Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1966

Experiment: L-Tryptophan (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Tryptophan (C)
2,164,441	+		PfGW456L13_1964	0.81	-0.1
2,164,441	+		PfGW456L13_1964	0.81	+2.1
2,164,441	+		PfGW456L13_1964	0.81	+2.0
2,164,441	+		PfGW456L13_1964	0.81	+2.0
2,164,442	-		PfGW456L13_1964	0.81	+2.3
2,164,442	-		PfGW456L13_1964	0.81	+2.5
2,164,442	-		PfGW456L13_1964	0.81	+2.6
2,164,442	-		PfGW456L13_1964	0.81	+2.1
2,164,457	+		PfGW456L13_1964	0.83	+2.4
2,164,457	+		PfGW456L13_1964	0.83	+2.1
2,164,457	+		PfGW456L13_1964	0.83	+2.2
2,164,458	-		PfGW456L13_1964	0.83	+2.4
2,164,458	-		PfGW456L13_1964	0.83	+1.9
2,164,458	-		PfGW456L13_1964	0.83	+2.2
2,164,461	+		PfGW456L13_1964	0.83	+1.7
2,164,518	-				+3.2
2,164,518	-				+0.8
2,164,518	-				+5.1
2,164,540	+				+1.6
2,164,540	+				+1.9
2,164,541	-				+2.6
2,164,541	-				+2.0
2,164,541	-				+2.2
2,164,541	-				+2.4
2,164,541	-				+1.4
2,164,561	+				+1.9
2,164,561	+				+1.2
2,164,561	+				+0.6
2,164,561	+				+1.4
2,164,561	+				+2.0
2,164,562	-				+2.5
2,164,562	-				+2.2
2,164,562	-				+1.7
2,164,562	-				+2.6
2,164,562	-				+2.3
2,164,562	-				+2.9
2,164,575	+				+2.0
2,164,579	+				-1.0
2,164,579	+				-1.6
2,164,579	+				+0.9
2,164,579	+				-1.4
2,164,580	-				+3.0
2,164,580	-				+2.1
2,164,580	-				+2.3
2,164,580	-				+3.1
2,164,580	-				+2.6
2,164,580	-				+2.2
2,164,580	-				+2.0
2,164,580	-				+2.3
2,164,580	-				+2.4
2,164,580	-				+1.2
2,164,588	+				-2.8
2,164,588	+				+0.6
2,164,588	+				-2.0
2,164,589	-				+2.4
2,164,589	-				+2.4
2,164,589	-				+2.2
2,164,589	-				+3.5
2,164,589	-				+3.1
2,164,589	-				+2.3
2,164,589	-				+2.4
2,164,835	+		PfGW456L13_1965	0.22	+2.6
2,164,836	-		PfGW456L13_1965	0.22	+3.3
2,164,836	-				+1.7
2,164,855	+		PfGW456L13_1965	0.25	+2.3
2,164,943	+		PfGW456L13_1965	0.38	+2.1
2,164,943	+		PfGW456L13_1965	0.38	+1.6
2,164,944	-		PfGW456L13_1965	0.38	+1.9
2,164,944	-		PfGW456L13_1965	0.38	+1.7
2,164,944	-		PfGW456L13_1965	0.38	+2.2
2,165,003	+		PfGW456L13_1965	0.47	+0.9
2,165,003	+		PfGW456L13_1965	0.47	+1.4
2,165,003	+		PfGW456L13_1965	0.47	+2.2
2,165,003	+		PfGW456L13_1965	0.47	+1.3
2,165,003	+		PfGW456L13_1965	0.47	+2.3
2,165,003	+		PfGW456L13_1965	0.47	+1.9
2,165,003	+		PfGW456L13_1965	0.47	+2.5
2,165,004	-		PfGW456L13_1965	0.47	+2.1
2,165,004	-		PfGW456L13_1965	0.47	+2.7
2,165,004	-		PfGW456L13_1965	0.47	+2.2
2,165,004	-		PfGW456L13_1965	0.47	+2.2
2,165,004	-		PfGW456L13_1965	0.47	+2.2
2,165,072	+		PfGW456L13_1965	0.57	+2.4
2,165,163	+		PfGW456L13_1965	0.70	+2.1
2,165,177	-		PfGW456L13_1965	0.72	+2.4
2,165,285	+		PfGW456L13_1965	0.87	+0.6
2,165,285	+		PfGW456L13_1965	0.87	+2.1
2,165,285	+		PfGW456L13_1965	0.87	+1.4
2,165,286	-		PfGW456L13_1965	0.88	+2.2
2,165,286	-		PfGW456L13_1965	0.88	+2.0
2,165,286	-		PfGW456L13_1965	0.88	+2.4
2,165,340	-				+2.8
2,165,367	+				+2.1
2,165,367	+				+2.2
2,165,367	+				+1.6
2,165,367	+				+2.1
2,165,367	+				+1.4
2,165,367	+				+1.9
2,165,368	-				+2.4
2,165,368	-				+1.9
2,165,368	-				+2.7
2,165,368	-				+2.1
2,165,368	-				+3.2
2,165,368	-				+3.1
2,165,368	-				+2.1
2,165,368	-				+2.5
2,165,368	-				+2.5
2,165,368	-				+1.7
2,165,368	-				+1.7
2,165,368	-				+2.3
2,165,380	+				+0.8
2,165,380	+				+1.8
2,165,380	+				+2.6
2,165,381	-				+2.4
2,165,381	-				+2.3
2,165,410	+				+2.2
2,165,410	+				+1.9
2,165,411	-				+2.2
2,165,540	-		PfGW456L13_1966	0.25	+1.7
2,165,540	-		PfGW456L13_1966	0.25	+2.0
2,165,540	-		PfGW456L13_1966	0.25	+1.8
2,165,540	-		PfGW456L13_1966	0.25	+2.6
2,165,540	-		PfGW456L13_1966	0.25	+2.1
2,165,545	+		PfGW456L13_1966	0.25	+1.6
2,165,545	+		PfGW456L13_1966	0.25	+2.1
2,165,545	+		PfGW456L13_1966	0.25	+1.7
2,165,545	+		PfGW456L13_1966	0.25	+0.9
2,165,545	+		PfGW456L13_1966	0.25	+1.2
2,165,545	+		PfGW456L13_1966	0.25	+2.3
2,165,545	+		PfGW456L13_1966	0.25	+1.7
2,165,545	+		PfGW456L13_1966	0.25	+1.6
2,165,545	+		PfGW456L13_1966	0.25	+2.1
2,165,546	-		PfGW456L13_1966	0.25	+1.9
2,165,546	-		PfGW456L13_1966	0.25	+2.4
2,165,546	-		PfGW456L13_1966	0.25	+2.5
2,165,546	-		PfGW456L13_1966	0.25	+1.5
2,165,546	-		PfGW456L13_1966	0.25	+2.8
2,165,546	-		PfGW456L13_1966	0.25	+2.5
2,165,546	-		PfGW456L13_1966	0.25	+2.3
2,165,546	-		PfGW456L13_1966	0.25	+2.2
2,165,546	-		PfGW456L13_1966	0.25	+1.7
2,165,546	-		PfGW456L13_1966	0.25	+2.3
2,165,591	-		PfGW456L13_1966	0.32	+2.1
2,165,591	-		PfGW456L13_1966	0.32	+2.4
2,165,591	-		PfGW456L13_1966	0.32	+3.7
2,165,593	+		PfGW456L13_1966	0.32	+2.1
2,165,593	+		PfGW456L13_1966	0.32	+2.6
2,165,593	+		PfGW456L13_1966	0.32	+1.9
2,165,593	+		PfGW456L13_1966	0.32	+1.4
2,165,593	+		PfGW456L13_1966	0.32	+2.8
2,165,791	+		PfGW456L13_1966	0.61	+2.4
2,165,791	+		PfGW456L13_1966	0.61	+1.5
2,165,791	+		PfGW456L13_1966	0.61	+1.5
2,165,791	+		PfGW456L13_1966	0.61	+1.2
2,165,791	+		PfGW456L13_1966	0.61	+1.6
2,165,791	+		PfGW456L13_1966	0.61	+3.2
2,165,791	+		PfGW456L13_1966	0.61	+2.2
2,165,792	-		PfGW456L13_1966	0.61	+2.2
2,165,792	-		PfGW456L13_1966	0.61	+2.0
2,165,839	+		PfGW456L13_1966	0.67	+0.7
2,165,839	+		PfGW456L13_1966	0.67	+2.0
2,165,941	+		PfGW456L13_1966	0.82	+1.0
2,165,941	+		PfGW456L13_1966	0.82	+1.3
2,165,942	-		PfGW456L13_1966	0.82	+3.3
2,165,942	-		PfGW456L13_1966	0.82	+2.5
2,165,942	-		PfGW456L13_1966	0.82	+1.3
2,165,942	-		PfGW456L13_1966	0.82	+1.8
2,165,942	-		PfGW456L13_1966	0.82	+1.2
2,165,942	-		PfGW456L13_1966	0.82	+2.9
2,165,942	-		PfGW456L13_1966	0.82	+2.4
2,165,959	+		PfGW456L13_1966	0.85	+2.0
2,165,959	+		PfGW456L13_1966	0.85	+1.6
2,165,959	+		PfGW456L13_1966	0.85	+0.7
2,165,959	+		PfGW456L13_1966	0.85	+2.4
2,165,960	-		PfGW456L13_1966	0.85	+2.5
2,165,960	-		PfGW456L13_1966	0.85	+2.1
2,165,960	-		PfGW456L13_1966	0.85	+2.6
2,165,960	-		PfGW456L13_1966	0.85	+2.5
2,165,960	-		PfGW456L13_1966	0.85	+2.1
2,165,960	-		PfGW456L13_1966	0.85	+2.8
2,165,960	-		PfGW456L13_1966	0.85	+2.0
2,165,960	-		PfGW456L13_1966	0.85	+1.8
2,165,980	+		PfGW456L13_1966	0.88	+2.5
2,165,980	+		PfGW456L13_1966	0.88	+1.3
2,165,981	-		PfGW456L13_1966	0.88	+3.0
2,165,981	-		PfGW456L13_1966	0.88	+3.7
2,165,981	-		PfGW456L13_1966	0.88	+2.4
2,165,981	-		PfGW456L13_1966	0.88	+2.5
2,165,981	-		PfGW456L13_1966	0.88	+2.1
2,165,981	-		PfGW456L13_1966	0.88	+2.7
2,166,043	+				+1.9
2,166,044	-				+2.1
2,166,067	+				-1.4
2,166,068	-				+1.9
2,166,106	+				+2.3
2,166,106	+				+2.7
2,166,106	+				+2.5
2,166,106	+				+1.6
2,166,106	+				+2.6
2,166,107	-				+2.9
2,166,107	-				+3.2
2,166,132	+				+1.2
2,166,133	-				+2.4
2,166,139	+				+2.0
2,166,139	+				+3.0
2,166,231	+		PfGW456L13_1967	0.17	+2.0
2,166,232	-		PfGW456L13_1967	0.17	+1.8
2,166,232	-		PfGW456L13_1967	0.17	+3.2
2,166,500	-		PfGW456L13_1967	0.52	+2.0
2,166,500	-		PfGW456L13_1967	0.52	+2.1
2,166,500	-		PfGW456L13_1967	0.52	+0.9
2,166,539	-		PfGW456L13_1967	0.57	+3.4
2,166,865	+				-0.6
2,166,865	+				-1.3
2,166,866	-				+2.4
2,166,866	-				+3.0
2,166,866	-				+1.2
2,166,866	-				+2.8
2,166,891	-				+3.0
2,166,923	+				+1.0
2,166,923	+				-2.2
2,166,924	-				+2.7
2,166,924	-				+3.9
2,166,924	-				+2.6
2,166,951	+				+1.2
2,166,951	+				-1.2
2,166,951	+				-3.9
2,166,951	+				-2.1
2,166,951	+				-1.8
2,166,951	+				-1.7
2,166,951	+				-1.0
2,166,951	+				-1.4
2,166,951	+				-2.0
2,166,951	+				-2.4
2,166,952	-				+2.0
2,166,952	-				+2.2
2,166,952	-				+2.1
2,166,952	-				+2.8
2,166,952	-				+2.2
2,166,952	-				+2.7
2,166,952	-				+1.2
2,166,952	-				+2.8
2,166,952	-				+2.2
2,166,952	-				+2.5
2,167,022	+				+2.0
2,167,022	+				+3.1
2,167,022	+				+2.3
2,167,022	+				+2.7
2,167,023	-				+2.4
2,167,023	-				+2.5