Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS09770

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
2,152,413	+		PFLU_RS09765	0.12	-0.2
2,152,464	-		PFLU_RS09765	0.18	-0.2
2,152,527	+		PFLU_RS09765	0.27	-1.3
2,152,625	-		PFLU_RS09765	0.40	-0.1
2,152,790	+		PFLU_RS09765	0.62	+0.3
2,152,791	-		PFLU_RS09765	0.62	-0.4
2,152,831	-		PFLU_RS09765	0.67	+1.8
2,152,853	-		PFLU_RS09765	0.70	-0.3
2,152,871	+		PFLU_RS09765	0.72	+2.1
2,152,871	+		PFLU_RS09765	0.72	-0.8
2,152,941	-		PFLU_RS09765	0.81	+0.5
2,152,941	-		PFLU_RS09765	0.81	+1.3
2,152,941	-		PFLU_RS09765	0.81	-2.1
2,152,982	+		PFLU_RS09765	0.87	-0.2
2,153,009	-				-1.2
2,153,041	-				-1.1
2,153,041	-				+1.6
2,153,041	-				+1.7
2,153,080	+				-1.9
2,153,103	+				+1.5
2,153,135	-				-0.5
2,153,248	-				+0.6
2,153,248	-				+0.7
2,153,248	-				+0.7
2,153,280	-				+0.7
2,153,280	-				+0.5
2,153,280	-				-0.9
2,153,323	-				-0.9
2,153,335	+				-2.1
2,153,336	-				-0.0
2,153,364	-				-1.5
2,153,364	-				-1.9
2,153,364	-				+0.2
2,153,441	+		PFLU_RS09770	0.15	-2.6
2,153,454	+		PFLU_RS09770	0.17	-1.1
2,153,454	+		PFLU_RS09770	0.17	+2.2
2,153,454	+		PFLU_RS09770	0.17	+0.9
2,153,454	+		PFLU_RS09770	0.17	-1.4
2,153,455	-		PFLU_RS09770	0.17	+0.8
2,153,455	-		PFLU_RS09770	0.17	+0.6
2,153,455	-		PFLU_RS09770	0.17	+0.5
2,153,455	-		PFLU_RS09770	0.17	+2.1
2,153,460	-		PFLU_RS09770	0.17	+0.3
2,153,496	+		PFLU_RS09770	0.23	-0.1
2,153,496	+		PFLU_RS09770	0.23	-0.2
2,153,514	+		PFLU_RS09770	0.26	-0.3
2,153,514	+		PFLU_RS09770	0.26	+1.2
2,153,514	+		PFLU_RS09770	0.26	-1.3
2,153,515	-		PFLU_RS09770	0.26	+1.5
2,153,515	-		PFLU_RS09770	0.26	+0.7
2,153,515	-		PFLU_RS09770	0.26	-1.5
2,153,593	-		PFLU_RS09770	0.38	+0.3
2,153,593	-		PFLU_RS09770	0.38	+1.5
2,153,597	+		PFLU_RS09770	0.38	-0.2
2,153,598	-		PFLU_RS09770	0.39	+0.8
2,153,598	-		PFLU_RS09770	0.39	-0.4
2,153,598	-		PFLU_RS09770	0.39	+0.4
2,153,607	+		PFLU_RS09770	0.40	-0.3
2,153,607	+		PFLU_RS09770	0.40	+0.9
2,153,607	+		PFLU_RS09770	0.40	-0.7
2,153,607	+		PFLU_RS09770	0.40	-0.6
2,153,607	+		PFLU_RS09770	0.40	-0.4
2,153,608	-		PFLU_RS09770	0.40	-1.8
2,153,608	-		PFLU_RS09770	0.40	+0.7
2,153,609	+		PFLU_RS09770	0.40	+0.5
2,153,653	+		PFLU_RS09770	0.47	-1.6
2,153,654	-		PFLU_RS09770	0.47	+1.5
2,153,654	-		PFLU_RS09770	0.47	+0.5
2,153,684	-		PFLU_RS09770	0.52	-1.8
2,153,714	-		PFLU_RS09770	0.56	-2.9
2,153,774	-		PFLU_RS09770	0.65	+2.2
2,153,803	+		PFLU_RS09770	0.70	-2.5
2,153,820	+		PFLU_RS09770	0.72	-2.6
2,153,821	-		PFLU_RS09770	0.73	+1.5
2,153,865	+		PFLU_RS09770	0.79	-0.2
2,153,865	+		PFLU_RS09770	0.79	+1.1
2,153,865	+		PFLU_RS09770	0.79	+1.5
2,153,931	+		PFLU_RS09770	0.89	-2.8
2,153,999	+				+1.6
2,153,999	+				-0.4
2,154,000	-				+1.4
2,154,000	-				-0.6
2,154,001	+				-1.3
2,154,002	-				-0.1
2,154,056	-				+1.1
2,154,091	+				-1.9
2,154,092	-				-2.5
2,154,092	-				+0.4
2,154,093	+				-0.9
2,154,093	+				-0.3
2,154,093	+				+0.1
2,154,094	-				-1.7
2,154,113	-				+1.4
2,154,124	-				+0.2
2,154,277	-		PFLU_RS09775	0.14	+0.8
2,154,280	+		PFLU_RS09775	0.14	-0.7
2,154,280	+		PFLU_RS09775	0.14	-0.3
2,154,290	-		PFLU_RS09775	0.15	-0.2
2,154,290	-		PFLU_RS09775	0.15	+0.5
2,154,298	+		PFLU_RS09775	0.16	+0.7
2,154,299	-		PFLU_RS09775	0.16	-1.5
2,154,299	-		PFLU_RS09775	0.16	-2.4
2,154,361	+		PFLU_RS09775	0.21	-0.4
2,154,375	+		PFLU_RS09775	0.23	-0.9
2,154,375	+		PFLU_RS09775	0.23	-0.2
2,154,415	-		PFLU_RS09775	0.26	+2.0
2,154,525	+		PFLU_RS09775	0.36	+0.7
2,154,526	-		PFLU_RS09775	0.36	-1.7
2,154,526	-		PFLU_RS09775	0.36	-0.2
2,154,571	-		PFLU_RS09775	0.40	-1.1
2,154,572	+		PFLU_RS09775	0.41	-0.0
2,154,572	+		PFLU_RS09775	0.41	-0.5
2,154,664	+		PFLU_RS09775	0.49	+0.5
2,154,664	+		PFLU_RS09775	0.49	+0.2
2,154,664	+		PFLU_RS09775	0.49	+1.0
2,154,664	+		PFLU_RS09775	0.49	-0.4
2,154,664	+		PFLU_RS09775	0.49	-3.0
2,154,664	+		PFLU_RS09775	0.49	+0.5
2,154,665	-		PFLU_RS09775	0.49	+1.3
2,154,665	-		PFLU_RS09775	0.49	-1.6
2,154,665	-		PFLU_RS09775	0.49	+0.4
2,154,665	-		PFLU_RS09775	0.49	-0.4
2,154,665	-		PFLU_RS09775	0.49	-1.5
2,154,665	-		PFLU_RS09775	0.49	+1.6
2,154,665	-		PFLU_RS09775	0.49	+0.0
2,154,665	-		PFLU_RS09775	0.49	+0.8
2,154,665	-		PFLU_RS09775	0.49	+0.4
2,154,665	-		PFLU_RS09775	0.49	+2.1
2,154,665	-		PFLU_RS09775	0.49	+1.1
2,154,665	-		PFLU_RS09775	0.49	+2.2
2,154,665	-		PFLU_RS09775	0.49	-0.1
2,154,693	+		PFLU_RS09775	0.52	+0.3
2,154,693	+		PFLU_RS09775	0.52	-1.3
2,154,725	-		PFLU_RS09775	0.54	+1.2
2,154,763	-		PFLU_RS09775	0.58	-1.0
2,154,763	-		PFLU_RS09775	0.58	-0.9
2,154,795	-		PFLU_RS09775	0.61	-0.5
2,154,809	+		PFLU_RS09775	0.62	-1.7
2,154,810	-		PFLU_RS09775	0.62	-2.0
2,154,812	+		PFLU_RS09775	0.62	+1.0
2,154,812	+		PFLU_RS09775	0.62	-0.5
2,154,813	-		PFLU_RS09775	0.62	+1.0
2,154,813	-		PFLU_RS09775	0.62	-0.6
2,154,813	-		PFLU_RS09775	0.62	-0.7
2,154,813	-		PFLU_RS09775	0.62	+0.5
2,154,841	+		PFLU_RS09775	0.65	-1.3
2,154,841	+		PFLU_RS09775	0.65	-1.2
2,154,842	-		PFLU_RS09775	0.65	+0.5
2,154,842	-		PFLU_RS09775	0.65	+2.4
2,154,979	+		PFLU_RS09775	0.78	+0.6
2,154,979	+		PFLU_RS09775	0.78	+0.5
2,154,987	+		PFLU_RS09775	0.78	-2.5