Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4197

Experiment: L-Tryptophan (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Tryptophan (C)
4,706,675	+		PfGW456L13_4195	0.68	-0.0
4,706,737	+		PfGW456L13_4195	0.73	-0.1
4,706,737	+		PfGW456L13_4195	0.73	+0.9
4,706,737	+		PfGW456L13_4195	0.73	+2.0
4,706,738	-		PfGW456L13_4195	0.73	+0.4
4,706,738	-		PfGW456L13_4195	0.73	-0.2
4,706,738	-		PfGW456L13_4195	0.73	-1.3
4,706,891	+		PfGW456L13_4195	0.85	+0.4
4,707,058	+				+1.8
4,707,058	+				+0.8
4,707,058	+				-2.7
4,707,058	+				+0.4
4,707,059	-				-3.6
4,707,059	-				-1.6
4,707,059	-				-0.1
4,707,091	+				+0.5
4,707,092	-				-0.7
4,707,092	-				-0.3
4,707,098	+				-1.9
4,707,099	-				-1.7
4,707,133	+				+1.3
4,707,193	-		PfGW456L13_4196	0.24	-0.9
4,707,193	-		PfGW456L13_4196	0.24	-0.8
4,707,232	+		PfGW456L13_4196	0.36	-0.0
4,707,233	-		PfGW456L13_4196	0.37	-0.8
4,707,270	+		PfGW456L13_4196	0.48	-1.7
4,707,271	-		PfGW456L13_4196	0.49	-1.9
4,707,271	-		PfGW456L13_4196	0.49	+0.6
4,707,430	+				+1.7
4,707,431	-				+0.7
4,707,471	+				-2.8
4,707,471	+				-3.3
4,707,471	+				-0.2
4,707,471	+				+1.9
4,707,471	+				+1.0
4,707,472	-				+0.4
4,707,509	+				+1.3
4,707,510	-				-0.3
4,707,540	+				+1.0
4,707,541	-				-0.3
4,707,541	-				-1.2
4,707,780	-		PfGW456L13_4197	0.11	-3.2
4,707,780	-		PfGW456L13_4197	0.11	-1.5
4,708,117	+		PfGW456L13_4197	0.27	-0.7
4,708,117	+		PfGW456L13_4197	0.27	-0.5
4,708,117	+		PfGW456L13_4197	0.27	-0.7
4,708,118	-		PfGW456L13_4197	0.27	-2.1
4,708,118	-		PfGW456L13_4197	0.27	-3.5
4,708,126	+		PfGW456L13_4197	0.27	+0.3
4,708,126	+		PfGW456L13_4197	0.27	+0.8
4,708,126	+		PfGW456L13_4197	0.27	+0.0
4,708,127	-		PfGW456L13_4197	0.27	+0.0
4,708,127	-		PfGW456L13_4197	0.27	-2.0
4,708,127	-		PfGW456L13_4197	0.27	-0.2
4,708,127	-		PfGW456L13_4197	0.27	-0.6
4,708,175	-		PfGW456L13_4197	0.29	+2.5
4,708,175	-		PfGW456L13_4197	0.29	+0.2
4,708,175	-		PfGW456L13_4197	0.29	+0.2
4,708,261	+		PfGW456L13_4197	0.33	+1.9
4,708,261	+		PfGW456L13_4197	0.33	-2.3
4,708,261	+		PfGW456L13_4197	0.33	+1.1
4,708,262	-		PfGW456L13_4197	0.33	-0.5
4,708,262	-				+0.9
4,708,262	-		PfGW456L13_4197	0.33	-0.4
4,708,262	-		PfGW456L13_4197	0.33	+1.2
4,708,262	-		PfGW456L13_4197	0.33	-0.6
4,708,262	-		PfGW456L13_4197	0.33	+0.7
4,708,262	-		PfGW456L13_4197	0.33	+0.4
4,708,262	-		PfGW456L13_4197	0.33	-0.4
4,708,262	-		PfGW456L13_4197	0.33	-0.4
4,708,262	-		PfGW456L13_4197	0.33	-0.4
4,708,262	-		PfGW456L13_4197	0.33	-1.0
4,708,262	-		PfGW456L13_4197	0.33	+0.3
4,708,262	-		PfGW456L13_4197	0.33	+0.2
4,708,262	-		PfGW456L13_4197	0.33	-2.9
4,708,262	-		PfGW456L13_4197	0.33	-2.7
4,708,262	-		PfGW456L13_4197	0.33	-1.0
4,708,540	+		PfGW456L13_4197	0.47	-2.9
4,708,541	-		PfGW456L13_4197	0.47	-1.4
4,708,541	-		PfGW456L13_4197	0.47	+0.7
4,708,677	-		PfGW456L13_4197	0.53	-2.1
4,708,726	+		PfGW456L13_4197	0.55	+1.9
4,708,726	+				+2.2
4,708,753	+		PfGW456L13_4197	0.57	+1.5
4,708,753	+		PfGW456L13_4197	0.57	-2.7
4,708,753	+		PfGW456L13_4197	0.57	-0.2
4,708,753	+		PfGW456L13_4197	0.57	+0.5
4,708,753	+		PfGW456L13_4197	0.57	-0.5
4,708,754	-		PfGW456L13_4197	0.57	+0.3
4,708,754	-		PfGW456L13_4197	0.57	+0.6
4,709,197	+		PfGW456L13_4197	0.78	-0.7
4,709,197	+		PfGW456L13_4197	0.78	+1.0
4,709,197	+		PfGW456L13_4197	0.78	+1.3
4,709,198	-		PfGW456L13_4197	0.78	+0.2
4,709,248	-		PfGW456L13_4197	0.80	-0.6
4,709,320	+		PfGW456L13_4197	0.84	-0.7
4,709,321	-		PfGW456L13_4197	0.84	-1.6
4,709,321	-		PfGW456L13_4197	0.84	-0.0
4,709,321	-		PfGW456L13_4197	0.84	-1.6
4,709,338	+		PfGW456L13_4197	0.85	-1.1
4,709,448	+		PfGW456L13_4197	0.90	+0.9
4,709,449	-		PfGW456L13_4197	0.90	+1.5
4,709,449	-		PfGW456L13_4197	0.90	-1.5
4,709,449	-		PfGW456L13_4197	0.90	-0.6
4,709,633	+				+0.9
4,709,633	+				-1.5
4,709,633	+				-0.8
4,709,634	-				-1.9
4,709,634	-				-1.5
4,709,730	+				-1.7
4,709,755	+				+0.6
4,709,770	+				-0.4
4,709,771	-				+0.7
4,709,771	-				+0.2
4,709,771	-				-2.2
4,709,854	+				-2.2
4,709,858	+				-0.1
4,709,859	-				-0.1
4,710,003	+				+0.3
4,710,004	-				-0.2
4,710,004	-				-0.7
4,710,052	+				+3.1
4,710,052	+				-0.5
4,710,052	+				+0.9
4,710,052	+				-0.9
4,710,085	+				+0.2
4,710,161	+				-1.5
4,710,165	+				+0.7
4,710,192	+				-3.1
4,710,259	-				+0.9
4,710,317	+				-0.7
4,710,366	-				-2.0
4,710,455	+				+0.9
4,710,488	-				-3.7
4,710,563	+		PfGW456L13_4198	0.11	+0.0
4,710,563	+		PfGW456L13_4198	0.11	-0.2
4,710,563	+		PfGW456L13_4198	0.11	-0.1
4,710,564	-		PfGW456L13_4198	0.12	-4.2
4,710,564	-		PfGW456L13_4198	0.12	+0.2
4,710,564	-		PfGW456L13_4198	0.12	+0.1
4,710,564	-		PfGW456L13_4198	0.12	+0.2
4,710,564	-		PfGW456L13_4198	0.12	-3.8
4,710,564	-		PfGW456L13_4198	0.12	-0.7
4,710,568	-		PfGW456L13_4198	0.12	-0.5
4,710,642	+		PfGW456L13_4198	0.23	-0.8
4,710,643	-		PfGW456L13_4198	0.23	-0.4
4,710,647	-		PfGW456L13_4198	0.23	-0.8
4,710,647	-		PfGW456L13_4198	0.23	-1.5
4,710,647	-		PfGW456L13_4198	0.23	-0.5
4,710,647	-		PfGW456L13_4198	0.23	+0.4
4,710,647	-		PfGW456L13_4198	0.23	-0.7
4,710,647	-		PfGW456L13_4198	0.23	+0.9
4,710,647	-		PfGW456L13_4198	0.23	-0.4
4,710,647	-		PfGW456L13_4198	0.23	-1.4