Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS08910

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
1,972,966	+		PFLU_RS08900	0.80	-0.8
1,972,966	+		PFLU_RS08900	0.80	-1.1
1,972,967	-		PFLU_RS08900	0.80	-1.1
1,973,038	+		PFLU_RS08900	0.85	+0.6
1,973,038	+		PFLU_RS08900	0.85	-1.5
1,973,038	+		PFLU_RS08900	0.85	+0.7
1,973,038	+		PFLU_RS08900	0.85	-0.8
1,973,038	+		PFLU_RS08900	0.85	+1.4
1,973,038	+		PFLU_RS08900	0.85	+0.6
1,973,038	+		PFLU_RS08900	0.85	-0.5
1,973,038	+		PFLU_RS08900	0.85	-0.3
1,973,038	+		PFLU_RS08900	0.85	-0.5
1,973,039	-		PFLU_RS08900	0.85	-2.1
1,973,039	-		PFLU_RS08900	0.85	+0.3
1,973,039	-		PFLU_RS08900	0.85	-1.4
1,973,140	+				-0.3
1,973,140	+				+1.3
1,973,140	+				+0.3
1,973,140	+				-0.5
1,973,140	+				-0.4
1,973,140	+				-0.6
1,973,140	+				+0.7
1,973,141	-				-1.9
1,973,141	-				-0.1
1,973,141	-				-0.2
1,973,141	-				+0.1
1,973,141	-				-0.2
1,973,141	-				+1.2
1,973,233	+				-2.8
1,973,233	+				+0.8
1,973,233	+				-0.4
1,973,234	-				-0.8
1,973,234	-				-1.7
1,973,234	-				-3.9
1,973,256	+				-1.7
1,973,256	+				+1.4
1,973,256	+				-1.3
1,973,273	+				-3.6
1,973,274	-				+0.1
1,973,274	-				+0.5
1,973,288	-				+0.7
1,973,345	+				+0.3
1,973,346	-				+0.6
1,973,348	+				+1.6
1,973,348	+				+0.2
1,973,348	+				+0.0
1,973,348	+				+1.3
1,973,348	+				+1.1
1,973,348	+				-0.8
1,973,348	+				+1.3
1,973,348	+				-1.5
1,973,348	+				+0.2
1,973,348	+				+0.5
1,973,348	+				-1.8
1,973,349	-				+0.9
1,973,349	-				+0.0
1,973,349	-				-1.4
1,973,349	-				-0.3
1,973,349	-				+1.8
1,973,349	-				-1.8
1,973,349	-				+0.1
1,973,349	-				-0.4
1,973,349	-				+0.1
1,973,349	-				-2.1
1,973,349	-				-0.5
1,973,349	-				+1.0
1,973,349	-				+1.0
1,973,349	-				+1.7
1,973,349	-				-2.5
1,973,349	-				+1.1
1,973,352	-				+2.3
1,973,362	+				+0.6
1,973,378	+				+1.1
1,973,378	+				-0.2
1,973,378	+				-0.8
1,973,378	+				+0.2
1,973,379	-				+0.5
1,973,379	-				+0.5
1,973,379	-				-0.1
1,973,379	-				+0.2
1,973,379	-				+0.6
1,973,379	-				-2.0
1,973,379	-				+0.7
1,973,379	-				-0.6
1,973,389	+				-1.7
1,973,389	+				+0.3
1,973,389	+				+0.2
1,973,389	+				-2.5
1,973,389	+				+0.6
1,973,389	+				+1.2
1,973,389	+				+1.8
1,973,390	-				+0.2
1,973,390	-				-0.7
1,973,390	-				-2.3
1,973,390	-				-0.2
1,973,390	-				-0.6
1,973,390	-				-0.2
1,973,390	-				-0.8
1,973,390	-				-0.9
1,973,390	-				+0.1
1,973,397	+				+1.8
1,973,397	+				-2.4
1,973,397	+				+0.3
1,973,397	+				+2.1
1,973,397	+				-1.0
1,973,397	+				+0.8
1,973,397	+				+0.1
1,973,397	+				-1.1
1,973,397	+				-0.8
1,973,398	-				+0.5
1,973,398	-				-1.0
1,973,399	+				-0.2
1,973,400	-				-0.2
1,973,400	-				-1.4
1,973,400	-				+0.2
1,973,400	-				-0.5
1,973,400	-				-0.4
1,973,411	+				+0.1
1,973,412	-				+0.0
1,973,429	+				+0.2
1,973,429	+				+1.0
1,973,529	-		PFLU_RS08905	0.17	+1.3
1,973,541	-		PFLU_RS08905	0.21	+0.4
1,973,548	+		PFLU_RS08905	0.22	-0.4
1,973,548	+		PFLU_RS08905	0.22	-0.7
1,973,548	+		PFLU_RS08905	0.22	+1.8
1,973,759	+		PFLU_RS08905	0.80	+0.9
1,973,759	+		PFLU_RS08905	0.80	+0.5
1,973,759	+		PFLU_RS08905	0.80	-0.2
1,973,759	+		PFLU_RS08905	0.80	+1.3
1,973,759	+		PFLU_RS08905	0.80	-0.7
1,973,759	+		PFLU_RS08905	0.80	-1.4
1,973,760	-		PFLU_RS08905	0.80	+0.7
1,973,760	-		PFLU_RS08905	0.80	+1.5
1,973,760	-		PFLU_RS08905	0.80	+1.5
1,973,760	-		PFLU_RS08905	0.80	-1.3
1,973,917	-				-0.2
1,974,015	+				+1.0
1,974,015	+				-1.3
1,974,016	-				+1.1
1,974,016	-				+0.6
1,974,046	+				+0.1
1,974,047	-				-0.3
1,974,099	+		PFLU_RS08910	0.12	-0.0
1,974,099	+		PFLU_RS08910	0.12	-0.7
1,974,100	-		PFLU_RS08910	0.12	-0.1
1,974,100	-		PFLU_RS08910	0.12	-0.4
1,974,100	-		PFLU_RS08910	0.12	-0.8
1,974,100	-		PFLU_RS08910	0.12	+0.4
1,974,116	+		PFLU_RS08910	0.13	+1.0
1,974,116	+		PFLU_RS08910	0.13	-0.0
1,974,117	-		PFLU_RS08910	0.13	-0.9
1,974,443	+		PFLU_RS08910	0.34	-1.2
1,974,443	+		PFLU_RS08910	0.34	-1.0
1,974,444	-		PFLU_RS08910	0.34	+0.7
1,974,642	+		PFLU_RS08910	0.47	+0.5
1,974,642	+		PFLU_RS08910	0.47	-1.0
1,974,642	+		PFLU_RS08910	0.47	+0.9
1,974,642	+		PFLU_RS08910	0.47	-1.1
1,974,642	+		PFLU_RS08910	0.47	-0.9
1,974,643	-		PFLU_RS08910	0.47	-0.0
1,974,643	-		PFLU_RS08910	0.47	-1.0
1,974,643	-		PFLU_RS08910	0.47	+0.2
1,974,643	-		PFLU_RS08910	0.47	+0.4
1,974,815	+		PFLU_RS08910	0.58	+0.7
1,974,815	+		PFLU_RS08910	0.58	-1.1
1,974,815	+		PFLU_RS08910	0.58	-0.3
1,974,815	+		PFLU_RS08910	0.58	-0.4
1,974,815	+		PFLU_RS08910	0.58	+0.5
1,974,815	+		PFLU_RS08910	0.58	-3.1
1,974,815	+		PFLU_RS08910	0.58	-2.5
1,974,815	+		PFLU_RS08910	0.58	-0.4
1,974,816	-		PFLU_RS08910	0.58	+2.2
1,974,816	-		PFLU_RS08910	0.58	+0.2
1,974,816	-		PFLU_RS08910	0.58	+1.5
1,974,816	-		PFLU_RS08910	0.58	+2.3
1,974,816	-		PFLU_RS08910	0.58	-0.4
1,974,816	-		PFLU_RS08910	0.58	+0.8
1,974,816	-		PFLU_RS08910	0.58	+0.9
1,974,816	-		PFLU_RS08910	0.58	-0.8
1,974,862	-		PFLU_RS08910	0.61	+0.7
1,974,942	+		PFLU_RS08910	0.66	-0.5
1,974,943	-		PFLU_RS08910	0.66	-2.6
1,974,943	-		PFLU_RS08910	0.66	+2.2
1,975,203	+		PFLU_RS08910	0.83	-0.9
1,975,203	+		PFLU_RS08910	0.83	-0.5
1,975,203	+		PFLU_RS08910	0.83	-0.1
1,975,204	-		PFLU_RS08910	0.83	+0.3
1,975,317	+				+0.5
1,975,364	+				-0.8
1,975,387	-				-0.9
1,975,393	-				-0.2
1,975,434	+				-2.7
1,975,434	+				+1.9
1,975,477	+				-1.1
1,975,477	+				+0.5
1,975,478	-				-0.3
1,975,478	-				-1.6
1,975,582	+				+0.6
1,975,582	+				-2.5
1,975,601	+				+0.6
1,975,601	+				-1.3
1,975,601	+				+0.2
1,975,602	-				-0.9
1,975,602	-				-0.6
1,975,602	-				-0.3
1,975,602	-				+0.2
1,975,683	+				-0.1
1,975,683	+				-0.3
1,975,683	+				-0.4
1,975,683	+				-2.2
1,975,702	+				+1.2
1,975,703	-				+1.2
1,975,703	-				-0.0
1,975,703	-				-0.1
1,975,703	-				+0.5
1,975,743	+				+0.5
1,975,743	+				-0.7
1,975,743	+				-0.1
1,975,743	+				-0.7
1,975,743	+				-0.7
1,975,743	+				+0.9
1,975,743	+				+1.4
1,975,743	+				+1.3
1,975,743	+				-1.0
1,975,743	+				-0.9
1,975,743	+				-0.3
1,975,743	+				+0.5
1,975,743	+				-2.2
1,975,743	+				-1.0
1,975,743	+				-1.5
1,975,743	+				-0.9
1,975,743	+				-2.6
1,975,743	+				+2.4
1,975,743	+				+1.3
1,975,744	-				+0.1
1,975,744	-				-1.7
1,975,744	-				-0.1
1,975,744	-				+0.4
1,975,744	-				+1.2
1,975,744	-				+0.6
1,975,744	-				-0.4
1,975,744	-				-0.9
1,975,744	-				-0.7
1,975,744	-				-0.3
1,975,744	-				-1.3
1,975,744	-				+0.2
1,975,744	-				-0.4
1,975,744	-				-1.0
1,975,744	-				-0.3
1,975,797	+				+2.1
1,975,797	+				-2.2
1,975,797	+				+0.5
1,975,797	+				+1.9
1,975,797	+				+1.0
1,975,797	+				+1.1
1,975,798	-				+1.4
1,975,798	-				+0.6
1,975,798	-				-0.0
1,975,798	-				-0.3
1,975,798	-				-1.1
1,975,798	-				-0.2
1,975,798	-				+1.6
1,975,798	-				+0.8
1,975,798	-				-0.9
1,975,798	-				-0.9
1,975,798	-				+1.0
1,975,841	+				+0.9
1,975,841	+				-0.5
1,975,841	+				-0.2
1,975,842	-				+0.4
1,975,842	-				-0.4
1,975,842	-				-0.4
1,975,898	-		PFLU_RS08915	0.11	+1.8
1,975,969	+		PFLU_RS08915	0.20	+1.2
1,975,969	+		PFLU_RS08915	0.20	+1.2
1,976,078	-		PFLU_RS08915	0.33	-0.1
1,976,119	-		PFLU_RS08915	0.37	+0.0
1,976,158	+		PFLU_RS08915	0.42	+0.4
1,976,158	+		PFLU_RS08915	0.42	-2.3
1,976,158	+		PFLU_RS08915	0.42	-1.2
1,976,159	-		PFLU_RS08915	0.42	+1.6
1,976,159	-		PFLU_RS08915	0.42	-2.9
1,976,159	-		PFLU_RS08915	0.42	+0.8
1,976,287	+		PFLU_RS08915	0.57	+0.2
1,976,287	+		PFLU_RS08915	0.57	-0.7
1,976,287	+		PFLU_RS08915	0.57	-0.7
1,976,287	+		PFLU_RS08915	0.57	+1.2
1,976,287	+		PFLU_RS08915	0.57	+0.8
1,976,287	+		PFLU_RS08915	0.57	+0.2
1,976,287	+		PFLU_RS08915	0.57	-0.5
1,976,288	-		PFLU_RS08915	0.57	-0.3
1,976,288	-		PFLU_RS08915	0.57	-0.7
1,976,288	-		PFLU_RS08915	0.57	+0.6
1,976,288	-		PFLU_RS08915	0.57	-0.4
1,976,288	-		PFLU_RS08915	0.57	-1.1
1,976,437	+		PFLU_RS08915	0.75	+0.8
1,976,437	+		PFLU_RS08915	0.75	+1.1
1,976,437	+		PFLU_RS08915	0.75	+0.6
1,976,437	+		PFLU_RS08915	0.75	-0.3
1,976,437	+		PFLU_RS08915	0.75	-2.7
1,976,437	+		PFLU_RS08915	0.75	-0.8
1,976,437	+		PFLU_RS08915	0.75	+1.0
1,976,437	+		PFLU_RS08915	0.75	+0.6
1,976,438	-		PFLU_RS08915	0.75	-0.4
1,976,438	-		PFLU_RS08915	0.75	+1.1
1,976,438	-		PFLU_RS08915	0.75	+1.0
1,976,438	-		PFLU_RS08915	0.75	+0.4
1,976,438	-		PFLU_RS08915	0.75	+2.6
1,976,438	-		PFLU_RS08915	0.75	-1.6
1,976,438	-		PFLU_RS08915	0.75	+1.4
1,976,438	-		PFLU_RS08915	0.75	+4.0
1,976,438	-		PFLU_RS08915	0.75	+1.7
1,976,438	-		PFLU_RS08915	0.75	-2.4
1,976,438	-		PFLU_RS08915	0.75	+2.8
1,976,438	-		PFLU_RS08915	0.75	+0.7
1,976,438	-		PFLU_RS08915	0.75	+1.0