Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS08210

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
1,834,205	+		PFLU_RS08200	0.75	-1.1
1,834,206	-		PFLU_RS08200	0.75	-1.7
1,834,206	-		PFLU_RS08200	0.75	-0.5
1,834,206	-		PFLU_RS08200	0.75	+0.7
1,834,206	-		PFLU_RS08200	0.75	-1.3
1,834,396	+				-0.8
1,834,396	+				+2.7
1,834,396	+				+0.7
1,834,397	-				-0.7
1,834,397	-				+1.1
1,834,397	-				-0.3
1,834,397	-				-0.7
1,834,397	-				-0.5
1,834,397	-				+1.1
1,834,397	-				+0.5
1,834,439	+				+0.7
1,834,440	-				-0.8
1,834,445	+				+0.3
1,834,475	+				+0.6
1,834,475	+				+0.1
1,834,594	+		PFLU_RS08205	0.18	-0.4
1,834,594	+		PFLU_RS08205	0.18	+0.8
1,834,594	+		PFLU_RS08205	0.18	-0.3
1,834,594	+		PFLU_RS08205	0.18	+1.2
1,834,595	-		PFLU_RS08205	0.18	-0.1
1,834,595	-		PFLU_RS08205	0.18	+0.3
1,834,595	-		PFLU_RS08205	0.18	-0.1
1,834,595	-		PFLU_RS08205	0.18	+0.9
1,834,595	-		PFLU_RS08205	0.18	+0.5
1,834,596	+		PFLU_RS08205	0.18	+0.7
1,834,611	+		PFLU_RS08205	0.20	+0.3
1,834,612	-		PFLU_RS08205	0.20	-0.5
1,834,612	-		PFLU_RS08205	0.20	+0.3
1,834,660	+		PFLU_RS08205	0.28	+0.9
1,834,660	+		PFLU_RS08205	0.28	-0.5
1,834,660	+		PFLU_RS08205	0.28	+0.1
1,834,661	-		PFLU_RS08205	0.28	-1.7
1,834,672	-		PFLU_RS08205	0.30	+0.7
1,834,679	+		PFLU_RS08205	0.31	-0.0
1,834,679	+		PFLU_RS08205	0.31	-1.5
1,834,680	-		PFLU_RS08205	0.31	+0.9
1,834,718	+		PFLU_RS08205	0.37	-0.9
1,834,718	+		PFLU_RS08205	0.37	-0.1
1,834,718	+		PFLU_RS08205	0.37	+1.2
1,834,719	-		PFLU_RS08205	0.37	+1.1
1,834,719	-		PFLU_RS08205	0.37	+0.8
1,834,719	-		PFLU_RS08205	0.37	+0.2
1,834,719	-		PFLU_RS08205	0.37	-0.3
1,834,719	-		PFLU_RS08205	0.37	-1.1
1,834,719	-		PFLU_RS08205	0.37	+0.0
1,834,719	-		PFLU_RS08205	0.37	-0.5
1,834,724	+		PFLU_RS08205	0.38	+1.2
1,834,724	+		PFLU_RS08205	0.38	+0.5
1,834,724	+		PFLU_RS08205	0.38	+0.8
1,834,724	+		PFLU_RS08205	0.38	-0.9
1,834,724	+		PFLU_RS08205	0.38	+0.7
1,834,724	+		PFLU_RS08205	0.38	+1.5
1,834,725	-		PFLU_RS08205	0.38	+1.0
1,834,727	+		PFLU_RS08205	0.38	+1.6
1,834,727	+		PFLU_RS08205	0.38	-0.4
1,834,727	+		PFLU_RS08205	0.38	-2.4
1,834,727	+		PFLU_RS08205	0.38	-0.3
1,834,727	+		PFLU_RS08205	0.38	+0.1
1,834,728	-		PFLU_RS08205	0.38	+1.2
1,834,728	-		PFLU_RS08205	0.38	-0.5
1,834,728	-		PFLU_RS08205	0.38	-1.0
1,834,728	-		PFLU_RS08205	0.38	-0.9
1,834,728	-		PFLU_RS08205	0.38	+1.6
1,834,863	+		PFLU_RS08205	0.59	+0.4
1,834,863	+		PFLU_RS08205	0.59	+1.5
1,834,863	+		PFLU_RS08205	0.59	-1.1
1,834,864	-		PFLU_RS08205	0.60	+0.5
1,834,864	-		PFLU_RS08205	0.60	+0.0
1,835,020	+		PFLU_RS08205	0.84	+1.7
1,835,020	+		PFLU_RS08205	0.84	-0.8
1,835,020	+		PFLU_RS08205	0.84	+2.1
1,835,020	+		PFLU_RS08205	0.84	-1.8
1,835,020	+		PFLU_RS08205	0.84	+0.7
1,835,021	-		PFLU_RS08205	0.84	+1.2
1,835,021	-		PFLU_RS08205	0.84	+1.0
1,835,021	-		PFLU_RS08205	0.84	+1.3
1,835,021	-		PFLU_RS08205	0.84	+1.8
1,835,074	+				+0.4
1,835,075	-				-1.9
1,835,075	-				+1.1
1,835,112	+				+1.0
1,835,112	+				+1.1
1,835,113	-				+0.0
1,835,139	+				-0.7
1,835,139	+				+0.3
1,835,139	+				-0.2
1,835,139	+				+0.9
1,835,139	+				+1.6
1,835,139	+				-0.3
1,835,139	+				-2.5
1,835,139	+				+0.1
1,835,139	+				+0.4
1,835,139	+				-1.3
1,835,139	+				-2.7
1,835,140	-				-0.1
1,835,140	-				+0.2
1,835,140	-				+1.0
1,835,140	-				+1.5
1,835,140	-				+0.7
1,835,143	+				-3.0
1,835,143	+				+0.9
1,835,143	+				-0.5
1,835,144	-				+0.0
1,835,144	-				-1.5
1,835,144	-				-1.0
1,835,144	-				+1.3
1,835,144	-				+1.5
1,835,144	-				+0.5
1,835,144	-				+1.4
1,835,144	-				-0.4
1,835,144	-				+1.3
1,835,144	-				+0.8
1,835,164	+				-0.2
1,835,209	+				-0.0
1,835,209	+				-0.5
1,835,209	+				-1.1
1,835,210	-				+1.0
1,835,352	+		PFLU_RS08210	0.25	+0.1
1,835,352	+		PFLU_RS08210	0.25	+0.5
1,835,352	+		PFLU_RS08210	0.25	-0.5
1,835,353	-		PFLU_RS08210	0.25	+1.1
1,835,400	+		PFLU_RS08210	0.31	+1.0
1,835,431	-		PFLU_RS08210	0.34	-2.2
1,835,431	-		PFLU_RS08210	0.34	+0.5
1,835,566	+		PFLU_RS08210	0.50	+1.7
1,835,566	+		PFLU_RS08210	0.50	-1.1
1,835,566	+		PFLU_RS08210	0.50	+1.8
1,835,566	+		PFLU_RS08210	0.50	+0.3
1,835,566	+		PFLU_RS08210	0.50	-0.3
1,835,566	+		PFLU_RS08210	0.50	-0.5
1,835,566	+		PFLU_RS08210	0.50	+1.2
1,835,567	-		PFLU_RS08210	0.50	-1.7
1,835,567	-		PFLU_RS08210	0.50	+0.5
1,835,567	-		PFLU_RS08210	0.50	+2.6
1,835,567	-		PFLU_RS08210	0.50	+1.4
1,835,636	+		PFLU_RS08210	0.58	+0.6
1,835,636	+		PFLU_RS08210	0.58	-0.6
1,835,679	+		PFLU_RS08210	0.63	-0.2
1,835,679	+		PFLU_RS08210	0.63	+0.2
1,835,716	+		PFLU_RS08210	0.68	-0.9
1,835,716	+		PFLU_RS08210	0.68	-0.3
1,835,716	+		PFLU_RS08210	0.68	+0.1
1,835,716	+		PFLU_RS08210	0.68	-0.3
1,835,716	+		PFLU_RS08210	0.68	-0.5
1,835,716	+		PFLU_RS08210	0.68	-0.5
1,835,716	+		PFLU_RS08210	0.68	-0.7
1,835,716	+		PFLU_RS08210	0.68	-0.8
1,835,716	+		PFLU_RS08210	0.68	-1.8
1,835,716	+		PFLU_RS08210	0.68	-0.7
1,835,716	+		PFLU_RS08210	0.68	+0.1
1,835,717	-		PFLU_RS08210	0.68	-1.7
1,835,717	-		PFLU_RS08210	0.68	-0.4
1,835,717	-		PFLU_RS08210	0.68	+0.7
1,835,717	-		PFLU_RS08210	0.68	-0.3
1,835,717	-		PFLU_RS08210	0.68	-0.2
1,835,717	-		PFLU_RS08210	0.68	-2.1
1,835,717	-		PFLU_RS08210	0.68	-0.8
1,835,717	-		PFLU_RS08210	0.68	+2.0
1,835,717	-		PFLU_RS08210	0.68	+1.1
1,835,717	-		PFLU_RS08210	0.68	+0.9
1,835,717	-		PFLU_RS08210	0.68	-0.4
1,835,717	-		PFLU_RS08210	0.68	-0.5
1,835,717	-		PFLU_RS08210	0.68	+0.8
1,835,717	-		PFLU_RS08210	0.68	-0.8
1,835,717	-		PFLU_RS08210	0.68	-3.6
1,835,717	-		PFLU_RS08210	0.68	-2.0
1,835,717	-		PFLU_RS08210	0.68	-1.5
1,835,717	-		PFLU_RS08210	0.68	+1.2
1,835,717	-		PFLU_RS08210	0.68	-1.8
1,835,717	-		PFLU_RS08210	0.68	+1.3
1,835,752	+		PFLU_RS08210	0.72	+0.3
1,835,752	+		PFLU_RS08210	0.72	+0.3
1,835,753	-		PFLU_RS08210	0.72	+0.3
1,835,753	-		PFLU_RS08210	0.72	-0.9
1,835,888	-		PFLU_RS08210	0.88	-0.5
1,835,889	+		PFLU_RS08210	0.88	-0.1
1,835,941	+				-1.3
1,835,941	+				-0.1
1,835,942	-				-1.8
1,835,942	-				-1.1
1,835,942	-				+0.7
1,835,942	-				-0.6
1,835,942	-				-1.5
1,835,942	-				-1.2
1,835,942	-				-0.8
1,835,943	+				+0.8
1,835,943	+				-0.2
1,835,944	-				-0.9
1,835,944	-				-0.3
1,835,944	-				-0.9
1,835,965	-				-0.3
1,835,965	-				+1.8
1,835,965	-				-0.1
1,835,965	-				-0.3
1,835,965	-				-0.3
1,835,986	+				+1.3
1,835,986	+				+0.6
1,835,987	-				+2.1
1,835,995	-				+1.3
1,836,059	+				+0.6
1,836,059	+				+1.2
1,836,059	+				-1.2
1,836,060	-				+1.9
1,836,060	-				-2.9
1,836,060	-				+1.1
1,836,060	-				-0.2
1,836,204	+		PFLU_RS30535	0.84	+1.9
1,836,204	+		PFLU_RS30535	0.84	+0.9
1,836,204	+		PFLU_RS30535	0.84	-2.1
1,836,205	-		PFLU_RS30535	0.85	+0.2
1,836,207	+		PFLU_RS30535	0.86	-0.5
1,836,208	-		PFLU_RS30535	0.86	-0.9
1,836,208	-		PFLU_RS30535	0.86	+0.1
1,836,208	-		PFLU_RS30535	0.86	-2.5
1,836,208	-		PFLU_RS30535	0.86	+0.2
1,836,208	-		PFLU_RS30535	0.86	-0.0
1,836,208	-		PFLU_RS30535	0.86	+0.7
1,836,220	+				+0.9
1,836,220	+				+0.2
1,836,220	+				+1.1
1,836,220	+				+1.3
1,836,220	+				-0.7
1,836,220	+				+0.6
1,836,221	-				-0.9
1,836,221	-				+0.7
1,836,221	-				+1.8
1,836,230	+				-2.2
1,836,231	-				-2.7
1,836,231	-				-1.4
1,836,231	-				-0.8
1,836,231	-				-1.3
1,836,279	-				-0.6
1,836,304	+				+0.3
1,836,305	-				-0.8
1,836,307	+				-0.2
1,836,307	+				-0.3
1,836,307	+				-0.9
1,836,307	+				-0.6
1,836,308	-				+0.0
1,836,308	-				+0.0
1,836,308	-				+0.8
1,836,308	-				+0.5
1,836,308	-				+1.1
1,836,308	-				+0.8
1,836,308	-				+0.5
1,836,317	+				+0.0
1,836,317	+				-2.7
1,836,318	-				+0.4
1,836,335	+				+0.2
1,836,335	+				-0.3
1,836,335	+				-0.1
1,836,335	+				+0.3
1,836,336	-				-1.7
1,836,336	-				+0.6
1,836,336	-				+0.1
1,836,336	-				+0.6
1,836,338	+				+0.2
1,836,338	+				+0.5
1,836,338	+				+0.4
1,836,338	+				+2.2
1,836,338	+				+0.3
1,836,339	-				-1.2
1,836,339	-				+1.0
1,836,339	-				+0.1
1,836,339	-				-0.7
1,836,339	-				-2.2
1,836,339	-				+0.5
1,836,339	-				+1.5
1,836,339	-				+0.4
1,836,407	-				+0.4
1,836,425	+				-0.7
1,836,426	-				-0.8
1,836,566	+		PFLU_RS08215	0.16	-1.5
1,836,566	+		PFLU_RS08215	0.16	-2.3
1,836,566	+		PFLU_RS08215	0.16	+1.7
1,836,567	-		PFLU_RS08215	0.16	+0.1
1,836,567	-		PFLU_RS08215	0.16	-0.4
1,836,601	+		PFLU_RS08215	0.19	-0.7
1,836,601	+		PFLU_RS08215	0.19	-1.3
1,836,601	+		PFLU_RS08215	0.19	+0.8
1,836,601	+		PFLU_RS08215	0.19	+0.3
1,836,601	+		PFLU_RS08215	0.19	+1.0
1,836,601	+		PFLU_RS08215	0.19	-0.0
1,836,601	+		PFLU_RS08215	0.19	-0.3
1,836,601	+		PFLU_RS08215	0.19	+0.4
1,836,601	+		PFLU_RS08215	0.19	+1.7
1,836,601	+		PFLU_RS08215	0.19	+0.7
1,836,601	+		PFLU_RS08215	0.19	+0.8
1,836,601	+		PFLU_RS08215	0.19	+0.2
1,836,601	+		PFLU_RS08215	0.19	-2.7
1,836,601	+		PFLU_RS08215	0.19	+0.0
1,836,601	+		PFLU_RS08215	0.19	-0.3
1,836,601	+		PFLU_RS08215	0.19	-0.2
1,836,601	+		PFLU_RS08215	0.19	-3.3
1,836,601	+		PFLU_RS08215	0.19	+1.0
1,836,601	+		PFLU_RS08215	0.19	-0.3
1,836,602	-		PFLU_RS08215	0.19	-0.7
1,836,602	-		PFLU_RS08215	0.19	-1.4
1,836,602	-		PFLU_RS08215	0.19	+1.4
1,836,602	-		PFLU_RS08215	0.19	-0.5
1,836,602	-		PFLU_RS08215	0.19	-2.0
1,836,602	-		PFLU_RS08215	0.19	+0.1
1,836,602	-		PFLU_RS08215	0.19	-1.1
1,836,602	-		PFLU_RS08215	0.19	+0.6
1,836,602	-		PFLU_RS08215	0.19	-2.1
1,836,602	-		PFLU_RS08215	0.19	+0.9
1,836,602	-		PFLU_RS08215	0.19	-0.4
1,836,602	-		PFLU_RS08215	0.19	-0.6
1,836,602	-		PFLU_RS08215	0.19	-0.7
1,836,602	-		PFLU_RS08215	0.19	-2.3
1,836,602	-		PFLU_RS08215	0.19	+0.7
1,836,602	-		PFLU_RS08215	0.19	+1.0
1,836,685	+		PFLU_RS08215	0.25	+2.0
1,836,685	+		PFLU_RS08215	0.25	-1.9
1,836,686	-		PFLU_RS08215	0.25	+0.5