Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_428 and PfGW456L13_429 overlap by 1 nucleotides PfGW456L13_429 and PfGW456L13_430 are separated by 234 nucleotides PfGW456L13_430 and PfGW456L13_431 are separated by 247 nucleotides
PfGW456L13_428 - Transcription accessory protein (S1 RNA-binding domain), at 492,222 to 494,546
_428
PfGW456L13_429 - Uncharacterized protein, possibly involved in aromatic compounds catabolism, at 494,546 to 494,929
_429
PfGW456L13_430 - Glutamate--cysteine ligase (EC 6.3.2.2), at 495,164 to 496,747
_430
PfGW456L13_431 - Taurine-binding periplasmic protein TauA, at 496,995 to 497,972
_431
Position (kb) 495
496
497 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 494.176 kb on + strand, within PfGW456L13_428 at 494.176 kb on + strand, within PfGW456L13_428 at 494.176 kb on + strand, within PfGW456L13_428 at 494.176 kb on + strand, within PfGW456L13_428 at 494.176 kb on + strand, within PfGW456L13_428 at 494.177 kb on - strand, within PfGW456L13_428 at 494.177 kb on - strand, within PfGW456L13_428 at 494.177 kb on - strand, within PfGW456L13_428 at 494.177 kb on - strand, within PfGW456L13_428 at 494.786 kb on + strand, within PfGW456L13_429 at 494.786 kb on + strand, within PfGW456L13_429 at 494.786 kb on + strand, within PfGW456L13_429 at 494.786 kb on + strand, within PfGW456L13_429 at 494.786 kb on + strand, within PfGW456L13_429 at 494.786 kb on + strand, within PfGW456L13_429 at 494.786 kb on + strand, within PfGW456L13_429 at 494.787 kb on - strand, within PfGW456L13_429 at 494.787 kb on - strand, within PfGW456L13_429 at 494.787 kb on - strand, within PfGW456L13_429 at 494.787 kb on - strand, within PfGW456L13_429 at 494.787 kb on - strand, within PfGW456L13_429 at 494.787 kb on - strand, within PfGW456L13_429 at 494.787 kb on - strand, within PfGW456L13_429 at 494.787 kb on - strand, within PfGW456L13_429 at 494.928 kb on - strand at 494.928 kb on - strand at 494.928 kb on - strand at 494.928 kb on - strand at 494.931 kb on + strand at 494.931 kb on + strand at 494.931 kb on + strand at 494.932 kb on - strand at 494.932 kb on - strand at 494.932 kb on - strand at 494.932 kb on - strand at 494.932 kb on - strand at 494.932 kb on - strand at 494.965 kb on + strand at 494.965 kb on + strand at 494.965 kb on + strand at 494.965 kb on + strand at 494.965 kb on + strand at 494.965 kb on + strand at 494.965 kb on + strand at 494.965 kb on + strand at 494.965 kb on + strand at 494.966 kb on - strand at 494.966 kb on - strand at 494.966 kb on - strand at 494.966 kb on - strand at 494.966 kb on - strand at 494.966 kb on - strand at 494.966 kb on - strand at 494.966 kb on - strand at 494.966 kb on - strand at 494.966 kb on - strand at 494.966 kb on - strand at 494.966 kb on - strand at 494.966 kb on - strand at 494.966 kb on - strand at 494.966 kb on - strand at 494.966 kb on - strand at 494.975 kb on - strand at 494.975 kb on - strand at 495.069 kb on - strand at 495.095 kb on + strand at 495.109 kb on + strand at 495.110 kb on - strand at 495.110 kb on - strand at 495.110 kb on - strand at 495.110 kb on - strand at 495.461 kb on + strand, within PfGW456L13_430 at 495.461 kb on + strand, within PfGW456L13_430 at 495.461 kb on + strand, within PfGW456L13_430 at 495.462 kb on - strand, within PfGW456L13_430 at 495.522 kb on - strand, within PfGW456L13_430 at 495.554 kb on + strand, within PfGW456L13_430 at 495.554 kb on + strand, within PfGW456L13_430 at 495.554 kb on + strand, within PfGW456L13_430 at 495.555 kb on - strand, within PfGW456L13_430 at 495.555 kb on - strand, within PfGW456L13_430 at 495.555 kb on - strand, within PfGW456L13_430 at 495.555 kb on - strand, within PfGW456L13_430 at 495.620 kb on + strand, within PfGW456L13_430 at 495.620 kb on + strand, within PfGW456L13_430 at 495.710 kb on + strand, within PfGW456L13_430 at 495.710 kb on + strand, within PfGW456L13_430 at 495.710 kb on + strand, within PfGW456L13_430 at 495.710 kb on + strand, within PfGW456L13_430 at 495.710 kb on + strand, within PfGW456L13_430 at 495.710 kb on + strand, within PfGW456L13_430 at 495.711 kb on - strand, within PfGW456L13_430 at 495.711 kb on - strand, within PfGW456L13_430 at 495.711 kb on - strand, within PfGW456L13_430 at 495.713 kb on - strand, within PfGW456L13_430 at 495.750 kb on + strand, within PfGW456L13_430 at 495.758 kb on + strand, within PfGW456L13_430 at 495.758 kb on + strand, within PfGW456L13_430 at 495.758 kb on + strand, within PfGW456L13_430 at 495.759 kb on - strand, within PfGW456L13_430 at 495.759 kb on - strand, within PfGW456L13_430 at 495.759 kb on - strand, within PfGW456L13_430 at 495.845 kb on + strand, within PfGW456L13_430 at 495.846 kb on - strand, within PfGW456L13_430 at 495.846 kb on - strand, within PfGW456L13_430 at 495.846 kb on - strand, within PfGW456L13_430 at 495.923 kb on + strand, within PfGW456L13_430 at 495.923 kb on + strand, within PfGW456L13_430 at 495.923 kb on + strand, within PfGW456L13_430 at 495.923 kb on + strand, within PfGW456L13_430 at 495.941 kb on + strand, within PfGW456L13_430 at 495.942 kb on - strand, within PfGW456L13_430 at 495.942 kb on - strand, within PfGW456L13_430 at 495.987 kb on - strand, within PfGW456L13_430 at 496.061 kb on + strand, within PfGW456L13_430 at 496.061 kb on + strand, within PfGW456L13_430 at 496.062 kb on - strand, within PfGW456L13_430 at 496.094 kb on + strand, within PfGW456L13_430 at 496.095 kb on - strand, within PfGW456L13_430 at 496.095 kb on - strand, within PfGW456L13_430 at 496.095 kb on - strand, within PfGW456L13_430 at 496.095 kb on - strand, within PfGW456L13_430 at 496.095 kb on - strand, within PfGW456L13_430 at 496.143 kb on - strand, within PfGW456L13_430 at 496.153 kb on - strand, within PfGW456L13_430 at 496.153 kb on - strand, within PfGW456L13_430 at 496.153 kb on - strand, within PfGW456L13_430 at 496.715 kb on + strand at 496.741 kb on + strand at 496.741 kb on + strand at 496.742 kb on - strand at 496.742 kb on - strand at 496.742 kb on - strand at 496.745 kb on + strand at 496.745 kb on + strand at 496.745 kb on + strand at 496.745 kb on + strand at 496.746 kb on - strand at 496.770 kb on + strand at 496.833 kb on + strand at 496.833 kb on + strand at 496.872 kb on - strand at 497.015 kb on - strand at 497.015 kb on - strand at 497.015 kb on - strand at 497.015 kb on - strand at 497.133 kb on + strand, within PfGW456L13_431 at 497.157 kb on - strand, within PfGW456L13_431 at 497.189 kb on + strand, within PfGW456L13_431 at 497.394 kb on - strand, within PfGW456L13_431 at 497.394 kb on - strand, within PfGW456L13_431 at 497.394 kb on - strand, within PfGW456L13_431 at 497.395 kb on + strand, within PfGW456L13_431 at 497.409 kb on + strand, within PfGW456L13_431 at 497.409 kb on + strand, within PfGW456L13_431 at 497.409 kb on + strand, within PfGW456L13_431 at 497.409 kb on + strand, within PfGW456L13_431 at 497.410 kb on - strand, within PfGW456L13_431 at 497.526 kb on + strand, within PfGW456L13_431 at 497.527 kb on - strand, within PfGW456L13_431 at 497.527 kb on - strand, within PfGW456L13_431 at 497.527 kb on - strand, within PfGW456L13_431 at 497.700 kb on + strand, within PfGW456L13_431
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 494,176 + PfGW456L13_428 0.84 -0.8 494,176 + PfGW456L13_428 0.84 +0.5 494,176 + PfGW456L13_428 0.84 -0.4 494,176 + PfGW456L13_428 0.84 -0.4 494,176 + PfGW456L13_428 0.84 -1.3 494,177 - PfGW456L13_428 0.84 +0.2 494,177 - PfGW456L13_428 0.84 +0.5 494,177 - PfGW456L13_428 0.84 +0.6 494,177 - PfGW456L13_428 0.84 +0.3 494,786 + PfGW456L13_429 0.62 +0.1 494,786 + PfGW456L13_429 0.62 +0.6 494,786 + PfGW456L13_429 0.62 +0.5 494,786 + PfGW456L13_429 0.62 -0.3 494,786 + PfGW456L13_429 0.62 -1.4 494,786 + PfGW456L13_429 0.62 -0.4 494,786 + PfGW456L13_429 0.62 -1.8 494,787 - PfGW456L13_429 0.63 -1.5 494,787 - PfGW456L13_429 0.63 -0.9 494,787 - PfGW456L13_429 0.63 +1.2 494,787 - PfGW456L13_429 0.63 +0.8 494,787 - PfGW456L13_429 0.63 -0.5 494,787 - PfGW456L13_429 0.63 +0.6 494,787 - PfGW456L13_429 0.63 +1.6 494,787 - PfGW456L13_429 0.63 +0.2 494,928 - +1.2 494,928 - +1.0 494,928 - -0.2 494,928 - -0.4 494,931 + +0.0 494,931 + -1.6 494,931 + +0.5 494,932 - -1.8 494,932 - -0.4 494,932 - -1.2 494,932 - -0.0 494,932 - -0.2 494,932 - -2.5 494,965 + -0.5 494,965 + +0.9 494,965 + +0.2 494,965 + -0.2 494,965 + -1.5 494,965 + +0.1 494,965 + -0.7 494,965 + +0.9 494,965 + -2.4 494,966 - +0.8 494,966 - -2.2 494,966 - -0.1 494,966 - +0.2 494,966 - -1.3 494,966 - -0.7 494,966 - -0.5 494,966 - -0.6 494,966 - -0.3 494,966 - +1.1 494,966 - -1.5 494,966 - +2.0 494,966 - -0.0 494,966 - +0.4 494,966 - -0.3 494,966 - -0.1 494,975 - -2.5 494,975 - +0.8 495,069 - +0.4 495,095 + +0.7 495,109 + +0.6 495,110 - -3.1 495,110 - -2.2 495,110 - +1.2 495,110 - -1.4 495,461 + PfGW456L13_430 0.19 -1.9 495,461 + PfGW456L13_430 0.19 -0.2 495,461 + PfGW456L13_430 0.19 -2.0 495,462 - PfGW456L13_430 0.19 +1.4 495,522 - PfGW456L13_430 0.23 -1.7 495,554 + PfGW456L13_430 0.25 -1.6 495,554 + PfGW456L13_430 0.25 -0.5 495,554 + PfGW456L13_430 0.25 -2.6 495,555 - PfGW456L13_430 0.25 -1.9 495,555 - PfGW456L13_430 0.25 -0.6 495,555 - PfGW456L13_430 0.25 -0.9 495,555 - PfGW456L13_430 0.25 -1.2 495,620 + PfGW456L13_430 0.29 -1.6 495,620 + PfGW456L13_430 0.29 -1.4 495,710 + PfGW456L13_430 0.34 -1.3 495,710 + PfGW456L13_430 0.34 -3.1 495,710 + PfGW456L13_430 0.34 -2.7 495,710 + PfGW456L13_430 0.34 -1.4 495,710 + PfGW456L13_430 0.34 -1.4 495,710 + PfGW456L13_430 0.34 -2.2 495,711 - PfGW456L13_430 0.35 -1.7 495,711 - PfGW456L13_430 0.35 -0.9 495,711 - PfGW456L13_430 0.35 -1.0 495,713 - PfGW456L13_430 0.35 -1.6 495,750 + PfGW456L13_430 0.37 -1.6 495,758 + PfGW456L13_430 0.38 -1.7 495,758 + PfGW456L13_430 0.38 -0.9 495,758 + PfGW456L13_430 0.38 -1.8 495,759 - PfGW456L13_430 0.38 +2.4 495,759 - PfGW456L13_430 0.38 -0.3 495,759 - PfGW456L13_430 0.38 -1.6 495,845 + PfGW456L13_430 0.43 -1.2 495,846 - PfGW456L13_430 0.43 -1.0 495,846 - PfGW456L13_430 0.43 -1.4 495,846 - PfGW456L13_430 0.43 -0.6 495,923 + PfGW456L13_430 0.48 -0.5 495,923 + PfGW456L13_430 0.48 -1.7 495,923 + PfGW456L13_430 0.48 -1.6 495,923 + PfGW456L13_430 0.48 -0.9 495,941 + PfGW456L13_430 0.49 -2.7 495,942 - PfGW456L13_430 0.49 +2.9 495,942 - PfGW456L13_430 0.49 -2.3 495,987 - PfGW456L13_430 0.52 -2.5 496,061 + PfGW456L13_430 0.57 -1.4 496,061 + PfGW456L13_430 0.57 -0.2 496,062 - PfGW456L13_430 0.57 -1.4 496,094 + PfGW456L13_430 0.59 -1.4 496,095 - PfGW456L13_430 0.59 +1.4 496,095 - PfGW456L13_430 0.59 -2.9 496,095 - PfGW456L13_430 0.59 -1.2 496,095 - PfGW456L13_430 0.59 -2.3 496,095 - PfGW456L13_430 0.59 -2.3 496,143 - PfGW456L13_430 0.62 -2.7 496,153 - PfGW456L13_430 0.62 -1.7 496,153 - PfGW456L13_430 0.62 -2.3 496,153 - PfGW456L13_430 0.62 -2.6 496,715 + -0.9 496,741 + +1.2 496,741 + +0.1 496,742 - -0.3 496,742 - -0.7 496,742 - +0.7 496,745 + -4.6 496,745 + -2.0 496,745 + -0.9 496,745 + +0.4 496,746 - -0.8 496,770 + -1.2 496,833 + -0.6 496,833 + -1.6 496,872 - +0.9 497,015 - +0.8 497,015 - +0.8 497,015 - +0.6 497,015 - +0.2 497,133 + PfGW456L13_431 0.14 -0.9 497,157 - PfGW456L13_431 0.17 +0.2 497,189 + PfGW456L13_431 0.20 -0.2 497,394 - PfGW456L13_431 0.41 +1.8 497,394 - PfGW456L13_431 0.41 +2.8 497,394 - PfGW456L13_431 0.41 +0.6 497,395 + PfGW456L13_431 0.41 -0.4 497,409 + PfGW456L13_431 0.42 +0.8 497,409 + PfGW456L13_431 0.42 -0.5 497,409 + PfGW456L13_431 0.42 -2.3 497,409 + PfGW456L13_431 0.42 +0.5 497,410 - PfGW456L13_431 0.42 -0.1 497,526 + PfGW456L13_431 0.54 -1.5 497,527 - PfGW456L13_431 0.54 -0.2 497,527 - PfGW456L13_431 0.54 -1.7 497,527 - PfGW456L13_431 0.54 -0.5 497,700 + PfGW456L13_431 0.72 +1.3
Or see this region's nucleotide sequence