Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS21020 and PFLU_RS21025 are separated by 273 nucleotides PFLU_RS21025 and PFLU_RS21030 overlap by 50 nucleotides PFLU_RS21030 and PFLU_RS21035 are separated by 157 nucleotides
PFLU_RS21020: PFLU_RS21020 - YeeE/YedE family protein, at 4,724,520 to 4,725,731
_RS21020
PFLU_RS21025: PFLU_RS21025 - MFS transporter, at 4,726,005 to 4,727,273
_RS21025
PFLU_RS21030: PFLU_RS21030 - DNA/RNA non-specific endonuclease, at 4,727,224 to 4,728,021
_RS21030
PFLU_RS21035: PFLU_RS21035 - SDR family oxidoreductase, at 4,728,179 to 4,729,240
_RS21035
Position (kb) 4726
4727
4728 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4725.082 kb on - strand, within PFLU_RS21020 at 4725.533 kb on + strand, within PFLU_RS21020 at 4725.574 kb on + strand, within PFLU_RS21020 at 4725.574 kb on + strand, within PFLU_RS21020 at 4725.575 kb on - strand, within PFLU_RS21020 at 4725.777 kb on + strand at 4725.779 kb on + strand at 4725.796 kb on - strand at 4725.796 kb on - strand at 4725.952 kb on + strand at 4725.952 kb on + strand at 4725.953 kb on - strand at 4725.953 kb on - strand at 4725.969 kb on + strand at 4725.969 kb on + strand at 4725.969 kb on + strand at 4725.970 kb on - strand at 4725.970 kb on - strand at 4725.999 kb on - strand at 4726.233 kb on + strand, within PFLU_RS21025 at 4726.234 kb on - strand, within PFLU_RS21025 at 4726.338 kb on + strand, within PFLU_RS21025 at 4726.338 kb on + strand, within PFLU_RS21025 at 4726.338 kb on + strand, within PFLU_RS21025 at 4726.338 kb on + strand, within PFLU_RS21025 at 4726.338 kb on + strand, within PFLU_RS21025 at 4726.338 kb on + strand, within PFLU_RS21025 at 4726.338 kb on + strand, within PFLU_RS21025 at 4726.338 kb on + strand, within PFLU_RS21025 at 4726.338 kb on + strand, within PFLU_RS21025 at 4726.338 kb on + strand, within PFLU_RS21025 at 4726.338 kb on + strand, within PFLU_RS21025 at 4726.338 kb on + strand, within PFLU_RS21025 at 4726.338 kb on + strand, within PFLU_RS21025 at 4726.338 kb on + strand, within PFLU_RS21025 at 4726.339 kb on - strand, within PFLU_RS21025 at 4726.339 kb on - strand, within PFLU_RS21025 at 4726.339 kb on - strand, within PFLU_RS21025 at 4726.339 kb on - strand, within PFLU_RS21025 at 4726.339 kb on - strand, within PFLU_RS21025 at 4726.339 kb on - strand, within PFLU_RS21025 at 4726.339 kb on - strand, within PFLU_RS21025 at 4726.339 kb on - strand, within PFLU_RS21025 at 4726.339 kb on - strand, within PFLU_RS21025 at 4726.339 kb on - strand, within PFLU_RS21025 at 4726.339 kb on - strand, within PFLU_RS21025 at 4726.339 kb on - strand, within PFLU_RS21025 at 4726.339 kb on - strand, within PFLU_RS21025 at 4726.339 kb on - strand, within PFLU_RS21025 at 4726.339 kb on - strand, within PFLU_RS21025 at 4726.656 kb on + strand, within PFLU_RS21025 at 4726.656 kb on + strand, within PFLU_RS21025 at 4726.656 kb on + strand, within PFLU_RS21025 at 4726.786 kb on - strand, within PFLU_RS21025 at 4726.932 kb on + strand, within PFLU_RS21025 at 4727.188 kb on - strand at 4727.188 kb on - strand at 4727.188 kb on - strand at 4727.189 kb on + strand at 4727.189 kb on + strand at 4727.300 kb on + strand at 4727.300 kb on + strand at 4727.300 kb on + strand at 4727.345 kb on + strand, within PFLU_RS21030 at 4727.345 kb on + strand, within PFLU_RS21030 at 4727.345 kb on + strand, within PFLU_RS21030 at 4727.346 kb on - strand, within PFLU_RS21030 at 4727.346 kb on - strand, within PFLU_RS21030 at 4727.376 kb on - strand, within PFLU_RS21030 at 4727.376 kb on - strand, within PFLU_RS21030 at 4727.419 kb on - strand, within PFLU_RS21030 at 4727.432 kb on + strand, within PFLU_RS21030 at 4727.465 kb on + strand, within PFLU_RS21030 at 4727.465 kb on + strand, within PFLU_RS21030 at 4727.465 kb on + strand, within PFLU_RS21030 at 4727.465 kb on + strand, within PFLU_RS21030 at 4727.465 kb on + strand, within PFLU_RS21030 at 4727.466 kb on - strand, within PFLU_RS21030 at 4727.466 kb on - strand, within PFLU_RS21030 at 4727.466 kb on - strand, within PFLU_RS21030 at 4727.466 kb on - strand, within PFLU_RS21030 at 4727.466 kb on - strand, within PFLU_RS21030 at 4727.466 kb on - strand, within PFLU_RS21030 at 4727.801 kb on + strand, within PFLU_RS21030 at 4727.802 kb on - strand, within PFLU_RS21030 at 4727.936 kb on + strand, within PFLU_RS21030 at 4727.937 kb on - strand, within PFLU_RS21030 at 4727.937 kb on - strand, within PFLU_RS21030 at 4727.963 kb on - strand at 4727.978 kb on - strand at 4728.013 kb on + strand at 4728.013 kb on + strand at 4728.014 kb on - strand at 4728.014 kb on - strand at 4728.017 kb on + strand at 4728.017 kb on + strand at 4728.017 kb on + strand at 4728.017 kb on + strand at 4728.017 kb on + strand at 4728.017 kb on + strand at 4728.017 kb on + strand at 4728.017 kb on + strand at 4728.017 kb on + strand at 4728.017 kb on + strand at 4728.018 kb on - strand at 4728.018 kb on - strand at 4728.018 kb on - strand at 4728.018 kb on - strand at 4728.026 kb on + strand at 4728.026 kb on + strand at 4728.027 kb on - strand at 4728.027 kb on - strand at 4728.033 kb on + strand at 4728.033 kb on + strand at 4728.033 kb on + strand at 4728.077 kb on + strand at 4728.077 kb on + strand at 4728.078 kb on - strand at 4728.078 kb on - strand at 4728.078 kb on - strand at 4728.078 kb on - strand at 4728.121 kb on - strand at 4728.138 kb on - strand at 4728.159 kb on + strand at 4728.160 kb on - strand at 4728.160 kb on - strand at 4728.160 kb on - strand at 4728.160 kb on - strand at 4728.160 kb on - strand at 4728.178 kb on + strand at 4728.178 kb on + strand at 4728.179 kb on - strand at 4728.179 kb on - strand at 4728.241 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 4,725,082 - PFLU_RS21020 0.46 +0.7 4,725,533 + PFLU_RS21020 0.84 +0.2 4,725,574 + PFLU_RS21020 0.87 +1.2 4,725,574 + PFLU_RS21020 0.87 -0.2 4,725,575 - PFLU_RS21020 0.87 -0.3 4,725,777 + -1.7 4,725,779 + +0.0 4,725,796 - -1.2 4,725,796 - +0.0 4,725,952 + +0.2 4,725,952 + +1.3 4,725,953 - -1.6 4,725,953 - +0.2 4,725,969 + +1.2 4,725,969 + +1.2 4,725,969 + +0.9 4,725,970 - -0.1 4,725,970 - +0.5 4,725,999 - -1.2 4,726,233 + PFLU_RS21025 0.18 +0.5 4,726,234 - PFLU_RS21025 0.18 -1.8 4,726,338 + PFLU_RS21025 0.26 -1.5 4,726,338 + PFLU_RS21025 0.26 -0.5 4,726,338 + PFLU_RS21025 0.26 +0.2 4,726,338 + PFLU_RS21025 0.26 -1.0 4,726,338 + PFLU_RS21025 0.26 -0.2 4,726,338 + PFLU_RS21025 0.26 -1.2 4,726,338 + PFLU_RS21025 0.26 +0.2 4,726,338 + PFLU_RS21025 0.26 -0.3 4,726,338 + PFLU_RS21025 0.26 -0.8 4,726,338 + PFLU_RS21025 0.26 +1.1 4,726,338 + PFLU_RS21025 0.26 +0.0 4,726,338 + PFLU_RS21025 0.26 -0.3 4,726,338 + PFLU_RS21025 0.26 +0.2 4,726,338 + PFLU_RS21025 0.26 +0.2 4,726,339 - PFLU_RS21025 0.26 -1.4 4,726,339 - PFLU_RS21025 0.26 -1.0 4,726,339 - PFLU_RS21025 0.26 -1.6 4,726,339 - PFLU_RS21025 0.26 -0.9 4,726,339 - PFLU_RS21025 0.26 +0.8 4,726,339 - PFLU_RS21025 0.26 +0.1 4,726,339 - PFLU_RS21025 0.26 +1.2 4,726,339 - PFLU_RS21025 0.26 +0.8 4,726,339 - PFLU_RS21025 0.26 -1.0 4,726,339 - PFLU_RS21025 0.26 -0.7 4,726,339 - PFLU_RS21025 0.26 -0.1 4,726,339 - PFLU_RS21025 0.26 -1.2 4,726,339 - PFLU_RS21025 0.26 -3.4 4,726,339 - PFLU_RS21025 0.26 -1.0 4,726,339 - PFLU_RS21025 0.26 -0.9 4,726,656 + PFLU_RS21025 0.51 +0.6 4,726,656 + PFLU_RS21025 0.51 +0.8 4,726,656 + PFLU_RS21025 0.51 -0.8 4,726,786 - PFLU_RS21025 0.62 +1.3 4,726,932 + PFLU_RS21025 0.73 -1.8 4,727,188 - -0.8 4,727,188 - +1.4 4,727,188 - +0.1 4,727,189 + +0.5 4,727,189 + +0.5 4,727,300 + -1.2 4,727,300 + +0.4 4,727,300 + +0.0 4,727,345 + PFLU_RS21030 0.15 +1.3 4,727,345 + PFLU_RS21030 0.15 +1.0 4,727,345 + PFLU_RS21030 0.15 +0.8 4,727,346 - PFLU_RS21030 0.15 -1.9 4,727,346 - PFLU_RS21030 0.15 -1.1 4,727,376 - PFLU_RS21030 0.19 -0.6 4,727,376 - PFLU_RS21030 0.19 -3.1 4,727,419 - PFLU_RS21030 0.24 -0.6 4,727,432 + PFLU_RS21030 0.26 +0.2 4,727,465 + PFLU_RS21030 0.30 -0.5 4,727,465 + PFLU_RS21030 0.30 +2.2 4,727,465 + PFLU_RS21030 0.30 +0.3 4,727,465 + PFLU_RS21030 0.30 +0.3 4,727,465 + PFLU_RS21030 0.30 -1.8 4,727,466 - PFLU_RS21030 0.30 +0.4 4,727,466 - PFLU_RS21030 0.30 -1.8 4,727,466 - PFLU_RS21030 0.30 +0.2 4,727,466 - PFLU_RS21030 0.30 +0.6 4,727,466 - PFLU_RS21030 0.30 -1.1 4,727,466 - PFLU_RS21030 0.30 +1.0 4,727,801 + PFLU_RS21030 0.72 +0.2 4,727,802 - PFLU_RS21030 0.72 -0.5 4,727,936 + PFLU_RS21030 0.89 +0.5 4,727,937 - PFLU_RS21030 0.89 +0.4 4,727,937 - PFLU_RS21030 0.89 +1.0 4,727,963 - -1.1 4,727,978 - +1.1 4,728,013 + +0.0 4,728,013 + -1.1 4,728,014 - -0.8 4,728,014 - +0.4 4,728,017 + +0.7 4,728,017 + +0.8 4,728,017 + -0.3 4,728,017 + +0.2 4,728,017 + -0.6 4,728,017 + -0.0 4,728,017 + +0.5 4,728,017 + +0.4 4,728,017 + +1.0 4,728,017 + -1.0 4,728,018 - -1.0 4,728,018 - +1.5 4,728,018 - -2.0 4,728,018 - -0.3 4,728,026 + +0.2 4,728,026 + -0.2 4,728,027 - +1.0 4,728,027 - +0.2 4,728,033 + -1.5 4,728,033 + -0.6 4,728,033 + +0.1 4,728,077 + -0.5 4,728,077 + +1.6 4,728,078 - -1.8 4,728,078 - -1.5 4,728,078 - +0.8 4,728,078 - +1.2 4,728,121 - +0.4 4,728,138 - +2.6 4,728,159 + -1.5 4,728,160 - +1.0 4,728,160 - -0.6 4,728,160 - +1.3 4,728,160 - +0.2 4,728,160 - +0.1 4,728,178 + +1.7 4,728,178 + -1.5 4,728,179 - -0.8 4,728,179 - -2.9 4,728,241 - -1.6
Or see this region's nucleotide sequence