Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1089

Experiment: L-Tryptophan (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Tryptophan (C)
1,209,716	+		PfGW456L13_1088	0.54	+0.5
1,209,782	+		PfGW456L13_1088	0.61	+0.8
1,209,809	+		PfGW456L13_1088	0.64	+0.2
1,209,809	+		PfGW456L13_1088	0.64	-2.3
1,209,809	+		PfGW456L13_1088	0.64	+0.3
1,209,809	+		PfGW456L13_1088	0.64	+0.1
1,209,810	-		PfGW456L13_1088	0.64	-1.6
1,209,810	-		PfGW456L13_1088	0.64	-0.3
1,209,836	-		PfGW456L13_1088	0.67	+0.7
1,209,944	+		PfGW456L13_1088	0.78	+0.7
1,209,944	+		PfGW456L13_1088	0.78	+1.6
1,209,944	+		PfGW456L13_1088	0.78	-0.3
1,209,944	+		PfGW456L13_1088	0.78	-0.1
1,209,945	-		PfGW456L13_1088	0.78	-1.6
1,209,945	-		PfGW456L13_1088	0.78	+1.5
1,209,945	-		PfGW456L13_1088	0.78	-1.1
1,209,983	+		PfGW456L13_1088	0.82	+0.5
1,209,984	-		PfGW456L13_1088	0.82	-0.6
1,209,984	-		PfGW456L13_1088	0.82	+1.1
1,210,060	+				-0.4
1,210,060	+				-0.3
1,210,061	-				-0.2
1,210,065	+				+0.9
1,210,110	+				-0.1
1,210,110	+				+0.8
1,210,110	+				+0.5
1,210,110	+				+1.3
1,210,110	+				-1.2
1,210,110	+				+1.2
1,210,111	-				+0.4
1,210,111	-				-1.5
1,210,203	+				+0.5
1,210,203	+				-0.3
1,210,203	+				+0.2
1,210,204	-				-0.8
1,210,204	-				-0.8
1,210,204	-				-0.7
1,210,204	-				-4.1
1,210,204	-				-1.0
1,210,204	-				-3.8
1,210,204	-				-1.1
1,210,205	+				-0.1
1,210,205	+				-0.7
1,210,205	+				+0.0
1,210,205	+				-0.7
1,210,205	+				-1.9
1,210,205	+				+0.4
1,210,205	+				+0.6
1,210,205	+				-1.9
1,210,206	-				-1.9
1,210,206	-				-2.4
1,210,206	-				-1.7
1,210,206	-				-4.6
1,210,206	-				+0.2
1,210,206	-				-1.1
1,210,240	+				-1.3
1,210,267	+				+1.8
1,210,268	-				-0.5
1,210,277	+				-1.0
1,210,277	+				-1.7
1,210,277	+				+0.5
1,210,277	+				+0.6
1,210,277	+				+0.7
1,210,277	+				+0.6
1,210,277	+				+0.1
1,210,277	+				+0.3
1,210,277	+				+0.3
1,210,278	-				-0.6
1,210,278	-				-3.4
1,210,278	-				-1.6
1,210,278	-				-0.8
1,210,278	-				+0.6
1,210,278	-				+0.3
1,210,278	-				-0.7
1,210,278	-				-2.0
1,210,298	+				-0.9
1,210,298	+				+0.1
1,210,299	-				-4.0
1,210,299	-				-1.9
1,210,356	+				-1.0
1,210,357	-				+0.6
1,210,417	+				+0.5
1,210,477	+				-0.3
1,210,478	-				-0.1
1,210,478	-				+0.0
1,210,478	-				-1.3
1,210,524	-				-0.3
1,210,552	+				-1.2
1,210,590	+				+0.5
1,210,590	+				+0.2
1,210,591	-				-2.3
1,210,591	-				-2.3
1,210,845	+		PfGW456L13_1089	0.19	+0.7
1,210,846	-		PfGW456L13_1089	0.19	-0.0
1,211,011	+		PfGW456L13_1089	0.31	+0.5
1,211,011	+		PfGW456L13_1089	0.31	-0.5
1,211,011	+		PfGW456L13_1089	0.31	-0.4
1,211,011	+		PfGW456L13_1089	0.31	+0.6
1,211,011	+		PfGW456L13_1089	0.31	-0.3
1,211,011	+		PfGW456L13_1089	0.31	-0.7
1,211,011	+		PfGW456L13_1089	0.31	-1.4
1,211,011	+		PfGW456L13_1089	0.31	+0.1
1,211,012	-		PfGW456L13_1089	0.31	-0.3
1,211,012	-		PfGW456L13_1089	0.31	+1.4
1,211,012	-		PfGW456L13_1089	0.31	-0.2
1,211,012	-		PfGW456L13_1089	0.31	+0.4
1,211,012	-		PfGW456L13_1089	0.31	-0.5
1,211,012	-		PfGW456L13_1089	0.31	+0.0
1,211,012	-		PfGW456L13_1089	0.31	-0.4
1,211,012	-		PfGW456L13_1089	0.31	+0.7
1,211,012	-		PfGW456L13_1089	0.31	+0.3
1,211,014	+		PfGW456L13_1089	0.31	+0.4
1,211,014	+		PfGW456L13_1089	0.31	+0.8
1,211,015	-		PfGW456L13_1089	0.31	+0.9
1,211,015	-		PfGW456L13_1089	0.31	+0.8
1,211,133	+		PfGW456L13_1089	0.40	+0.1
1,211,133	+		PfGW456L13_1089	0.40	+1.4
1,211,162	+		PfGW456L13_1089	0.42	-1.7
1,211,162	+		PfGW456L13_1089	0.42	+0.3
1,211,162	+		PfGW456L13_1089	0.42	+0.7
1,211,162	+		PfGW456L13_1089	0.42	+1.3
1,211,162	+		PfGW456L13_1089	0.42	+0.3
1,211,163	-		PfGW456L13_1089	0.42	-1.0
1,211,491	+		PfGW456L13_1089	0.66	+0.4
1,211,491	+		PfGW456L13_1089	0.66	+0.4
1,211,491	+		PfGW456L13_1089	0.66	+1.3
1,211,491	+		PfGW456L13_1089	0.66	-1.1
1,211,539	+		PfGW456L13_1089	0.69	-0.6
1,211,539	+		PfGW456L13_1089	0.69	-3.9
1,211,540	-		PfGW456L13_1089	0.69	-1.1
1,211,540	-		PfGW456L13_1089	0.69	-0.7
1,211,540	-		PfGW456L13_1089	0.69	+1.1
1,211,911	+				+0.4
1,211,911	+				+1.5
1,211,911	+				+1.0
1,211,911	+				-0.7
1,211,911	+				-1.3
1,211,911	+				-0.1
1,211,911	+				+0.0
1,211,912	-				+0.1
1,211,912	-				-0.4
1,211,912	-				+1.7
1,211,912	-				+0.3
1,211,912	-				+0.6
1,211,912	-				-0.9
1,211,912	-				-0.1
1,211,912	-				+0.6
1,211,913	+				-1.2
1,211,913	+				+0.0
1,211,913	+				+2.8
1,211,914	-				+0.5
1,211,914	-				+0.3
1,211,914	-				-0.7
1,211,914	-				-0.3
1,211,914	-				-0.3
1,212,028	-				-0.9
1,212,073	-				+0.8
1,212,073	-				+0.1
1,212,073	-				-0.1
1,212,073	-				-0.4
1,212,073	-				-0.2
1,212,073	-				-0.4
1,212,128	+				+0.9
1,212,129	-				+1.5
1,212,140	+				+0.8
1,212,141	-				-0.2
1,212,146	+				+0.5
1,212,147	-				-1.1
1,212,147	-				+0.3
1,212,310	-				+0.3
1,212,310	-				+1.0
1,212,335	+				-0.1
1,212,335	+				-0.7
1,212,335	+				-1.7
1,212,335	+				-1.4
1,212,335	+				+0.5
1,212,335	+				-0.9
1,212,335	+				-0.0
1,212,335	+				+0.0
1,212,335	+				+0.5
1,212,335	+				-0.3
1,212,335	+				+0.1
1,212,335	+				+0.0
1,212,335	+				-0.1
1,212,336	-				-1.3
1,212,336	-				-0.1
1,212,336	-				-2.1
1,212,336	-				+0.7
1,212,336	-				-2.1
1,212,336	-				+1.0
1,212,336	-				-0.2
1,212,336	-				-0.1
1,212,336	-				+2.5
1,212,336	-				+1.0
1,212,336	-				+0.5
1,212,336	-				+2.1
1,212,336	-				+1.1
1,212,336	-				+0.8
1,212,336	-				-2.4
1,212,336	-				+1.4
1,212,337	+				+0.2
1,212,337	+				+1.2
1,212,337	+				+0.9
1,212,337	+				-0.1
1,212,337	+				-0.5
1,212,337	+				+0.0
1,212,337	+				-0.1
1,212,337	+				+0.2
1,212,337	+				+0.7
1,212,337	+				+1.6
1,212,338	-				+0.1
1,212,338	-				+2.0
1,212,338	-				+1.5
1,212,338	-				-0.4
1,212,338	-				-0.6
1,212,338	-				+1.7
1,212,338	-				+0.9
1,212,338	-				+0.7
1,212,338	-				-1.2
1,212,338	-				-0.7
1,212,338	-				+1.1
1,212,338	-				-1.3
1,212,338	-				+0.2
1,212,388	+				-1.0
1,212,412	+				-0.1
1,212,412	+				-0.0
1,212,412	+				+0.5
1,212,447	+				-2.5
1,212,447	+				-0.1