Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS14385

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
3,223,169	+				+1.1
3,223,197	+				-2.9
3,223,197	+				-1.2
3,223,197	+				-0.1
3,223,197	+				-2.1
3,223,197	+				-0.4
3,223,197	+				+0.5
3,223,198	-				+0.3
3,223,198	-				-0.5
3,223,201	+				+0.4
3,223,202	-				+0.7
3,223,202	-				+0.3
3,223,202	-				-0.9
3,223,202	-				-0.5
3,223,244	-				-0.2
3,223,244	-				+1.4
3,223,244	-				-2.2
3,223,252	+				-0.4
3,223,274	+				-0.5
3,223,340	-				-1.7
3,223,340	-				+0.4
3,223,340	-				-3.9
3,223,340	-				+0.6
3,223,406	+				+0.1
3,223,406	+				+0.9
3,223,406	+				+0.7
3,223,406	+				+0.1
3,223,406	+				+0.4
3,223,406	+				-0.3
3,223,406	+				-1.2
3,223,406	+				-1.7
3,223,406	+				+0.0
3,223,407	-				+3.7
3,223,407	-				+0.8
3,223,407	-				+0.6
3,223,407	-				+0.5
3,223,407	-				-1.2
3,223,407	-				+0.3
3,223,444	+				-1.5
3,223,549	+		PFLU_RS14380	0.18	+1.1
3,223,549	+		PFLU_RS14380	0.18	+1.8
3,223,550	-		PFLU_RS14380	0.18	-0.9
3,223,550	-		PFLU_RS14380	0.18	+0.8
3,223,550	-		PFLU_RS14380	0.18	+1.5
3,223,550	-		PFLU_RS14380	0.18	-0.5
3,223,550	-		PFLU_RS14380	0.18	+0.5
3,223,561	+		PFLU_RS14380	0.21	+0.5
3,223,692	+		PFLU_RS14380	0.61	+0.4
3,223,692	+		PFLU_RS14380	0.61	-2.4
3,223,692	+		PFLU_RS14380	0.61	+1.2
3,223,692	+		PFLU_RS14380	0.61	+0.1
3,223,692	+		PFLU_RS14380	0.61	+2.0
3,223,692	+		PFLU_RS14380	0.61	+1.9
3,223,693	-		PFLU_RS14380	0.62	-2.2
3,223,693	-		PFLU_RS14380	0.62	-0.9
3,223,718	+		PFLU_RS14380	0.69	-2.4
3,223,718	+		PFLU_RS14380	0.69	+0.6
3,223,722	+		PFLU_RS14380	0.71	-2.8
3,223,723	-		PFLU_RS14380	0.71	-0.1
3,223,723	-		PFLU_RS14380	0.71	-0.9
3,223,723	-		PFLU_RS14380	0.71	+0.7
3,223,723	-		PFLU_RS14380	0.71	-0.5
3,223,854	-				+0.1
3,223,859	-				-1.0
3,223,859	-				+0.2
3,223,859	-				-2.2
3,223,859	-				+0.2
3,223,892	+				+1.7
3,223,893	-				+0.4
3,223,893	-				+0.9
3,223,918	+				-0.1
3,223,919	-				-0.6
3,223,919	-				-1.2
3,223,958	+				+0.2
3,223,959	-				-0.4
3,223,959	-				-0.5
3,223,959	-				+0.1
3,223,959	-				-0.5
3,223,959	-				+0.3
3,224,023	+				+1.5
3,224,023	+				+1.3
3,224,024	-				-1.8
3,224,024	-				+0.1
3,224,024	-				+1.2
3,224,024	-				-3.1
3,224,067	+				-0.6
3,224,067	+				-0.5
3,224,067	+				+1.6
3,224,068	-				+1.5
3,224,068	-				+0.7
3,224,068	-				+1.6
3,224,069	+				-0.1
3,224,069	+				-2.7
3,224,069	+				+1.4
3,224,069	+				-1.7
3,224,069	+				+0.9
3,224,070	-				-0.3
3,224,070	-				+0.3
3,224,070	-				-0.5
3,224,070	-				+1.4
3,224,070	-				+2.4
3,224,070	-				-2.1
3,224,070	-				+0.4
3,224,070	-				+0.4
3,224,134	-				-0.5
3,224,137	-				-1.2
3,224,148	+				+1.4
3,224,148	+				+1.2
3,224,148	+				+1.1
3,224,192	+		PFLU_RS14385	0.21	+0.2
3,224,192	+		PFLU_RS14385	0.21	+0.1
3,224,193	-		PFLU_RS14385	0.21	+0.5
3,224,259	+		PFLU_RS14385	0.40	-1.5
3,224,324	+		PFLU_RS14385	0.59	+0.8
3,224,324	+		PFLU_RS14385	0.59	+0.2
3,224,324	+		PFLU_RS14385	0.59	+0.8
3,224,324	+		PFLU_RS14385	0.59	-0.9
3,224,324	+		PFLU_RS14385	0.59	-0.2
3,224,324	+		PFLU_RS14385	0.59	+0.5
3,224,324	+		PFLU_RS14385	0.59	+0.6
3,224,325	-		PFLU_RS14385	0.59	+1.1
3,224,325	-		PFLU_RS14385	0.59	+1.1
3,224,325	-		PFLU_RS14385	0.59	-1.5
3,224,325	-		PFLU_RS14385	0.59	+1.9
3,224,439	+				+0.1
3,224,465	-				+0.3
3,224,490	-				-1.0
3,224,490	-				-1.0
3,224,490	-				+0.5
3,224,503	+				+0.5
3,224,503	+				+2.2
3,224,520	+				-0.4
3,224,520	+				-2.4
3,224,520	+				-0.1
3,224,553	+				+1.3
3,224,553	+				-0.6
3,224,578	+				-0.4
3,224,578	+				+0.1
3,224,579	-				+1.0
3,224,579	-				-1.1
3,224,582	+				-1.6
3,224,582	+				-0.2
3,224,582	+				-1.8
3,224,582	+				-1.8
3,224,582	+				+1.2
3,224,583	-				-2.1
3,224,583	-				-1.4
3,224,700	+				+1.1
3,224,700	+				+0.3
3,224,700	+				+0.4
3,224,701	-				-0.2
3,224,701	-				+0.4
3,224,701	-				-1.1
3,224,711	-				-0.0
3,224,719	+				-1.5
3,224,719	+				+0.0
3,224,720	-				+0.7
3,224,807	+				+1.4
3,224,807	+				-1.2
3,224,807	+				-0.5
3,224,807	+				+0.6
3,224,807	+				-0.1
3,224,807	+				+0.1
3,224,807	+				-0.6
3,224,807	+				-0.7
3,224,808	-				+0.9
3,224,808	-				-0.3
3,224,808	-				-2.2
3,224,808	-				-3.5
3,224,808	-				+1.1
3,224,808	-				+0.5
3,224,858	+				-0.6
3,224,859	-				-2.8
3,224,859	-				-1.5
3,225,020	+		PFLU_RS14390	0.58	-2.4
3,225,020	+		PFLU_RS14390	0.58	-1.7
3,225,020	+		PFLU_RS14390	0.58	+0.1
3,225,020	+		PFLU_RS14390	0.58	-1.2
3,225,020	+		PFLU_RS14390	0.58	-0.3
3,225,020	+		PFLU_RS14390	0.58	+0.7
3,225,021	-		PFLU_RS14390	0.58	-1.2
3,225,021	-		PFLU_RS14390	0.58	-2.4
3,225,021	-		PFLU_RS14390	0.58	+0.4
3,225,106	+		PFLU_RS14390	0.88	+1.7
3,225,107	-		PFLU_RS14390	0.89	+0.1
3,225,140	+				-1.7
3,225,140	+				+1.8
3,225,140	+				+0.6
3,225,140	+				+0.1
3,225,140	+				-0.5
3,225,140	+				+0.5
3,225,140	+				-0.8
3,225,140	+				-2.3
3,225,140	+				-1.0
3,225,140	+				-0.5
3,225,140	+				+2.1
3,225,140	+				+0.8
3,225,140	+				-2.4
3,225,140	+				-1.0
3,225,140	+				+1.3
3,225,140	+				-1.6
3,225,140	+				+1.1
3,225,141	-				+0.1
3,225,141	-				-0.7
3,225,141	-				+1.7
3,225,141	-				-1.6
3,225,141	-				-0.1
3,225,141	-				-1.9
3,225,141	-				-0.5
3,225,141	-				+0.5
3,225,141	-				-0.1
3,225,141	-				-1.5
3,225,141	-				-2.5
3,225,141	-				-2.7
3,225,141	-				+0.5
3,225,141	-				+1.3
3,225,141	-				-0.7
3,225,141	-				+0.7
3,225,141	-				+0.6
3,225,141	-				+0.4
3,225,141	-				-0.1
3,225,141	-				+0.2
3,225,141	-				-0.3
3,225,141	-				-2.1
3,225,351	+				+0.2
3,225,352	-				-0.7