb on - strandat 5246.045 kb on - strandat 5246.045 kb on - strandat 5246.045 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Tryptophan (C)
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5,244,534 - -0.8
5,245,854 - -1.7
5,245,881 - +2.2
5,245,881 - +0.1
5,245,899 - +1.3
5,245,939 - -3.2
5,246,045 - -3.2
5,246,045 - -1.5
5,246,045 - -0.3

Or see this region's nucleotide sequence