Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1874

Experiment: L-Tryptophan (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Tryptophan (C)
2,060,909	+		PfGW456L13_1873	0.13	+0.5
2,060,947	-		PfGW456L13_1873	0.16	-0.5
2,061,153	+		PfGW456L13_1873	0.37	-0.3
2,061,153	+		PfGW456L13_1873	0.37	-1.2
2,061,154	-		PfGW456L13_1873	0.37	+0.7
2,061,154	-		PfGW456L13_1873	0.37	+1.2
2,061,179	+		PfGW456L13_1873	0.39	+0.2
2,061,179	+		PfGW456L13_1873	0.39	+1.7
2,061,311	+		PfGW456L13_1873	0.52	+0.2
2,061,311	+		PfGW456L13_1873	0.52	+0.2
2,061,311	+		PfGW456L13_1873	0.52	+1.2
2,061,311	+		PfGW456L13_1873	0.52	+2.0
2,061,312	-		PfGW456L13_1873	0.52	+1.0
2,061,317	+		PfGW456L13_1873	0.53	-0.4
2,061,317	+		PfGW456L13_1873	0.53	-3.3
2,061,318	-		PfGW456L13_1873	0.53	+2.1
2,061,357	+		PfGW456L13_1873	0.57	+0.5
2,061,357	+		PfGW456L13_1873	0.57	+0.2
2,061,357	+		PfGW456L13_1873	0.57	+0.0
2,061,357	+		PfGW456L13_1873	0.57	+0.3
2,061,357	+		PfGW456L13_1873	0.57	-3.0
2,061,357	+		PfGW456L13_1873	0.57	-0.5
2,061,357	+		PfGW456L13_1873	0.57	-0.7
2,061,357	+		PfGW456L13_1873	0.57	-0.3
2,061,358	-		PfGW456L13_1873	0.57	+1.1
2,061,358	-		PfGW456L13_1873	0.57	-1.5
2,061,358	-		PfGW456L13_1873	0.57	+0.2
2,061,358	-		PfGW456L13_1873	0.57	-0.5
2,061,358	-		PfGW456L13_1873	0.57	+1.3
2,061,358	-		PfGW456L13_1873	0.57	+0.9
2,061,358	-		PfGW456L13_1873	0.57	-0.4
2,061,361	+		PfGW456L13_1873	0.57	+2.2
2,061,361	+		PfGW456L13_1873	0.57	+1.3
2,061,361	+		PfGW456L13_1873	0.57	+0.8
2,061,361	+		PfGW456L13_1873	0.57	+0.2
2,061,361	+		PfGW456L13_1873	0.57	+1.3
2,061,361	+		PfGW456L13_1873	0.57	-0.5
2,061,362	-		PfGW456L13_1873	0.57	-0.9
2,061,393	-		PfGW456L13_1873	0.60	+0.3
2,061,474	-		PfGW456L13_1873	0.68	+0.1
2,061,488	+		PfGW456L13_1873	0.70	+1.3
2,061,488	+		PfGW456L13_1873	0.70	+0.4
2,061,488	+		PfGW456L13_1873	0.70	-1.8
2,061,488	+		PfGW456L13_1873	0.70	+0.4
2,061,489	-		PfGW456L13_1873	0.70	+0.2
2,061,489	-		PfGW456L13_1873	0.70	-0.6
2,061,489	-		PfGW456L13_1873	0.70	-0.1
2,061,489	-		PfGW456L13_1873	0.70	+0.8
2,061,563	+		PfGW456L13_1873	0.77	-2.7
2,061,564	-		PfGW456L13_1873	0.77	+0.9
2,061,564	-		PfGW456L13_1873	0.77	+0.8
2,061,564	-		PfGW456L13_1873	0.77	+0.8
2,061,564	-		PfGW456L13_1873	0.77	-0.2
2,061,587	+		PfGW456L13_1873	0.80	+0.2
2,061,587	+		PfGW456L13_1873	0.80	+1.2
2,061,587	+		PfGW456L13_1873	0.80	-0.0
2,061,588	-		PfGW456L13_1873	0.80	+0.5
2,061,588	-		PfGW456L13_1873	0.80	-0.3
2,061,588	-		PfGW456L13_1873	0.80	-0.7
2,061,588	-		PfGW456L13_1873	0.80	-0.7
2,061,588	-		PfGW456L13_1873	0.80	-1.8
2,061,686	+		PfGW456L13_1873	0.89	+1.9
2,061,686	+		PfGW456L13_1873	0.89	+0.8
2,061,687	-		PfGW456L13_1873	0.90	-0.0
2,061,687	-		PfGW456L13_1873	0.90	-0.2
2,061,687	-		PfGW456L13_1873	0.90	+2.5
2,061,726	-				-0.8
2,061,805	-				-0.3
2,061,805	-				+0.7
2,061,805	-				-0.2
2,061,846	-				-0.2
2,061,870	+				-0.5
2,061,870	+				+0.5
2,061,870	+				+1.0
2,061,870	+				+0.4
2,061,870	+				+1.3
2,061,870	+				-0.2
2,061,871	-				-1.0
2,061,871	-				+2.0
2,061,871	-				+1.2
2,061,875	+				+1.8
2,061,875	+				+1.0
2,061,875	+				-0.2
2,061,878	+				+0.3
2,061,878	+				+0.0
2,061,879	-				+0.1
2,062,001	+		PfGW456L13_1874	0.10	-2.4
2,062,001	+		PfGW456L13_1874	0.10	-0.3
2,062,001	+		PfGW456L13_1874	0.10	-0.5
2,062,002	-		PfGW456L13_1874	0.10	+0.2
2,062,002	-		PfGW456L13_1874	0.10	-0.4
2,062,002	-		PfGW456L13_1874	0.10	-0.5
2,062,002	-		PfGW456L13_1874	0.10	+0.9
2,062,005	+		PfGW456L13_1874	0.10	+0.2
2,062,005	+		PfGW456L13_1874	0.10	+0.6
2,062,005	+		PfGW456L13_1874	0.10	-0.3
2,062,006	-				-2.4
2,062,006	-		PfGW456L13_1874	0.11	-1.3
2,062,006	-		PfGW456L13_1874	0.11	+0.3
2,062,006	-		PfGW456L13_1874	0.11	-3.3
2,062,017	-		PfGW456L13_1874	0.11	-0.9
2,062,048	+		PfGW456L13_1874	0.14	+1.2
2,062,048	+		PfGW456L13_1874	0.14	-4.0
2,062,048	+		PfGW456L13_1874	0.14	+0.7
2,062,049	-		PfGW456L13_1874	0.14	-0.6
2,062,049	-		PfGW456L13_1874	0.14	+0.3
2,062,049	-		PfGW456L13_1874	0.14	-0.5
2,062,049	-		PfGW456L13_1874	0.14	+1.5
2,062,049	-		PfGW456L13_1874	0.14	-0.8
2,062,049	-		PfGW456L13_1874	0.14	+0.7
2,062,049	-		PfGW456L13_1874	0.14	+1.1
2,062,049	-		PfGW456L13_1874	0.14	-1.3
2,062,544	+		PfGW456L13_1874	0.53	+2.2
2,062,545	-		PfGW456L13_1874	0.53	-0.3
2,062,589	+		PfGW456L13_1874	0.57	-2.0
2,062,589	+		PfGW456L13_1874	0.57	-2.4
2,062,589	+		PfGW456L13_1874	0.57	-2.1
2,062,589	+		PfGW456L13_1874	0.57	-1.4
2,062,589	+		PfGW456L13_1874	0.57	+1.0
2,062,590	-		PfGW456L13_1874	0.57	-0.9
2,062,590	-		PfGW456L13_1874	0.57	-0.0
2,062,590	-		PfGW456L13_1874	0.57	+1.6
2,062,590	-		PfGW456L13_1874	0.57	+0.8
2,062,590	-		PfGW456L13_1874	0.57	-0.5
2,062,616	+		PfGW456L13_1874	0.59	+1.0
2,063,109	-				-1.8
2,063,109	-				+0.5
2,063,131	+				-0.0
2,063,131	+				+0.8
2,063,131	+				-0.1
2,063,132	-				+1.0
2,063,132	-				+1.0
2,063,132	-				-2.0
2,063,132	-				-0.1
2,063,132	-				+1.1
2,063,166	+				-0.8
2,063,166	+				-1.8
2,063,167	-				-0.8
2,063,167	-				-1.0
2,063,187	+				+0.6
2,063,187	+				+1.5
2,063,187	+				+0.7
2,063,187	+				-0.7
2,063,188	-				+0.2
2,063,188	-				+1.1
2,063,188	-				+0.2
2,063,188	-				-0.1
2,063,196	+				+1.0
2,063,313	+		PfGW456L13_1875	0.10	+1.4
2,063,313	+		PfGW456L13_1875	0.10	-0.6
2,063,338	-		PfGW456L13_1875	0.12	-0.7
2,063,355	+		PfGW456L13_1875	0.13	-0.3
2,063,355	+		PfGW456L13_1875	0.13	-0.5
2,063,356	-		PfGW456L13_1875	0.13	-1.5
2,063,373	+		PfGW456L13_1875	0.15	+0.2
2,063,373	+		PfGW456L13_1875	0.15	+1.6
2,063,374	-		PfGW456L13_1875	0.15	+1.0
2,063,434	-		PfGW456L13_1875	0.19	-1.8
2,063,467	-		PfGW456L13_1875	0.21	+0.6
2,063,467	-		PfGW456L13_1875	0.21	-2.1
2,063,484	+		PfGW456L13_1875	0.22	+2.0
2,063,484	+		PfGW456L13_1875	0.22	+0.8
2,063,484	+		PfGW456L13_1875	0.22	-1.8
2,063,485	-		PfGW456L13_1875	0.22	+0.0
2,063,485	-		PfGW456L13_1875	0.22	-2.5
2,063,485	-		PfGW456L13_1875	0.22	-0.2
2,063,485	-		PfGW456L13_1875	0.22	+0.6
2,063,514	+		PfGW456L13_1875	0.24	+0.0
2,063,514	+		PfGW456L13_1875	0.24	+0.7
2,063,514	+		PfGW456L13_1875	0.24	+1.2
2,063,514	+		PfGW456L13_1875	0.24	+1.4
2,063,515	-		PfGW456L13_1875	0.25	-2.1
2,063,515	-		PfGW456L13_1875	0.25	+0.4
2,063,529	+		PfGW456L13_1875	0.25	+1.8
2,063,529	+		PfGW456L13_1875	0.25	+1.5
2,063,529	+		PfGW456L13_1875	0.25	+0.6
2,063,529	+		PfGW456L13_1875	0.25	+0.5
2,063,529	+		PfGW456L13_1875	0.25	+0.0
2,063,530	-		PfGW456L13_1875	0.26	-1.3
2,063,530	-		PfGW456L13_1875	0.26	-0.4
2,063,530	-		PfGW456L13_1875	0.26	+0.5
2,063,530	-		PfGW456L13_1875	0.26	+0.8
2,063,530	-		PfGW456L13_1875	0.26	-2.7
2,063,606	+		PfGW456L13_1875	0.31	+0.2
2,063,607	-		PfGW456L13_1875	0.31	-1.0