Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_372 and PfGW456L13_373 are separated by 38 nucleotides PfGW456L13_373 and PfGW456L13_374 are separated by 6 nucleotides PfGW456L13_374 and PfGW456L13_375 are separated by 71 nucleotides PfGW456L13_375 and PfGW456L13_376 are separated by 564 nucleotides
PfGW456L13_372 - Hydrolases of the alpha/beta superfamily, at 432,196 to 433,170
_372
PfGW456L13_373 - FIG00954739: hypothetical protein, at 433,209 to 433,631
_373
PfGW456L13_374 - FIG00954739: hypothetical protein, at 433,638 to 434,090
_374
PfGW456L13_375 - transport permease protein of gamma-aminobutyrate, at 434,162 to 435,553
_375
PfGW456L13_376 - Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1), at 436,118 to 436,891
_376
Position (kb) 434
435
436 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 433.195 kb on - strand at 433.360 kb on + strand at 433.360 kb on + strand, within PfGW456L13_373 at 433.360 kb on + strand, within PfGW456L13_373 at 433.361 kb on - strand, within PfGW456L13_373 at 433.361 kb on - strand, within PfGW456L13_373 at 433.446 kb on + strand, within PfGW456L13_373 at 433.446 kb on + strand, within PfGW456L13_373 at 433.447 kb on - strand, within PfGW456L13_373 at 433.447 kb on - strand, within PfGW456L13_373 at 433.578 kb on + strand, within PfGW456L13_373 at 433.578 kb on + strand, within PfGW456L13_373 at 433.579 kb on - strand, within PfGW456L13_373 at 433.704 kb on - strand, within PfGW456L13_374 at 433.770 kb on + strand, within PfGW456L13_374 at 433.770 kb on + strand, within PfGW456L13_374 at 433.770 kb on + strand, within PfGW456L13_374 at 433.771 kb on - strand, within PfGW456L13_374 at 433.771 kb on - strand, within PfGW456L13_374 at 433.771 kb on - strand, within PfGW456L13_374 at 433.859 kb on + strand, within PfGW456L13_374 at 434.174 kb on + strand at 434.175 kb on - strand at 434.331 kb on + strand, within PfGW456L13_375 at 434.331 kb on + strand, within PfGW456L13_375 at 434.332 kb on - strand, within PfGW456L13_375 at 434.386 kb on + strand, within PfGW456L13_375 at 434.386 kb on + strand, within PfGW456L13_375 at 434.387 kb on - strand, within PfGW456L13_375 at 434.387 kb on - strand, within PfGW456L13_375 at 434.387 kb on - strand, within PfGW456L13_375 at 434.431 kb on - strand, within PfGW456L13_375 at 434.496 kb on + strand, within PfGW456L13_375 at 434.496 kb on + strand, within PfGW456L13_375 at 434.496 kb on + strand, within PfGW456L13_375 at 434.496 kb on + strand, within PfGW456L13_375 at 434.496 kb on + strand, within PfGW456L13_375 at 434.496 kb on + strand, within PfGW456L13_375 at 434.496 kb on + strand, within PfGW456L13_375 at 434.496 kb on + strand, within PfGW456L13_375 at 434.496 kb on + strand, within PfGW456L13_375 at 434.497 kb on - strand, within PfGW456L13_375 at 434.497 kb on - strand, within PfGW456L13_375 at 434.497 kb on - strand, within PfGW456L13_375 at 434.497 kb on - strand, within PfGW456L13_375 at 434.497 kb on - strand, within PfGW456L13_375 at 434.497 kb on - strand, within PfGW456L13_375 at 434.497 kb on - strand, within PfGW456L13_375 at 434.497 kb on - strand, within PfGW456L13_375 at 434.497 kb on - strand, within PfGW456L13_375 at 434.550 kb on + strand, within PfGW456L13_375 at 434.637 kb on + strand, within PfGW456L13_375 at 434.637 kb on + strand, within PfGW456L13_375 at 434.638 kb on - strand, within PfGW456L13_375 at 434.638 kb on - strand, within PfGW456L13_375 at 434.638 kb on - strand, within PfGW456L13_375 at 434.726 kb on + strand, within PfGW456L13_375 at 434.726 kb on + strand, within PfGW456L13_375 at 434.726 kb on + strand, within PfGW456L13_375 at 434.726 kb on + strand, within PfGW456L13_375 at 434.727 kb on - strand, within PfGW456L13_375 at 434.727 kb on - strand, within PfGW456L13_375 at 434.727 kb on - strand, within PfGW456L13_375 at 434.727 kb on - strand, within PfGW456L13_375 at 434.727 kb on - strand, within PfGW456L13_375 at 434.727 kb on - strand, within PfGW456L13_375 at 434.736 kb on + strand, within PfGW456L13_375 at 434.736 kb on + strand, within PfGW456L13_375 at 434.808 kb on + strand, within PfGW456L13_375 at 434.809 kb on - strand, within PfGW456L13_375 at 434.809 kb on - strand, within PfGW456L13_375 at 434.809 kb on - strand, within PfGW456L13_375 at 434.831 kb on - strand, within PfGW456L13_375 at 434.831 kb on - strand, within PfGW456L13_375 at 435.111 kb on + strand, within PfGW456L13_375 at 435.111 kb on + strand, within PfGW456L13_375 at 435.111 kb on + strand, within PfGW456L13_375 at 435.111 kb on + strand, within PfGW456L13_375 at 435.111 kb on + strand, within PfGW456L13_375 at 435.111 kb on + strand, within PfGW456L13_375 at 435.112 kb on - strand, within PfGW456L13_375 at 435.112 kb on - strand, within PfGW456L13_375 at 435.112 kb on - strand, within PfGW456L13_375 at 435.112 kb on - strand, within PfGW456L13_375 at 435.112 kb on - strand, within PfGW456L13_375 at 435.261 kb on + strand, within PfGW456L13_375 at 435.261 kb on + strand, within PfGW456L13_375 at 435.261 kb on + strand, within PfGW456L13_375 at 435.261 kb on + strand, within PfGW456L13_375 at 435.262 kb on - strand, within PfGW456L13_375 at 435.312 kb on + strand, within PfGW456L13_375 at 435.312 kb on + strand, within PfGW456L13_375 at 435.313 kb on - strand, within PfGW456L13_375 at 435.313 kb on - strand, within PfGW456L13_375 at 435.313 kb on - strand, within PfGW456L13_375 at 435.402 kb on + strand, within PfGW456L13_375 at 435.403 kb on - strand, within PfGW456L13_375 at 435.532 kb on + strand at 435.532 kb on + strand at 435.533 kb on - strand at 435.545 kb on - strand at 435.554 kb on + strand at 435.554 kb on + strand at 435.555 kb on - strand at 435.555 kb on - strand at 435.555 kb on - strand at 435.560 kb on + strand at 435.560 kb on + strand at 435.561 kb on - strand at 435.561 kb on - strand at 435.568 kb on + strand at 435.823 kb on + strand at 435.823 kb on + strand at 435.823 kb on + strand at 435.824 kb on - strand at 436.014 kb on - strand at 436.049 kb on + strand at 436.049 kb on + strand at 436.049 kb on + strand at 436.050 kb on - strand at 436.054 kb on + strand at 436.054 kb on + strand at 436.054 kb on + strand at 436.054 kb on + strand at 436.054 kb on + strand at 436.054 kb on + strand at 436.054 kb on + strand at 436.054 kb on + strand at 436.054 kb on + strand at 436.054 kb on + strand at 436.054 kb on + strand at 436.055 kb on - strand at 436.055 kb on - strand at 436.055 kb on - strand at 436.055 kb on - strand at 436.055 kb on - strand at 436.055 kb on - strand at 436.055 kb on - strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.102 kb on + strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.103 kb on - strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.104 kb on + strand at 436.105 kb on - strand at 436.105 kb on - strand at 436.105 kb on - strand at 436.105 kb on - strand at 436.105 kb on - strand at 436.105 kb on - strand at 436.105 kb on - strand at 436.105 kb on - strand at 436.105 kb on - strand at 436.105 kb on - strand at 436.105 kb on - strand at 436.105 kb on - strand at 436.105 kb on - strand at 436.105 kb on - strand at 436.105 kb on - strand at 436.105 kb on - strand at 436.105 kb on - strand at 436.105 kb on - strand at 436.105 kb on - strand at 436.414 kb on - strand, within PfGW456L13_376
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 433,195 - -0.7 433,360 + +1.6 433,360 + PfGW456L13_373 0.36 +0.1 433,360 + PfGW456L13_373 0.36 -0.7 433,361 - PfGW456L13_373 0.36 +0.4 433,361 - PfGW456L13_373 0.36 +0.6 433,446 + PfGW456L13_373 0.56 +0.8 433,446 + PfGW456L13_373 0.56 +0.5 433,447 - PfGW456L13_373 0.56 -2.8 433,447 - PfGW456L13_373 0.56 -0.3 433,578 + PfGW456L13_373 0.87 +1.4 433,578 + PfGW456L13_373 0.87 -0.3 433,579 - PfGW456L13_373 0.87 +0.4 433,704 - PfGW456L13_374 0.15 -0.3 433,770 + PfGW456L13_374 0.29 +0.0 433,770 + PfGW456L13_374 0.29 +0.7 433,770 + PfGW456L13_374 0.29 -0.3 433,771 - PfGW456L13_374 0.29 -0.8 433,771 - PfGW456L13_374 0.29 +1.0 433,771 - PfGW456L13_374 0.29 -0.9 433,859 + PfGW456L13_374 0.49 +0.8 434,174 + +1.8 434,175 - +0.6 434,331 + PfGW456L13_375 0.12 -0.1 434,331 + PfGW456L13_375 0.12 -0.4 434,332 - PfGW456L13_375 0.12 +3.9 434,386 + PfGW456L13_375 0.16 +1.4 434,386 + PfGW456L13_375 0.16 +1.4 434,387 - PfGW456L13_375 0.16 +0.3 434,387 - PfGW456L13_375 0.16 +1.1 434,387 - PfGW456L13_375 0.16 +0.5 434,431 - PfGW456L13_375 0.19 +1.3 434,496 + PfGW456L13_375 0.24 +0.7 434,496 + PfGW456L13_375 0.24 +1.5 434,496 + PfGW456L13_375 0.24 +0.9 434,496 + PfGW456L13_375 0.24 -0.2 434,496 + PfGW456L13_375 0.24 +1.8 434,496 + PfGW456L13_375 0.24 +1.0 434,496 + PfGW456L13_375 0.24 +1.1 434,496 + PfGW456L13_375 0.24 +1.6 434,496 + PfGW456L13_375 0.24 +1.2 434,497 - PfGW456L13_375 0.24 +1.2 434,497 - PfGW456L13_375 0.24 -0.4 434,497 - PfGW456L13_375 0.24 +0.6 434,497 - PfGW456L13_375 0.24 +1.0 434,497 - PfGW456L13_375 0.24 -0.2 434,497 - PfGW456L13_375 0.24 +1.6 434,497 - PfGW456L13_375 0.24 +1.2 434,497 - PfGW456L13_375 0.24 +1.2 434,497 - PfGW456L13_375 0.24 +1.3 434,550 + PfGW456L13_375 0.28 +0.6 434,637 + PfGW456L13_375 0.34 +1.0 434,637 + PfGW456L13_375 0.34 +0.6 434,638 - PfGW456L13_375 0.34 +0.4 434,638 - PfGW456L13_375 0.34 +1.6 434,638 - PfGW456L13_375 0.34 +0.8 434,726 + PfGW456L13_375 0.41 +0.5 434,726 + PfGW456L13_375 0.41 +0.2 434,726 + PfGW456L13_375 0.41 +1.2 434,726 + PfGW456L13_375 0.41 -0.2 434,727 - PfGW456L13_375 0.41 +2.0 434,727 - PfGW456L13_375 0.41 +1.5 434,727 - PfGW456L13_375 0.41 +1.0 434,727 - PfGW456L13_375 0.41 +1.6 434,727 - PfGW456L13_375 0.41 -0.6 434,727 - PfGW456L13_375 0.41 +1.2 434,736 + PfGW456L13_375 0.41 +1.5 434,736 + PfGW456L13_375 0.41 +0.5 434,808 + PfGW456L13_375 0.46 +0.7 434,809 - PfGW456L13_375 0.46 +0.8 434,809 - PfGW456L13_375 0.46 +1.3 434,809 - PfGW456L13_375 0.46 +1.4 434,831 - PfGW456L13_375 0.48 +0.8 434,831 - PfGW456L13_375 0.48 +1.4 435,111 + PfGW456L13_375 0.68 -1.2 435,111 + PfGW456L13_375 0.68 +1.1 435,111 + PfGW456L13_375 0.68 +1.3 435,111 + PfGW456L13_375 0.68 +2.4 435,111 + PfGW456L13_375 0.68 -0.2 435,111 + PfGW456L13_375 0.68 +2.5 435,112 - PfGW456L13_375 0.68 +1.8 435,112 - PfGW456L13_375 0.68 +1.2 435,112 - PfGW456L13_375 0.68 +1.6 435,112 - PfGW456L13_375 0.68 +1.4 435,112 - PfGW456L13_375 0.68 -1.2 435,261 + PfGW456L13_375 0.79 +0.9 435,261 + PfGW456L13_375 0.79 +2.1 435,261 + PfGW456L13_375 0.79 +1.1 435,261 + PfGW456L13_375 0.79 +0.2 435,262 - PfGW456L13_375 0.79 -0.2 435,312 + PfGW456L13_375 0.83 +1.1 435,312 + PfGW456L13_375 0.83 +1.4 435,313 - PfGW456L13_375 0.83 +1.2 435,313 - PfGW456L13_375 0.83 +1.1 435,313 - PfGW456L13_375 0.83 +1.3 435,402 + PfGW456L13_375 0.89 +1.1 435,403 - PfGW456L13_375 0.89 +1.3 435,532 + +2.3 435,532 + +0.8 435,533 - +1.8 435,545 - +1.7 435,554 + +2.5 435,554 + +1.0 435,555 - +1.5 435,555 - +0.2 435,555 - +0.9 435,560 + +0.9 435,560 + +2.1 435,561 - +1.8 435,561 - +1.4 435,568 + +1.8 435,823 + +3.0 435,823 + +1.2 435,823 + +0.8 435,824 - -2.8 436,014 - -1.4 436,049 + -2.1 436,049 + +0.6 436,049 + +1.0 436,050 - +0.1 436,054 + -0.1 436,054 + +0.1 436,054 + +1.3 436,054 + +0.1 436,054 + +0.5 436,054 + -0.8 436,054 + -3.3 436,054 + +0.5 436,054 + +0.4 436,054 + +0.8 436,054 + +0.1 436,055 - -1.3 436,055 - -0.5 436,055 - -0.6 436,055 - -1.0 436,055 - +1.8 436,055 - +1.1 436,055 - -1.6 436,102 + +1.0 436,102 + +0.8 436,102 + +1.3 436,102 + -0.6 436,102 + -0.4 436,102 + +0.4 436,102 + +2.2 436,102 + +0.8 436,102 + -2.4 436,102 + +1.0 436,102 + +0.2 436,102 + -0.3 436,102 + +0.3 436,102 + +0.5 436,102 + +1.4 436,102 + +0.9 436,102 + -1.3 436,102 + +0.9 436,102 + +1.9 436,102 + -0.3 436,102 + +0.5 436,102 + -0.7 436,102 + +1.5 436,102 + -0.2 436,102 + -2.5 436,102 + +1.4 436,102 + +0.1 436,102 + +0.8 436,103 - +1.0 436,103 - -2.3 436,103 - -0.3 436,103 - -1.1 436,103 - +0.0 436,103 - +1.3 436,103 - -0.2 436,103 - -0.3 436,103 - -1.7 436,103 - -0.7 436,103 - +0.3 436,103 - -0.6 436,103 - -0.9 436,103 - -1.9 436,103 - -1.3 436,103 - -2.2 436,103 - -1.2 436,103 - +0.8 436,103 - -0.3 436,103 - -0.3 436,103 - +0.3 436,103 - -0.8 436,103 - -0.2 436,103 - +0.7 436,103 - +0.6 436,103 - +0.4 436,103 - +1.2 436,103 - -0.9 436,103 - -0.5 436,103 - -0.1 436,103 - -1.8 436,103 - -1.5 436,103 - +0.6 436,104 + +1.2 436,104 + -2.4 436,104 + +1.3 436,104 + +0.8 436,104 + -3.1 436,104 + -0.9 436,104 + -0.4 436,104 + -0.1 436,104 + -1.3 436,104 + +0.9 436,104 + +0.4 436,104 + +1.0 436,104 + +0.3 436,104 + +1.5 436,104 + +0.1 436,104 + -0.8 436,104 + +1.2 436,104 + +1.0 436,104 + -0.3 436,104 + -3.0 436,104 + +1.1 436,104 + +0.6 436,104 + +1.2 436,105 - -0.5 436,105 - +0.7 436,105 - -1.6 436,105 - -0.1 436,105 - -1.1 436,105 - -2.9 436,105 - +0.1 436,105 - -2.0 436,105 - -0.8 436,105 - -0.6 436,105 - -0.9 436,105 - -0.6 436,105 - -0.3 436,105 - -1.8 436,105 - -0.5 436,105 - +0.1 436,105 - -0.0 436,105 - -2.0 436,105 - -2.5 436,414 - PfGW456L13_376 0.38 +1.2
Or see this region's nucleotide sequence