Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3323 and PfGW456L13_3324 are separated by 491 nucleotides PfGW456L13_3324 and PfGW456L13_3325 are separated by 424 nucleotides
PfGW456L13_3323 - FIG002465: BNR repeat protein, at 3,734,146 to 3,735,183
_3323
PfGW456L13_3324 - FIG00461010: hypothetical protein, at 3,735,675 to 3,736,007
_3324
PfGW456L13_3325 - Membrane alanine aminopeptidase N (EC 3.4.11.2), at 3,736,432 to 3,739,089
_3325
Position (kb)
3735
3736
3737 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3734.951 kb on + strand, within PfGW456L13_3323 at 3734.952 kb on - strand, within PfGW456L13_3323 at 3735.050 kb on + strand, within PfGW456L13_3323 at 3735.050 kb on + strand, within PfGW456L13_3323 at 3735.051 kb on - strand, within PfGW456L13_3323 at 3735.171 kb on + strand at 3735.171 kb on + strand at 3735.198 kb on + strand at 3735.199 kb on - strand at 3735.199 kb on - strand at 3735.213 kb on + strand at 3735.213 kb on + strand at 3735.213 kb on + strand at 3735.214 kb on - strand at 3735.216 kb on + strand at 3735.216 kb on + strand at 3735.216 kb on + strand at 3735.216 kb on + strand at 3735.216 kb on + strand at 3735.217 kb on - strand at 3735.217 kb on - strand at 3735.217 kb on - strand at 3735.217 kb on - strand at 3735.222 kb on + strand at 3735.222 kb on + strand at 3735.222 kb on + strand at 3735.223 kb on - strand at 3735.284 kb on + strand at 3735.284 kb on + strand at 3735.284 kb on + strand at 3735.284 kb on + strand at 3735.285 kb on - strand at 3735.285 kb on - strand at 3735.285 kb on - strand at 3735.285 kb on - strand at 3735.285 kb on - strand at 3735.285 kb on - strand at 3735.370 kb on + strand at 3735.418 kb on + strand at 3735.425 kb on + strand at 3735.426 kb on - strand at 3735.426 kb on - strand at 3735.454 kb on + strand at 3735.473 kb on + strand at 3735.473 kb on + strand at 3735.473 kb on + strand at 3735.473 kb on + strand at 3735.474 kb on - strand at 3735.474 kb on - strand at 3735.474 kb on - strand at 3735.474 kb on - strand at 3735.474 kb on - strand at 3735.474 kb on - strand at 3735.474 kb on - strand at 3735.474 kb on - strand at 3735.478 kb on - strand at 3735.478 kb on - strand at 3735.516 kb on + strand at 3735.516 kb on + strand at 3735.516 kb on + strand at 3735.517 kb on - strand at 3735.517 kb on - strand at 3735.517 kb on - strand at 3735.517 kb on - strand at 3735.517 kb on - strand at 3735.517 kb on - strand at 3735.520 kb on + strand at 3735.521 kb on - strand at 3735.560 kb on + strand at 3735.759 kb on + strand, within PfGW456L13_3324 at 3735.759 kb on + strand, within PfGW456L13_3324 at 3735.759 kb on + strand, within PfGW456L13_3324 at 3735.759 kb on + strand, within PfGW456L13_3324 at 3735.760 kb on - strand, within PfGW456L13_3324 at 3735.760 kb on - strand, within PfGW456L13_3324 at 3735.760 kb on - strand, within PfGW456L13_3324 at 3735.924 kb on + strand, within PfGW456L13_3324 at 3735.925 kb on - strand, within PfGW456L13_3324 at 3735.925 kb on - strand, within PfGW456L13_3324 at 3735.958 kb on + strand, within PfGW456L13_3324 at 3735.958 kb on + strand, within PfGW456L13_3324 at 3736.272 kb on + strand at 3736.272 kb on + strand at 3736.276 kb on + strand at 3736.371 kb on + strand at 3736.375 kb on + strand at 3736.375 kb on + strand at 3736.375 kb on + strand at 3736.375 kb on + strand at 3736.375 kb on + strand at 3736.375 kb on + strand at 3736.375 kb on + strand at 3736.375 kb on + strand at 3736.538 kb on + strand at 3736.538 kb on + strand at 3736.539 kb on - strand at 3736.539 kb on - strand at 3736.988 kb on + strand, within PfGW456L13_3325
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 3,734,951 + PfGW456L13_3323 0.78 -1.9 3,734,952 - PfGW456L13_3323 0.78 +0.5 3,735,050 + PfGW456L13_3323 0.87 +1.4 3,735,050 + PfGW456L13_3323 0.87 -0.1 3,735,051 - PfGW456L13_3323 0.87 +0.1 3,735,171 + +1.2 3,735,171 + -2.4 3,735,198 + -0.7 3,735,199 - +0.4 3,735,199 - -1.7 3,735,213 + -1.5 3,735,213 + -0.6 3,735,213 + -2.2 3,735,214 - -0.4 3,735,216 + +0.2 3,735,216 + -0.2 3,735,216 + +1.0 3,735,216 + -0.9 3,735,216 + -1.8 3,735,217 - +0.5 3,735,217 - +2.6 3,735,217 - +0.2 3,735,217 - +1.1 3,735,222 + +1.0 3,735,222 + -1.8 3,735,222 + +0.9 3,735,223 - +0.2 3,735,284 + +0.9 3,735,284 + +0.6 3,735,284 + +0.1 3,735,284 + -0.2 3,735,285 - -1.5 3,735,285 - -0.3 3,735,285 - -2.2 3,735,285 - -0.1 3,735,285 - -0.8 3,735,285 - +0.2 3,735,370 + +0.8 3,735,418 + -0.1 3,735,425 + -0.1 3,735,426 - -1.7 3,735,426 - +0.9 3,735,454 + -2.2 3,735,473 + -0.9 3,735,473 + +1.5 3,735,473 + +0.1 3,735,473 + -0.1 3,735,474 - -2.2 3,735,474 - +0.4 3,735,474 - +0.0 3,735,474 - -2.2 3,735,474 - -0.8 3,735,474 - +1.1 3,735,474 - -0.6 3,735,474 - -1.1 3,735,478 - +0.8 3,735,478 - -0.5 3,735,516 + -1.7 3,735,516 + +1.5 3,735,516 + -0.4 3,735,517 - -0.9 3,735,517 - -0.5 3,735,517 - +0.3 3,735,517 - -0.4 3,735,517 - +0.6 3,735,517 - +1.6 3,735,520 + +0.4 3,735,521 - -0.5 3,735,560 + -1.9 3,735,759 + PfGW456L13_3324 0.25 -1.6 3,735,759 + PfGW456L13_3324 0.25 -0.8 3,735,759 + PfGW456L13_3324 0.25 -0.1 3,735,759 + PfGW456L13_3324 0.25 +1.0 3,735,760 - PfGW456L13_3324 0.26 +1.1 3,735,760 - PfGW456L13_3324 0.26 +0.6 3,735,760 - PfGW456L13_3324 0.26 -1.8 3,735,924 + PfGW456L13_3324 0.75 +0.6 3,735,925 - PfGW456L13_3324 0.75 +0.9 3,735,925 - PfGW456L13_3324 0.75 +0.6 3,735,958 + PfGW456L13_3324 0.85 +0.9 3,735,958 + PfGW456L13_3324 0.85 +0.0 3,736,272 + -0.1 3,736,272 + +2.0 3,736,276 + -0.4 3,736,371 + +1.0 3,736,375 + +0.7 3,736,375 + -1.8 3,736,375 + +1.0 3,736,375 + -1.5 3,736,375 + -2.2 3,736,375 + +0.1 3,736,375 + +0.9 3,736,375 + +1.1 3,736,538 + +0.4 3,736,538 + +1.2 3,736,539 - -0.1 3,736,539 - -0.6 3,736,988 + PfGW456L13_3325 0.21 -0.8
Or see this region's nucleotide sequence