Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_246

Experiment: L-Tryptophan (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPfGW456L13_245 and PfGW456L13_246 overlap by 4 nucleotidesPfGW456L13_246 and PfGW456L13_247 overlap by 14 nucleotides PfGW456L13_245 - FIG021862: membrane protein, exporter, at 288,357 to 290,696 _245 PfGW456L13_246 - FIG064705: cation/hydrogen antiporter, at 290,693 to 291,853 _246 PfGW456L13_247 - FIG022199: FAD-binding protein, at 291,840 to 293,087 _247 Position (kb) 290 291 292Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 289.893 kb on + strand, within PfGW456L13_245at 289.894 kb on - strand, within PfGW456L13_245at 290.350 kb on + strand, within PfGW456L13_245at 290.402 kb on - strand, within PfGW456L13_245at 290.825 kb on + strand, within PfGW456L13_246at 290.825 kb on + strand, within PfGW456L13_246at 290.825 kb on + strand, within PfGW456L13_246at 290.826 kb on - strand, within PfGW456L13_246at 290.826 kb on - strand, within PfGW456L13_246at 290.826 kb on - strand, within PfGW456L13_246at 290.897 kb on + strand, within PfGW456L13_246at 290.897 kb on + strand, within PfGW456L13_246at 290.898 kb on - strand, within PfGW456L13_246at 290.898 kb on - strand, within PfGW456L13_246at 290.927 kb on + strand, within PfGW456L13_246at 290.928 kb on - strand, within PfGW456L13_246at 291.110 kb on + strand, within PfGW456L13_246at 291.110 kb on + strand, within PfGW456L13_246at 291.110 kb on + strand, within PfGW456L13_246at 291.110 kb on + strand, within PfGW456L13_246at 291.110 kb on + strand, within PfGW456L13_246at 291.110 kb on + strand, within PfGW456L13_246at 291.110 kb on + strand, within PfGW456L13_246at 291.111 kb on - strand, within PfGW456L13_246at 291.111 kb on - strand, within PfGW456L13_246at 291.111 kb on - strand, within PfGW456L13_246at 291.111 kb on - strand, within PfGW456L13_246at 291.111 kb on - strand, within PfGW456L13_246at 291.111 kb on - strand, within PfGW456L13_246at 291.111 kb on - strand, within PfGW456L13_246at 291.111 kb on - strand, within PfGW456L13_246at 291.111 kb on - strand, within PfGW456L13_246at 291.111 kb on - strand, within PfGW456L13_246at 291.311 kb on + strand, within PfGW456L13_246at 291.312 kb on - strand, within PfGW456L13_246at 291.386 kb on + strand, within PfGW456L13_246at 291.387 kb on - strand, within PfGW456L13_246at 291.387 kb on - strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.465 kb on - strand, within PfGW456L13_246at 291.465 kb on - strand, within PfGW456L13_246at 291.465 kb on - strand, within PfGW456L13_246at 291.465 kb on - strand, within PfGW456L13_246at 291.465 kb on - strand, within PfGW456L13_246at 291.465 kb on - strand, within PfGW456L13_246at 291.465 kb on - strand, within PfGW456L13_246at 291.465 kb on - strand, within PfGW456L13_246at 291.465 kb on - strand, within PfGW456L13_246at 291.465 kb on - strand, within PfGW456L13_246at 291.737 kb on + strand, within PfGW456L13_246at 291.737 kb on + strand, within PfGW456L13_246at 291.738 kb on - strandat 291.769 kb on + strandat 291.770 kb on - strandat 291.802 kb on + strandat 292.099 kb on - strand, within PfGW456L13_247at 292.810 kb on + strand, within PfGW456L13_247

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Tryptophan (C)
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289,893 + PfGW456L13_245 0.66 +1.1
289,894 - PfGW456L13_245 0.66 +0.6
290,350 + PfGW456L13_245 0.85 +0.1
290,402 - PfGW456L13_245 0.87 -1.8
290,825 + PfGW456L13_246 0.11 +0.3
290,825 + PfGW456L13_246 0.11 -0.8
290,825 + PfGW456L13_246 0.11 +0.2
290,826 - PfGW456L13_246 0.11 -1.4
290,826 - PfGW456L13_246 0.11 -0.6
290,826 - PfGW456L13_246 0.11 -2.9
290,897 + PfGW456L13_246 0.18 -0.8
290,897 + PfGW456L13_246 0.18 -0.9
290,898 - PfGW456L13_246 0.18 -0.6
290,898 - PfGW456L13_246 0.18 +0.9
290,927 + PfGW456L13_246 0.20 -0.2
290,928 - PfGW456L13_246 0.20 -0.8
291,110 + PfGW456L13_246 0.36 +0.1
291,110 + PfGW456L13_246 0.36 -1.0
291,110 + PfGW456L13_246 0.36 -0.5
291,110 + PfGW456L13_246 0.36 -0.4
291,110 + PfGW456L13_246 0.36 +1.3
291,110 + PfGW456L13_246 0.36 -1.7
291,110 + PfGW456L13_246 0.36 +0.7
291,111 - PfGW456L13_246 0.36 +0.4
291,111 - PfGW456L13_246 0.36 -0.7
291,111 - PfGW456L13_246 0.36 +0.2
291,111 - PfGW456L13_246 0.36 +1.4
291,111 - PfGW456L13_246 0.36 +1.0
291,111 - PfGW456L13_246 0.36 +0.5
291,111 - PfGW456L13_246 0.36 +0.3
291,111 - PfGW456L13_246 0.36 +0.5
291,111 - PfGW456L13_246 0.36 -1.3
291,111 - PfGW456L13_246 0.36 -1.5
291,311 + PfGW456L13_246 0.53 -0.9
291,312 - PfGW456L13_246 0.53 +0.5
291,386 + PfGW456L13_246 0.60 +1.2
291,387 - PfGW456L13_246 0.60 -0.1
291,387 - PfGW456L13_246 0.60 +1.0
291,390 + PfGW456L13_246 0.60 -0.0
291,390 + PfGW456L13_246 0.60 +0.4
291,390 + PfGW456L13_246 0.60 +0.1
291,390 + PfGW456L13_246 0.60 -2.8
291,390 + PfGW456L13_246 0.60 -0.8
291,390 + PfGW456L13_246 0.60 -2.0
291,390 + PfGW456L13_246 0.60 -1.7
291,390 + PfGW456L13_246 0.60 -0.9
291,390 + PfGW456L13_246 0.60 +0.8
291,390 + PfGW456L13_246 0.60 +0.9
291,390 + PfGW456L13_246 0.60 +0.5
291,391 - PfGW456L13_246 0.60 -0.4
291,391 - PfGW456L13_246 0.60 -1.7
291,391 - PfGW456L13_246 0.60 -2.6
291,391 - PfGW456L13_246 0.60 +0.6
291,391 - PfGW456L13_246 0.60 -0.1
291,391 - PfGW456L13_246 0.60 +1.6
291,391 - PfGW456L13_246 0.60 -0.7
291,391 - PfGW456L13_246 0.60 -2.4
291,391 - PfGW456L13_246 0.60 -0.2
291,391 - PfGW456L13_246 0.60 -0.9
291,391 - PfGW456L13_246 0.60 +0.2
291,391 - PfGW456L13_246 0.60 +1.8
291,391 - PfGW456L13_246 0.60 -1.1
291,391 - PfGW456L13_246 0.60 +0.5
291,391 - PfGW456L13_246 0.60 +1.2
291,391 - PfGW456L13_246 0.60 +0.3
291,391 - PfGW456L13_246 0.60 -0.1
291,391 - PfGW456L13_246 0.60 -2.0
291,391 - PfGW456L13_246 0.60 +1.9
291,464 + PfGW456L13_246 0.66 +0.0
291,464 + PfGW456L13_246 0.66 +0.4
291,464 + PfGW456L13_246 0.66 +1.6
291,464 + PfGW456L13_246 0.66 +0.8
291,464 + PfGW456L13_246 0.66 -0.1
291,464 + PfGW456L13_246 0.66 -2.0
291,464 + PfGW456L13_246 0.66 -0.6
291,464 + PfGW456L13_246 0.66 -0.2
291,464 + PfGW456L13_246 0.66 -0.3
291,464 + PfGW456L13_246 0.66 -0.3
291,464 + PfGW456L13_246 0.66 -0.3
291,464 + PfGW456L13_246 0.66 -1.3
291,465 - PfGW456L13_246 0.66 -1.4
291,465 - PfGW456L13_246 0.66 +0.8
291,465 - PfGW456L13_246 0.66 -3.5
291,465 - PfGW456L13_246 0.66 -0.6
291,465 - PfGW456L13_246 0.66 -0.7
291,465 - PfGW456L13_246 0.66 +1.2
291,465 - PfGW456L13_246 0.66 +1.5
291,465 - PfGW456L13_246 0.66 +1.2
291,465 - PfGW456L13_246 0.66 +0.7
291,465 - PfGW456L13_246 0.66 -1.0
291,737 + PfGW456L13_246 0.90 +1.7
291,737 + PfGW456L13_246 0.90 -0.4
291,738 - +0.2
291,769 + +0.3
291,770 - +0.6
291,802 + -0.5
292,099 - PfGW456L13_247 0.21 +0.9
292,810 + PfGW456L13_247 0.78 +0.1

Or see this region's nucleotide sequence