Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS21125 and PFLU_RS21130 are separated by 302 nucleotides PFLU_RS21130 and PFLU_RS21135 are separated by 57 nucleotides PFLU_RS21135 and PFLU_RS21140 are separated by 46 nucleotides
PFLU_RS21125: PFLU_RS21125 - FMN-dependent L-lactate dehydrogenase LldD, at 4,747,051 to 4,748,193
_RS21125
PFLU_RS21130: PFLU_RS21130 - GGDEF domain-containing protein, at 4,748,496 to 4,749,422
_RS21130
PFLU_RS21135: PFLU_RS21135 - TenA family transcriptional regulator, at 4,749,480 to 4,750,280
_RS21135
PFLU_RS21140: PFLU_RS21140 - EAL domain-containing protein, at 4,750,327 to 4,752,789
_RS21140
Position (kb) 4748
4749
4750 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4747.593 kb on + strand, within PFLU_RS21125 at 4747.593 kb on + strand, within PFLU_RS21125 at 4747.593 kb on + strand, within PFLU_RS21125 at 4747.593 kb on + strand, within PFLU_RS21125 at 4747.593 kb on + strand, within PFLU_RS21125 at 4747.593 kb on + strand, within PFLU_RS21125 at 4747.593 kb on + strand, within PFLU_RS21125 at 4747.593 kb on + strand, within PFLU_RS21125 at 4747.593 kb on + strand, within PFLU_RS21125 at 4747.594 kb on - strand, within PFLU_RS21125 at 4747.594 kb on - strand, within PFLU_RS21125 at 4747.594 kb on - strand, within PFLU_RS21125 at 4747.594 kb on - strand, within PFLU_RS21125 at 4747.594 kb on - strand, within PFLU_RS21125 at 4747.594 kb on - strand, within PFLU_RS21125 at 4747.594 kb on - strand, within PFLU_RS21125 at 4747.594 kb on - strand, within PFLU_RS21125 at 4747.594 kb on - strand, within PFLU_RS21125 at 4747.668 kb on + strand, within PFLU_RS21125 at 4747.668 kb on + strand, within PFLU_RS21125 at 4747.669 kb on - strand, within PFLU_RS21125 at 4747.678 kb on + strand, within PFLU_RS21125 at 4747.678 kb on + strand, within PFLU_RS21125 at 4747.678 kb on + strand, within PFLU_RS21125 at 4747.678 kb on + strand, within PFLU_RS21125 at 4747.679 kb on - strand, within PFLU_RS21125 at 4747.679 kb on - strand, within PFLU_RS21125 at 4747.679 kb on - strand, within PFLU_RS21125 at 4747.679 kb on - strand, within PFLU_RS21125 at 4747.708 kb on + strand, within PFLU_RS21125 at 4747.708 kb on + strand, within PFLU_RS21125 at 4747.708 kb on + strand, within PFLU_RS21125 at 4747.708 kb on + strand, within PFLU_RS21125 at 4747.708 kb on + strand, within PFLU_RS21125 at 4747.708 kb on + strand, within PFLU_RS21125 at 4747.708 kb on + strand, within PFLU_RS21125 at 4747.708 kb on + strand, within PFLU_RS21125 at 4747.708 kb on + strand, within PFLU_RS21125 at 4747.708 kb on + strand, within PFLU_RS21125 at 4747.708 kb on + strand, within PFLU_RS21125 at 4747.708 kb on + strand, within PFLU_RS21125 at 4747.709 kb on - strand, within PFLU_RS21125 at 4747.709 kb on - strand, within PFLU_RS21125 at 4747.709 kb on - strand, within PFLU_RS21125 at 4747.709 kb on - strand, within PFLU_RS21125 at 4747.709 kb on - strand, within PFLU_RS21125 at 4747.709 kb on - strand, within PFLU_RS21125 at 4747.709 kb on - strand, within PFLU_RS21125 at 4747.709 kb on - strand, within PFLU_RS21125 at 4748.050 kb on + strand, within PFLU_RS21125 at 4748.050 kb on + strand, within PFLU_RS21125 at 4748.051 kb on - strand, within PFLU_RS21125 at 4748.141 kb on + strand at 4748.141 kb on + strand at 4748.141 kb on + strand at 4748.142 kb on - strand at 4748.142 kb on - strand at 4748.142 kb on - strand at 4748.177 kb on + strand at 4748.191 kb on + strand at 4748.211 kb on + strand at 4748.254 kb on - strand at 4748.277 kb on + strand at 4748.278 kb on - strand at 4748.280 kb on + strand at 4748.367 kb on + strand at 4748.367 kb on + strand at 4748.369 kb on + strand at 4748.370 kb on - strand at 4748.370 kb on - strand at 4748.390 kb on - strand at 4748.398 kb on - strand at 4748.400 kb on + strand at 4748.400 kb on + strand at 4748.401 kb on - strand at 4748.401 kb on - strand at 4748.401 kb on - strand at 4748.428 kb on - strand at 4748.464 kb on - strand at 4748.473 kb on + strand at 4748.473 kb on + strand at 4748.473 kb on + strand at 4748.473 kb on + strand at 4748.473 kb on + strand at 4748.480 kb on + strand at 4748.480 kb on + strand at 4748.480 kb on + strand at 4748.481 kb on - strand at 4748.508 kb on - strand at 4748.657 kb on + strand, within PFLU_RS21130 at 4748.715 kb on + strand, within PFLU_RS21130 at 4748.716 kb on - strand, within PFLU_RS21130 at 4748.778 kb on + strand, within PFLU_RS21130 at 4748.778 kb on + strand, within PFLU_RS21130 at 4748.778 kb on + strand, within PFLU_RS21130 at 4748.778 kb on + strand, within PFLU_RS21130 at 4748.779 kb on - strand, within PFLU_RS21130 at 4748.779 kb on - strand, within PFLU_RS21130 at 4748.779 kb on - strand, within PFLU_RS21130 at 4748.779 kb on - strand, within PFLU_RS21130 at 4748.779 kb on - strand, within PFLU_RS21130 at 4748.889 kb on + strand, within PFLU_RS21130 at 4748.890 kb on - strand, within PFLU_RS21130 at 4749.106 kb on + strand, within PFLU_RS21130 at 4749.106 kb on + strand, within PFLU_RS21130 at 4749.106 kb on + strand, within PFLU_RS21130 at 4749.106 kb on + strand, within PFLU_RS21130 at 4749.107 kb on - strand, within PFLU_RS21130 at 4749.107 kb on - strand, within PFLU_RS21130 at 4749.107 kb on - strand, within PFLU_RS21130 at 4749.107 kb on - strand, within PFLU_RS21130 at 4749.107 kb on - strand, within PFLU_RS21130 at 4749.107 kb on - strand, within PFLU_RS21130 at 4749.107 kb on - strand, within PFLU_RS21130 at 4749.267 kb on + strand, within PFLU_RS21130 at 4749.373 kb on + strand at 4749.375 kb on + strand at 4749.375 kb on + strand at 4749.375 kb on + strand at 4749.375 kb on + strand at 4749.375 kb on + strand at 4749.375 kb on + strand at 4749.375 kb on + strand at 4749.375 kb on + strand at 4749.375 kb on + strand at 4749.375 kb on + strand at 4749.375 kb on + strand at 4749.376 kb on - strand at 4749.376 kb on - strand at 4749.376 kb on - strand at 4749.376 kb on - strand at 4749.376 kb on - strand at 4749.376 kb on - strand at 4749.376 kb on - strand at 4749.376 kb on - strand at 4749.376 kb on - strand at 4749.376 kb on - strand at 4749.376 kb on - strand at 4749.577 kb on + strand, within PFLU_RS21135 at 4749.577 kb on + strand, within PFLU_RS21135 at 4749.577 kb on + strand, within PFLU_RS21135 at 4749.577 kb on + strand, within PFLU_RS21135 at 4749.577 kb on + strand, within PFLU_RS21135 at 4749.577 kb on + strand, within PFLU_RS21135 at 4749.577 kb on + strand, within PFLU_RS21135 at 4749.577 kb on + strand, within PFLU_RS21135 at 4749.577 kb on + strand, within PFLU_RS21135 at 4749.578 kb on - strand, within PFLU_RS21135 at 4749.578 kb on - strand, within PFLU_RS21135 at 4749.578 kb on - strand, within PFLU_RS21135 at 4749.578 kb on - strand, within PFLU_RS21135 at 4749.578 kb on - strand, within PFLU_RS21135 at 4749.578 kb on - strand, within PFLU_RS21135 at 4749.578 kb on - strand, within PFLU_RS21135 at 4749.578 kb on - strand, within PFLU_RS21135 at 4749.578 kb on - strand, within PFLU_RS21135 at 4749.578 kb on - strand, within PFLU_RS21135 at 4749.578 kb on - strand, within PFLU_RS21135 at 4749.578 kb on - strand, within PFLU_RS21135 at 4749.578 kb on - strand, within PFLU_RS21135 at 4749.578 kb on - strand, within PFLU_RS21135 at 4749.583 kb on + strand, within PFLU_RS21135 at 4749.583 kb on + strand, within PFLU_RS21135 at 4749.583 kb on + strand, within PFLU_RS21135 at 4749.583 kb on + strand, within PFLU_RS21135 at 4749.583 kb on + strand, within PFLU_RS21135 at 4749.583 kb on + strand, within PFLU_RS21135 at 4749.584 kb on - strand, within PFLU_RS21135 at 4749.584 kb on - strand, within PFLU_RS21135 at 4749.584 kb on - strand, within PFLU_RS21135 at 4749.584 kb on - strand, within PFLU_RS21135 at 4749.757 kb on + strand, within PFLU_RS21135 at 4749.757 kb on + strand, within PFLU_RS21135 at 4749.758 kb on - strand, within PFLU_RS21135 at 4749.758 kb on - strand, within PFLU_RS21135 at 4749.814 kb on + strand, within PFLU_RS21135 at 4749.815 kb on - strand, within PFLU_RS21135 at 4749.815 kb on - strand, within PFLU_RS21135 at 4749.961 kb on + strand, within PFLU_RS21135 at 4749.961 kb on + strand, within PFLU_RS21135 at 4750.069 kb on + strand, within PFLU_RS21135 at 4750.069 kb on + strand, within PFLU_RS21135 at 4750.069 kb on + strand, within PFLU_RS21135 at 4750.069 kb on + strand, within PFLU_RS21135 at 4750.069 kb on + strand, within PFLU_RS21135 at 4750.069 kb on + strand, within PFLU_RS21135 at 4750.069 kb on + strand, within PFLU_RS21135 at 4750.069 kb on + strand, within PFLU_RS21135 at 4750.069 kb on + strand, within PFLU_RS21135 at 4750.069 kb on + strand, within PFLU_RS21135 at 4750.069 kb on + strand, within PFLU_RS21135 at 4750.069 kb on + strand, within PFLU_RS21135 at 4750.069 kb on + strand, within PFLU_RS21135 at 4750.069 kb on + strand, within PFLU_RS21135 at 4750.069 kb on + strand, within PFLU_RS21135 at 4750.069 kb on + strand, within PFLU_RS21135 at 4750.069 kb on + strand, within PFLU_RS21135 at 4750.069 kb on + strand, within PFLU_RS21135 at 4750.069 kb on + strand, within PFLU_RS21135 at 4750.070 kb on - strand, within PFLU_RS21135 at 4750.070 kb on - strand, within PFLU_RS21135 at 4750.070 kb on - strand, within PFLU_RS21135 at 4750.070 kb on - strand, within PFLU_RS21135 at 4750.070 kb on - strand, within PFLU_RS21135 at 4750.070 kb on - strand, within PFLU_RS21135 at 4750.070 kb on - strand, within PFLU_RS21135 at 4750.070 kb on - strand, within PFLU_RS21135 at 4750.070 kb on - strand, within PFLU_RS21135 at 4750.070 kb on - strand, within PFLU_RS21135 at 4750.070 kb on - strand, within PFLU_RS21135 at 4750.070 kb on - strand, within PFLU_RS21135 at 4750.112 kb on - strand, within PFLU_RS21135 at 4750.159 kb on + strand, within PFLU_RS21135 at 4750.160 kb on - strand, within PFLU_RS21135 at 4750.297 kb on + strand at 4750.298 kb on - strand at 4750.309 kb on + strand at 4750.309 kb on + strand at 4750.393 kb on - strand at 4750.401 kb on + strand at 4750.401 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 4,747,593 + PFLU_RS21125 0.47 +0.5 4,747,593 + PFLU_RS21125 0.47 -0.2 4,747,593 + PFLU_RS21125 0.47 +0.8 4,747,593 + PFLU_RS21125 0.47 -1.1 4,747,593 + PFLU_RS21125 0.47 -0.6 4,747,593 + PFLU_RS21125 0.47 -0.7 4,747,593 + PFLU_RS21125 0.47 +0.4 4,747,593 + PFLU_RS21125 0.47 -1.1 4,747,593 + PFLU_RS21125 0.47 -0.5 4,747,594 - PFLU_RS21125 0.48 +1.4 4,747,594 - PFLU_RS21125 0.48 +0.7 4,747,594 - PFLU_RS21125 0.48 -1.6 4,747,594 - PFLU_RS21125 0.48 -1.1 4,747,594 - PFLU_RS21125 0.48 +1.2 4,747,594 - PFLU_RS21125 0.48 -1.7 4,747,594 - PFLU_RS21125 0.48 +1.3 4,747,594 - PFLU_RS21125 0.48 -0.8 4,747,594 - PFLU_RS21125 0.48 -0.1 4,747,668 + PFLU_RS21125 0.54 +0.3 4,747,668 + PFLU_RS21125 0.54 -2.5 4,747,669 - PFLU_RS21125 0.54 -2.7 4,747,678 + PFLU_RS21125 0.55 -1.7 4,747,678 + PFLU_RS21125 0.55 +0.2 4,747,678 + PFLU_RS21125 0.55 -0.3 4,747,678 + PFLU_RS21125 0.55 +0.4 4,747,679 - PFLU_RS21125 0.55 -0.2 4,747,679 - PFLU_RS21125 0.55 -2.5 4,747,679 - PFLU_RS21125 0.55 +1.0 4,747,679 - PFLU_RS21125 0.55 -1.5 4,747,708 + PFLU_RS21125 0.57 +0.1 4,747,708 + PFLU_RS21125 0.57 +0.7 4,747,708 + PFLU_RS21125 0.57 -1.2 4,747,708 + PFLU_RS21125 0.57 +0.5 4,747,708 + PFLU_RS21125 0.57 +1.5 4,747,708 + PFLU_RS21125 0.57 +1.5 4,747,708 + PFLU_RS21125 0.57 -1.4 4,747,708 + PFLU_RS21125 0.57 -0.7 4,747,708 + PFLU_RS21125 0.57 +0.2 4,747,708 + PFLU_RS21125 0.57 +0.6 4,747,708 + PFLU_RS21125 0.57 -1.5 4,747,708 + PFLU_RS21125 0.57 -2.1 4,747,709 - PFLU_RS21125 0.58 +0.9 4,747,709 - PFLU_RS21125 0.58 -0.3 4,747,709 - PFLU_RS21125 0.58 +1.1 4,747,709 - PFLU_RS21125 0.58 +1.5 4,747,709 - PFLU_RS21125 0.58 +0.9 4,747,709 - PFLU_RS21125 0.58 +1.0 4,747,709 - PFLU_RS21125 0.58 +0.2 4,747,709 - PFLU_RS21125 0.58 -2.5 4,748,050 + PFLU_RS21125 0.87 -3.1 4,748,050 + PFLU_RS21125 0.87 -0.5 4,748,051 - PFLU_RS21125 0.87 -0.1 4,748,141 + -0.6 4,748,141 + +0.5 4,748,141 + -0.1 4,748,142 - -0.6 4,748,142 - +0.3 4,748,142 - +1.0 4,748,177 + -2.0 4,748,191 + +0.5 4,748,211 + +3.3 4,748,254 - -2.8 4,748,277 + +2.9 4,748,278 - +1.0 4,748,280 + -0.6 4,748,367 + +0.3 4,748,367 + +0.1 4,748,369 + -1.1 4,748,370 - +0.0 4,748,370 - +0.3 4,748,390 - -0.7 4,748,398 - -0.3 4,748,400 + +1.9 4,748,400 + -0.4 4,748,401 - -0.7 4,748,401 - +1.4 4,748,401 - +1.2 4,748,428 - +0.3 4,748,464 - -2.0 4,748,473 + -0.1 4,748,473 + +1.3 4,748,473 + +0.4 4,748,473 + +0.4 4,748,473 + -0.2 4,748,480 + +0.7 4,748,480 + +0.5 4,748,480 + -2.5 4,748,481 - -1.7 4,748,508 - +0.4 4,748,657 + PFLU_RS21130 0.17 +1.0 4,748,715 + PFLU_RS21130 0.24 +1.4 4,748,716 - PFLU_RS21130 0.24 -0.5 4,748,778 + PFLU_RS21130 0.30 +2.0 4,748,778 + PFLU_RS21130 0.30 +1.0 4,748,778 + PFLU_RS21130 0.30 +1.5 4,748,778 + PFLU_RS21130 0.30 -0.2 4,748,779 - PFLU_RS21130 0.31 -0.5 4,748,779 - PFLU_RS21130 0.31 -1.4 4,748,779 - PFLU_RS21130 0.31 -1.6 4,748,779 - PFLU_RS21130 0.31 +0.1 4,748,779 - PFLU_RS21130 0.31 +0.4 4,748,889 + PFLU_RS21130 0.42 -0.5 4,748,890 - PFLU_RS21130 0.43 +1.0 4,749,106 + PFLU_RS21130 0.66 +2.2 4,749,106 + PFLU_RS21130 0.66 -0.2 4,749,106 + PFLU_RS21130 0.66 +0.2 4,749,106 + PFLU_RS21130 0.66 -0.3 4,749,107 - PFLU_RS21130 0.66 +1.4 4,749,107 - PFLU_RS21130 0.66 +0.8 4,749,107 - PFLU_RS21130 0.66 +1.1 4,749,107 - PFLU_RS21130 0.66 +1.0 4,749,107 - PFLU_RS21130 0.66 +0.1 4,749,107 - PFLU_RS21130 0.66 +0.1 4,749,107 - PFLU_RS21130 0.66 -1.2 4,749,267 + PFLU_RS21130 0.83 -1.9 4,749,373 + -2.0 4,749,375 + +1.4 4,749,375 + +1.1 4,749,375 + +1.7 4,749,375 + -0.0 4,749,375 + -0.2 4,749,375 + +0.4 4,749,375 + -0.7 4,749,375 + -0.4 4,749,375 + +1.3 4,749,375 + -0.5 4,749,375 + +1.5 4,749,376 - +0.4 4,749,376 - -2.1 4,749,376 - +0.2 4,749,376 - -2.2 4,749,376 - -1.6 4,749,376 - -1.5 4,749,376 - -1.1 4,749,376 - +1.2 4,749,376 - -0.5 4,749,376 - -3.0 4,749,376 - +1.4 4,749,577 + PFLU_RS21135 0.12 -0.5 4,749,577 + PFLU_RS21135 0.12 +0.1 4,749,577 + PFLU_RS21135 0.12 +2.3 4,749,577 + PFLU_RS21135 0.12 +0.7 4,749,577 + PFLU_RS21135 0.12 +0.1 4,749,577 + PFLU_RS21135 0.12 -0.2 4,749,577 + PFLU_RS21135 0.12 -1.3 4,749,577 + PFLU_RS21135 0.12 -0.8 4,749,577 + PFLU_RS21135 0.12 -0.2 4,749,578 - PFLU_RS21135 0.12 +1.9 4,749,578 - PFLU_RS21135 0.12 +0.1 4,749,578 - PFLU_RS21135 0.12 +0.8 4,749,578 - PFLU_RS21135 0.12 -0.5 4,749,578 - PFLU_RS21135 0.12 +0.4 4,749,578 - PFLU_RS21135 0.12 +0.3 4,749,578 - PFLU_RS21135 0.12 -0.8 4,749,578 - PFLU_RS21135 0.12 +0.0 4,749,578 - PFLU_RS21135 0.12 -2.9 4,749,578 - PFLU_RS21135 0.12 +1.0 4,749,578 - PFLU_RS21135 0.12 +2.1 4,749,578 - PFLU_RS21135 0.12 -0.0 4,749,578 - PFLU_RS21135 0.12 -1.5 4,749,578 - PFLU_RS21135 0.12 +0.3 4,749,583 + PFLU_RS21135 0.13 +0.9 4,749,583 + PFLU_RS21135 0.13 +0.4 4,749,583 + PFLU_RS21135 0.13 -0.6 4,749,583 + PFLU_RS21135 0.13 +1.1 4,749,583 + PFLU_RS21135 0.13 +3.1 4,749,583 + PFLU_RS21135 0.13 -1.0 4,749,584 - PFLU_RS21135 0.13 -0.4 4,749,584 - PFLU_RS21135 0.13 -0.1 4,749,584 - PFLU_RS21135 0.13 -0.5 4,749,584 - PFLU_RS21135 0.13 +0.3 4,749,757 + PFLU_RS21135 0.35 -0.9 4,749,757 + PFLU_RS21135 0.35 -1.1 4,749,758 - PFLU_RS21135 0.35 +0.6 4,749,758 - PFLU_RS21135 0.35 +0.4 4,749,814 + PFLU_RS21135 0.42 -2.0 4,749,815 - PFLU_RS21135 0.42 -1.5 4,749,815 - PFLU_RS21135 0.42 -0.4 4,749,961 + PFLU_RS21135 0.60 +1.9 4,749,961 + PFLU_RS21135 0.60 +1.9 4,750,069 + PFLU_RS21135 0.74 +1.0 4,750,069 + PFLU_RS21135 0.74 +0.0 4,750,069 + PFLU_RS21135 0.74 -0.3 4,750,069 + PFLU_RS21135 0.74 +1.3 4,750,069 + PFLU_RS21135 0.74 -0.5 4,750,069 + PFLU_RS21135 0.74 -0.1 4,750,069 + PFLU_RS21135 0.74 -0.0 4,750,069 + PFLU_RS21135 0.74 +0.8 4,750,069 + PFLU_RS21135 0.74 -2.7 4,750,069 + PFLU_RS21135 0.74 -0.0 4,750,069 + PFLU_RS21135 0.74 -0.4 4,750,069 + PFLU_RS21135 0.74 -0.6 4,750,069 + PFLU_RS21135 0.74 -1.0 4,750,069 + PFLU_RS21135 0.74 -2.4 4,750,069 + PFLU_RS21135 0.74 +0.6 4,750,069 + PFLU_RS21135 0.74 -0.0 4,750,069 + PFLU_RS21135 0.74 -0.6 4,750,069 + PFLU_RS21135 0.74 -0.5 4,750,069 + PFLU_RS21135 0.74 +1.1 4,750,070 - PFLU_RS21135 0.74 -1.1 4,750,070 - PFLU_RS21135 0.74 +0.3 4,750,070 - PFLU_RS21135 0.74 +0.4 4,750,070 - PFLU_RS21135 0.74 -0.0 4,750,070 - PFLU_RS21135 0.74 -2.6 4,750,070 - PFLU_RS21135 0.74 +1.3 4,750,070 - PFLU_RS21135 0.74 -1.7 4,750,070 - PFLU_RS21135 0.74 -1.1 4,750,070 - PFLU_RS21135 0.74 -1.4 4,750,070 - PFLU_RS21135 0.74 +1.1 4,750,070 - PFLU_RS21135 0.74 -0.6 4,750,070 - PFLU_RS21135 0.74 +1.6 4,750,112 - PFLU_RS21135 0.79 -2.7 4,750,159 + PFLU_RS21135 0.85 +1.3 4,750,160 - PFLU_RS21135 0.85 +0.1 4,750,297 + -0.0 4,750,298 - +2.0 4,750,309 + +0.9 4,750,309 + +1.1 4,750,393 - -0.1 4,750,401 + +0.5 4,750,401 + -2.3
Or see this region's nucleotide sequence