Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2637 and PfGW456L13_2638 are separated by 124 nucleotides PfGW456L13_2638 and PfGW456L13_2639 overlap by 4 nucleotides
PfGW456L13_2637 - Adenylosuccinate lyase (EC 4.3.2.2), at 2,937,476 to 2,938,846
_2637
PfGW456L13_2638 - FIG002903: a protein of unknown function perhaps involved in purine metabolism, at 2,938,971 to 2,939,594
_2638
PfGW456L13_2639 - tRNA-specific 2-thiouridylase MnmA, at 2,939,591 to 2,940,724
_2639
Position (kb)
2938
2939
2940 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2938.932 kb on + strand at 2938.932 kb on + strand at 2938.932 kb on + strand at 2938.936 kb on - strand at 2938.942 kb on - strand at 2939.188 kb on + strand, within PfGW456L13_2638 at 2939.434 kb on + strand, within PfGW456L13_2638 at 2939.434 kb on + strand, within PfGW456L13_2638 at 2939.434 kb on + strand, within PfGW456L13_2638 at 2939.434 kb on + strand at 2939.434 kb on + strand, within PfGW456L13_2638 at 2939.434 kb on + strand, within PfGW456L13_2638 at 2939.435 kb on - strand, within PfGW456L13_2638 at 2939.435 kb on - strand, within PfGW456L13_2638 at 2939.435 kb on - strand, within PfGW456L13_2638 at 2939.435 kb on - strand, within PfGW456L13_2638 at 2939.594 kb on + strand at 2939.595 kb on - strand at 2939.595 kb on - strand at 2939.595 kb on - strand at 2939.627 kb on + strand at 2939.628 kb on - strand at 2939.628 kb on - strand at 2939.628 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 2,938,932 + +2.8 2,938,932 + +2.2 2,938,932 + +2.5 2,938,936 - +2.0 2,938,942 - +1.3 2,939,188 + PfGW456L13_2638 0.35 +1.2 2,939,434 + PfGW456L13_2638 0.74 -0.0 2,939,434 + PfGW456L13_2638 0.74 +0.2 2,939,434 + PfGW456L13_2638 0.74 -0.2 2,939,434 + +0.1 2,939,434 + PfGW456L13_2638 0.74 -0.3 2,939,434 + PfGW456L13_2638 0.74 +1.2 2,939,435 - PfGW456L13_2638 0.74 +1.7 2,939,435 - PfGW456L13_2638 0.74 +1.3 2,939,435 - PfGW456L13_2638 0.74 -2.0 2,939,435 - PfGW456L13_2638 0.74 +1.6 2,939,594 + +0.5 2,939,595 - +4.1 2,939,595 - -2.2 2,939,595 - +0.1 2,939,627 + +0.8 2,939,628 - +1.9 2,939,628 - +1.8 2,939,628 - +1.3
Or see this region's nucleotide sequence