Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS24195 and PFLU_RS24200 are separated by 270 nucleotides PFLU_RS24200 and PFLU_RS24205 are separated by 350 nucleotides PFLU_RS24205 and PFLU_RS24210 are separated by 91 nucleotides
PFLU_RS24195: PFLU_RS24195 - methyl-accepting chemotaxis protein, at 5,416,159 to 5,418,048
_RS24195
PFLU_RS24200: PFLU_RS24200 - formyltetrahydrofolate deformylase, at 5,418,319 to 5,419,167
_RS24200
PFLU_RS24205: PFLU_RS24205 - DNA binding protein, at 5,419,518 to 5,419,892
_RS24205
PFLU_RS24210: PFLU_RS24210 - exodeoxyribonuclease I, at 5,419,984 to 5,421,411
_RS24210
Position (kb) 5418
5419
5420 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5417.517 kb on + strand, within PFLU_RS24195 at 5417.518 kb on - strand, within PFLU_RS24195 at 5417.518 kb on - strand, within PFLU_RS24195 at 5417.563 kb on - strand, within PFLU_RS24195 at 5417.563 kb on - strand, within PFLU_RS24195 at 5418.085 kb on + strand at 5418.085 kb on + strand at 5419.232 kb on - strand at 5419.245 kb on + strand at 5419.277 kb on - strand at 5419.277 kb on - strand at 5419.285 kb on - strand at 5419.292 kb on + strand at 5419.292 kb on + strand at 5419.301 kb on + strand at 5419.301 kb on + strand at 5419.302 kb on - strand at 5419.302 kb on - strand at 5419.303 kb on + strand at 5419.303 kb on + strand at 5419.303 kb on + strand at 5419.304 kb on - strand at 5419.312 kb on - strand at 5419.325 kb on - strand at 5419.359 kb on + strand at 5419.375 kb on + strand at 5419.375 kb on + strand at 5419.375 kb on + strand at 5419.375 kb on + strand at 5419.375 kb on + strand at 5419.375 kb on + strand at 5419.376 kb on - strand at 5419.392 kb on + strand at 5419.392 kb on + strand at 5419.401 kb on + strand at 5419.402 kb on - strand at 5419.417 kb on - strand at 5419.437 kb on + strand at 5419.445 kb on + strand at 5419.502 kb on - strand at 5419.502 kb on - strand at 5419.502 kb on - strand at 5419.502 kb on - strand at 5419.505 kb on + strand at 5419.505 kb on + strand at 5419.506 kb on - strand at 5419.506 kb on - strand at 5419.506 kb on - strand at 5419.506 kb on - strand at 5419.510 kb on + strand at 5419.511 kb on - strand at 5419.511 kb on - strand at 5419.536 kb on + strand at 5419.556 kb on + strand, within PFLU_RS24205 at 5419.557 kb on - strand, within PFLU_RS24205 at 5419.557 kb on - strand, within PFLU_RS24205 at 5419.557 kb on - strand, within PFLU_RS24205 at 5419.656 kb on + strand, within PFLU_RS24205 at 5419.656 kb on + strand, within PFLU_RS24205 at 5419.656 kb on + strand, within PFLU_RS24205 at 5419.657 kb on - strand, within PFLU_RS24205 at 5419.771 kb on - strand, within PFLU_RS24205 at 5419.986 kb on - strand at 5420.019 kb on - strand at 5420.019 kb on - strand at 5420.019 kb on - strand at 5420.091 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 5,417,517 + PFLU_RS24195 0.72 -2.7 5,417,518 - PFLU_RS24195 0.72 -1.5 5,417,518 - PFLU_RS24195 0.72 -1.6 5,417,563 - PFLU_RS24195 0.74 +0.7 5,417,563 - PFLU_RS24195 0.74 -1.1 5,418,085 + -1.3 5,418,085 + +0.3 5,419,232 - -0.1 5,419,245 + +0.2 5,419,277 - -0.4 5,419,277 - -1.5 5,419,285 - +0.9 5,419,292 + -0.6 5,419,292 + +1.5 5,419,301 + +1.1 5,419,301 + +0.4 5,419,302 - +1.5 5,419,302 - -0.0 5,419,303 + -0.1 5,419,303 + -0.5 5,419,303 + -0.6 5,419,304 - -0.5 5,419,312 - +0.4 5,419,325 - -0.0 5,419,359 + -1.4 5,419,375 + -1.0 5,419,375 + +1.4 5,419,375 + -1.5 5,419,375 + -2.1 5,419,375 + -0.4 5,419,375 + +0.9 5,419,376 - -1.7 5,419,392 + +1.0 5,419,392 + -0.0 5,419,401 + -0.2 5,419,402 - +1.1 5,419,417 - -0.7 5,419,437 + -0.2 5,419,445 + +1.7 5,419,502 - +1.9 5,419,502 - +0.3 5,419,502 - -2.4 5,419,502 - +0.3 5,419,505 + -0.1 5,419,505 + +0.2 5,419,506 - +1.5 5,419,506 - +0.1 5,419,506 - +1.8 5,419,506 - +0.1 5,419,510 + -0.4 5,419,511 - +0.1 5,419,511 - +0.8 5,419,536 + +1.3 5,419,556 + PFLU_RS24205 0.10 -0.4 5,419,557 - PFLU_RS24205 0.10 +0.1 5,419,557 - PFLU_RS24205 0.10 +1.2 5,419,557 - PFLU_RS24205 0.10 +0.3 5,419,656 + PFLU_RS24205 0.37 +0.5 5,419,656 + PFLU_RS24205 0.37 +0.8 5,419,656 + PFLU_RS24205 0.37 -1.0 5,419,657 - PFLU_RS24205 0.37 +1.1 5,419,771 - PFLU_RS24205 0.67 +0.5 5,419,986 - -1.1 5,420,019 - -0.8 5,420,019 - -1.1 5,420,019 - -0.9 5,420,091 + +1.3
Or see this region's nucleotide sequence