Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3725

Experiment: L-Tryptophan (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Tryptophan (C)
4,189,791	+		PfGW456L13_3724	0.69	+0.6
4,189,791	+		PfGW456L13_3724	0.69	+1.1
4,189,792	-		PfGW456L13_3724	0.70	-0.4
4,189,792	-		PfGW456L13_3724	0.70	+0.0
4,190,031	+		PfGW456L13_3724	0.84	-0.1
4,190,031	+		PfGW456L13_3724	0.84	+0.2
4,190,031	+		PfGW456L13_3724	0.84	-1.4
4,190,031	+		PfGW456L13_3724	0.84	-0.3
4,190,031	+		PfGW456L13_3724	0.84	+0.5
4,190,032	-		PfGW456L13_3724	0.84	-0.5
4,190,032	-		PfGW456L13_3724	0.84	-0.1
4,190,032	-		PfGW456L13_3724	0.84	+0.2
4,190,032	-		PfGW456L13_3724	0.84	+0.9
4,190,201	+				-0.3
4,190,202	-				-0.1
4,190,202	-				+0.7
4,190,202	-				+1.6
4,190,287	+				+1.8
4,190,288	-				-0.1
4,190,297	+				-0.0
4,190,297	+				-1.7
4,190,297	+				-1.3
4,190,297	+				-1.1
4,190,298	-				-1.3
4,190,304	+				-0.2
4,190,304	+				+0.1
4,190,304	+				-0.6
4,190,305	-				-1.0
4,190,305	-				+1.7
4,190,305	-				-0.5
4,190,305	-				+0.6
4,190,305	-				+0.3
4,190,305	-				+0.2
4,190,305	-				+0.1
4,190,305	-				+0.7
4,190,309	+				-2.9
4,190,309	+				-1.3
4,190,309	+				-2.9
4,190,310	-				-0.6
4,190,310	-				-0.0
4,190,310	-				+0.7
4,190,310	-				+0.2
4,190,310	-				-0.5
4,190,310	-				+0.1
4,190,310	-				+0.4
4,190,432	+				-0.6
4,190,432	+				-0.9
4,190,432	+				+1.7
4,190,432	+				+0.3
4,190,432	+				-0.9
4,190,432	+				+1.3
4,190,433	-				-1.3
4,190,433	-				-1.1
4,190,433	-				+0.5
4,190,458	-				+1.1
4,190,463	+				+1.1
4,190,476	+				+0.1
4,190,477	-				+1.1
4,190,477	-				-1.0
4,190,528	+				+0.0
4,190,529	-				-1.6
4,190,529	-				-2.1
4,190,529	-				-1.6
4,190,556	-				-0.5
4,190,623	+				-1.5
4,190,623	+				-0.4
4,190,623	+				+0.7
4,190,623	+				-0.6
4,190,623	+				+1.1
4,190,623	+				+1.2
4,190,623	+				-0.4
4,190,623	+				+0.5
4,190,623	+				+0.1
4,190,624	-				+1.1
4,190,624	-				-0.0
4,190,624	-				+0.8
4,190,624	-				-2.2
4,190,624	-				+1.1
4,190,624	-				+0.0
4,190,624	-				+0.6
4,190,624	-				-2.1
4,190,624	-				-0.7
4,190,626	-				+0.1
4,190,626	-				+0.1
4,190,626	-				+1.5
4,190,626	-				+0.8
4,190,626	-				-3.5
4,190,711	+				+0.8
4,190,711	+				+0.7
4,190,711	+				+0.2
4,190,711	+				+1.7
4,190,711	+				+1.1
4,190,712	-				+1.3
4,190,712	-				-0.4
4,190,712	-				-0.5
4,190,712	-				-1.4
4,190,712	-				+0.4
4,190,712	-				+0.9
4,190,724	+				+0.3
4,190,972	+		PfGW456L13_3725	0.17	-1.0
4,190,972	+		PfGW456L13_3725	0.17	+0.8
4,190,973	-		PfGW456L13_3725	0.17	+1.1
4,191,128	+		PfGW456L13_3725	0.26	-0.8
4,191,129	-		PfGW456L13_3725	0.26	+1.2
4,191,281	+		PfGW456L13_3725	0.35	+0.0
4,191,281	+				+0.1
4,191,281	+		PfGW456L13_3725	0.35	-2.3
4,191,281	+		PfGW456L13_3725	0.35	+0.5
4,191,281	+		PfGW456L13_3725	0.35	+1.1
4,191,282	-		PfGW456L13_3725	0.36	+0.7
4,191,282	-		PfGW456L13_3725	0.36	+1.0
4,191,282	-		PfGW456L13_3725	0.36	-0.2
4,191,282	-		PfGW456L13_3725	0.36	-0.7
4,191,282	-		PfGW456L13_3725	0.36	-0.1
4,191,282	-		PfGW456L13_3725	0.36	-0.1
4,191,282	-		PfGW456L13_3725	0.36	+0.5
4,191,282	-		PfGW456L13_3725	0.36	+0.3
4,191,282	-		PfGW456L13_3725	0.36	+0.7
4,191,620	-		PfGW456L13_3725	0.56	+1.1
4,191,623	+		PfGW456L13_3725	0.56	+0.7
4,191,623	+		PfGW456L13_3725	0.56	-2.3
4,191,623	+		PfGW456L13_3725	0.56	-2.5
4,191,623	+		PfGW456L13_3725	0.56	+0.8
4,191,623	+		PfGW456L13_3725	0.56	+0.1
4,191,623	+		PfGW456L13_3725	0.56	-0.2
4,191,623	+		PfGW456L13_3725	0.56	-0.4
4,191,624	-		PfGW456L13_3725	0.56	+0.8
4,191,624	-		PfGW456L13_3725	0.56	-2.1
4,191,624	-		PfGW456L13_3725	0.56	-0.2
4,191,624	-		PfGW456L13_3725	0.56	-2.4
4,191,624	-		PfGW456L13_3725	0.56	-0.2
4,191,624	-		PfGW456L13_3725	0.56	-1.5
4,191,624	-		PfGW456L13_3725	0.56	-0.7
4,191,914	+		PfGW456L13_3725	0.73	+0.5
4,191,914	+		PfGW456L13_3725	0.73	+0.1
4,191,914	+		PfGW456L13_3725	0.73	+0.2
4,191,915	-		PfGW456L13_3725	0.73	-1.4
4,192,287	-				+1.6
4,192,310	+				-0.0
4,192,310	+				-0.8
4,192,311	-				+0.4
4,192,311	-				+0.9
4,192,311	-				+0.6
4,192,311	-				-2.4
4,192,311	-				+1.6
4,192,355	-				-2.3
4,192,358	+				+0.3
4,192,358	+				+0.0
4,192,358	+				+0.6
4,192,358	+				-0.9
4,192,358	+				-0.1
4,192,358	+				+0.5
4,192,358	+				+0.2
4,192,358	+				+0.2
4,192,358	+				-0.2
4,192,359	-				+0.2
4,192,359	-				-0.2
4,192,359	-				-2.3
4,192,359	-				-0.9
4,192,359	-				+0.8
4,192,359	-				-0.7
4,192,359	-				-1.0
4,192,364	+				-1.3
4,192,495	+				-0.4
4,192,495	+				+0.5
4,192,496	-				+0.1
4,192,748	+		PfGW456L13_3726	0.29	+1.7
4,192,749	-		PfGW456L13_3726	0.29	-0.0
4,192,863	-		PfGW456L13_3726	0.47	-3.1
4,192,863	-		PfGW456L13_3726	0.47	-0.3
4,192,873	+		PfGW456L13_3726	0.48	+1.4
4,192,873	+				-0.3
4,192,874	-		PfGW456L13_3726	0.49	-0.9
4,192,874	-		PfGW456L13_3726	0.49	-0.3
4,192,874	-		PfGW456L13_3726	0.49	+0.4
4,192,874	-		PfGW456L13_3726	0.49	+0.7
4,192,886	+		PfGW456L13_3726	0.50	+0.4
4,192,955	+		PfGW456L13_3726	0.61	+0.6
4,192,970	+		PfGW456L13_3726	0.63	-1.7
4,192,970	+		PfGW456L13_3726	0.63	+0.0
4,192,970	+		PfGW456L13_3726	0.63	-2.5
4,192,970	+		PfGW456L13_3726	0.63	-2.3
4,192,971	-		PfGW456L13_3726	0.63	+0.9
4,192,971	-		PfGW456L13_3726	0.63	-0.1
4,192,976	+		PfGW456L13_3726	0.64	-0.2
4,192,976	+		PfGW456L13_3726	0.64	-0.9
4,192,977	-		PfGW456L13_3726	0.64	-0.9
4,192,977	-		PfGW456L13_3726	0.64	+1.2
4,192,977	-		PfGW456L13_3726	0.64	-0.5
4,193,216	+				-0.6
4,193,345	+				+0.9
4,193,345	+				-1.5