Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3822

Experiment: L-Tryptophan (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Tryptophan (C)
4,288,367	+		PfGW456L13_3821	0.18	-1.6
4,288,368	-		PfGW456L13_3821	0.18	-2.2
4,288,368	-		PfGW456L13_3821	0.18	+0.1
4,288,368	-		PfGW456L13_3821	0.18	+0.3
4,288,368	-		PfGW456L13_3821	0.18	+0.8
4,288,371	+		PfGW456L13_3821	0.19	-1.0
4,288,371	+		PfGW456L13_3821	0.19	-0.7
4,288,414	-		PfGW456L13_3821	0.23	+0.7
4,288,491	+		PfGW456L13_3821	0.31	+2.2
4,288,492	-		PfGW456L13_3821	0.31	-0.1
4,288,593	+		PfGW456L13_3821	0.42	+1.7
4,288,593	+		PfGW456L13_3821	0.42	+1.4
4,288,593	+		PfGW456L13_3821	0.42	-0.9
4,288,593	+		PfGW456L13_3821	0.42	+0.7
4,288,593	+		PfGW456L13_3821	0.42	-0.8
4,288,593	+		PfGW456L13_3821	0.42	+0.2
4,288,593	+		PfGW456L13_3821	0.42	-1.6
4,288,725	+		PfGW456L13_3821	0.55	-0.5
4,288,807	-		PfGW456L13_3821	0.64	-0.3
4,288,807	-		PfGW456L13_3821	0.64	-2.0
4,288,863	+		PfGW456L13_3821	0.70	+0.4
4,288,863	+		PfGW456L13_3821	0.70	-2.2
4,288,863	+		PfGW456L13_3821	0.70	-0.3
4,288,863	+		PfGW456L13_3821	0.70	+0.2
4,288,864	-		PfGW456L13_3821	0.70	-0.5
4,288,864	-		PfGW456L13_3821	0.70	+1.2
4,288,864	-		PfGW456L13_3821	0.70	+0.2
4,288,864	-		PfGW456L13_3821	0.70	+1.7
4,288,864	-		PfGW456L13_3821	0.70	+0.4
4,288,864	-		PfGW456L13_3821	0.70	+0.7
4,288,864	-		PfGW456L13_3821	0.70	+2.7
4,288,864	-		PfGW456L13_3821	0.70	+0.2
4,288,864	-		PfGW456L13_3821	0.70	-0.5
4,288,864	-		PfGW456L13_3821	0.70	+0.2
4,288,864	-		PfGW456L13_3821	0.70	+1.1
4,288,923	+		PfGW456L13_3821	0.76	-2.4
4,288,923	+		PfGW456L13_3821	0.76	-0.6
4,288,923	+		PfGW456L13_3821	0.76	-1.5
4,288,923	+		PfGW456L13_3821	0.76	-0.3
4,288,923	+		PfGW456L13_3821	0.76	+1.4
4,288,923	+		PfGW456L13_3821	0.76	-0.6
4,288,923	+		PfGW456L13_3821	0.76	-0.6
4,288,923	+		PfGW456L13_3821	0.76	+1.9
4,288,923	+		PfGW456L13_3821	0.76	-0.7
4,288,924	-		PfGW456L13_3821	0.76	+0.7
4,288,924	-				+1.7
4,288,924	-		PfGW456L13_3821	0.76	-3.2
4,288,924	-		PfGW456L13_3821	0.76	-2.7
4,288,924	-		PfGW456L13_3821	0.76	+0.2
4,288,924	-		PfGW456L13_3821	0.76	+0.3
4,288,924	-		PfGW456L13_3821	0.76	+2.3
4,288,924	-		PfGW456L13_3821	0.76	-1.1
4,288,924	-		PfGW456L13_3821	0.76	-1.8
4,288,927	+		PfGW456L13_3821	0.76	-1.8
4,288,927	+		PfGW456L13_3821	0.76	-2.2
4,288,927	+		PfGW456L13_3821	0.76	-0.2
4,288,927	+		PfGW456L13_3821	0.76	-0.4
4,288,927	+		PfGW456L13_3821	0.76	-0.3
4,288,927	+		PfGW456L13_3821	0.76	-2.5
4,288,927	+		PfGW456L13_3821	0.76	-0.5
4,288,927	+		PfGW456L13_3821	0.76	-0.7
4,288,927	+		PfGW456L13_3821	0.76	+1.2
4,288,928	-		PfGW456L13_3821	0.77	+0.0
4,288,928	-		PfGW456L13_3821	0.77	+1.4
4,288,928	-		PfGW456L13_3821	0.77	-3.3
4,288,928	-		PfGW456L13_3821	0.77	+1.0
4,288,928	-		PfGW456L13_3821	0.77	+0.4
4,288,928	-		PfGW456L13_3821	0.77	+0.0
4,288,968	+		PfGW456L13_3821	0.81	-2.8
4,288,969	-		PfGW456L13_3821	0.81	+1.2
4,289,114	+				+2.9
4,289,115	-				+0.5
4,289,173	+				+1.2
4,289,174	-				-0.7
4,289,175	+				-0.8
4,289,175	+				-1.0
4,289,176	-				+0.4
4,289,176	-				-0.8
4,289,176	-				+0.8
4,289,176	-				-0.3
4,289,176	-				+0.7
4,289,176	-				-0.1
4,289,176	-				-2.4
4,289,176	-				-0.2
4,289,195	+				-0.1
4,289,195	+				-1.4
4,289,196	-				+0.3
4,289,196	-				-0.2
4,289,196	-				+0.0
4,289,234	+				-1.2
4,289,303	+				-1.4
4,289,304	-				-0.8
4,289,304	-				-2.7
4,289,304	-				-1.5
4,289,362	+				-2.5
4,289,363	-				-2.4
4,289,560	+		PfGW456L13_3822	0.21	-2.1
4,289,561	-		PfGW456L13_3822	0.21	-1.4
4,289,561	-		PfGW456L13_3822	0.21	-1.1
4,289,561	-		PfGW456L13_3822	0.21	-2.8
4,289,801	-		PfGW456L13_3822	0.47	-1.7
4,289,806	+		PfGW456L13_3822	0.48	-1.5
4,289,806	+		PfGW456L13_3822	0.48	-3.3
4,289,806	+		PfGW456L13_3822	0.48	-2.3
4,289,807	-		PfGW456L13_3822	0.48	-3.6
4,289,807	-		PfGW456L13_3822	0.48	-2.4
4,289,807	-		PfGW456L13_3822	0.48	+0.9
4,289,965	+		PfGW456L13_3822	0.65	-3.6
4,289,965	+				-1.8
4,289,965	+		PfGW456L13_3822	0.65	-2.0
4,289,965	+		PfGW456L13_3822	0.65	-1.6
4,289,965	+		PfGW456L13_3822	0.65	-2.1
4,289,966	-		PfGW456L13_3822	0.65	-2.7
4,290,047	-		PfGW456L13_3822	0.73	-0.5
4,290,047	-		PfGW456L13_3822	0.73	-1.0
4,290,047	-		PfGW456L13_3822	0.73	-1.4
4,290,047	-		PfGW456L13_3822	0.73	-2.0
4,290,047	-		PfGW456L13_3822	0.73	-1.3
4,290,112	+		PfGW456L13_3822	0.80	-1.7
4,290,113	-		PfGW456L13_3822	0.81	-3.3
4,290,190	+		PfGW456L13_3822	0.89	-0.7
4,290,191	-		PfGW456L13_3822	0.89	-1.8
4,290,315	+				-3.3
4,290,315	+				-2.8
4,290,315	+				-2.4
4,290,316	-				-2.4
4,290,316	-				-1.6
4,290,319	+				-3.1
4,290,320	-				-0.3
4,290,323	-				-0.7
4,290,327	+				-1.6
4,290,328	-				-0.3
4,290,414	-		PfGW456L13_3823	0.22	-3.6
4,290,427	+		PfGW456L13_3823	0.27	-3.1
4,290,482	+		PfGW456L13_3823	0.46	-1.3
4,290,482	+		PfGW456L13_3823	0.46	-2.6
4,290,482	+		PfGW456L13_3823	0.46	-1.4
4,290,483	-		PfGW456L13_3823	0.46	-2.8
4,290,483	-		PfGW456L13_3823	0.46	-3.5
4,290,483	-		PfGW456L13_3823	0.46	-4.4
4,290,483	-		PfGW456L13_3823	0.46	+0.2
4,290,492	-		PfGW456L13_3823	0.49	-2.3
4,290,639	+				-2.4
4,290,639	+				-0.8
4,290,639	+				-0.8
4,290,639	+				-1.7
4,290,639	+				-2.3
4,290,639	+				-2.1
4,290,640	-				-3.1
4,290,640	-				-1.5
4,290,640	-				-0.7
4,290,950	+		PfGW456L13_3824	0.24	-2.5
4,290,951	-		PfGW456L13_3824	0.24	-3.1
4,290,951	-		PfGW456L13_3824	0.24	-3.5