Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS05785

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
1,304,180	-		PFLU_RS05780	0.57	+2.1
1,304,230	+		PFLU_RS05780	0.64	-0.2
1,304,230	+		PFLU_RS05780	0.64	-1.9
1,304,230	+		PFLU_RS05780	0.64	-0.7
1,304,230	+		PFLU_RS05780	0.64	+0.8
1,304,230	+		PFLU_RS05780	0.64	-0.2
1,304,230	+		PFLU_RS05780	0.64	+0.7
1,304,230	+		PFLU_RS05780	0.64	-0.2
1,304,230	+		PFLU_RS05780	0.64	+0.1
1,304,230	+		PFLU_RS05780	0.64	+3.9
1,304,230	+		PFLU_RS05780	0.64	+1.0
1,304,230	+		PFLU_RS05780	0.64	-1.9
1,304,230	+		PFLU_RS05780	0.64	+0.4
1,304,230	+		PFLU_RS05780	0.64	+1.6
1,304,230	+		PFLU_RS05780	0.64	-1.3
1,304,231	-		PFLU_RS05780	0.64	-0.4
1,304,231	-		PFLU_RS05780	0.64	+0.8
1,304,231	-		PFLU_RS05780	0.64	+1.0
1,304,231	-		PFLU_RS05780	0.64	+0.8
1,304,231	-		PFLU_RS05780	0.64	+1.6
1,304,231	-		PFLU_RS05780	0.64	-0.2
1,304,231	-		PFLU_RS05780	0.64	-3.1
1,304,231	-		PFLU_RS05780	0.64	+0.1
1,304,231	-		PFLU_RS05780	0.64	+1.6
1,304,231	-		PFLU_RS05780	0.64	-2.0
1,304,231	-		PFLU_RS05780	0.64	+0.6
1,304,231	-		PFLU_RS05780	0.64	-0.2
1,304,231	-		PFLU_RS05780	0.64	+0.5
1,304,231	-		PFLU_RS05780	0.64	+0.1
1,304,231	-		PFLU_RS05780	0.64	-1.4
1,304,231	-		PFLU_RS05780	0.64	-2.4
1,304,231	-		PFLU_RS05780	0.64	-0.9
1,304,231	-		PFLU_RS05780	0.64	-0.4
1,304,231	-		PFLU_RS05780	0.64	-2.4
1,304,315	+		PFLU_RS05780	0.75	-1.5
1,304,315	+		PFLU_RS05780	0.75	-1.2
1,304,315	+		PFLU_RS05780	0.75	-0.4
1,304,315	+		PFLU_RS05780	0.75	+0.8
1,304,315	+		PFLU_RS05780	0.75	+0.4
1,304,315	+		PFLU_RS05780	0.75	+0.3
1,304,316	-		PFLU_RS05780	0.75	+1.7
1,304,316	-		PFLU_RS05780	0.75	+0.8
1,304,316	-		PFLU_RS05780	0.75	-1.7
1,304,316	-		PFLU_RS05780	0.75	-2.1
1,304,316	-		PFLU_RS05780	0.75	+0.8
1,304,316	-		PFLU_RS05780	0.75	-1.0
1,304,420	+		PFLU_RS05780	0.89	-1.8
1,304,420	+		PFLU_RS05780	0.89	-0.5
1,304,421	-		PFLU_RS05780	0.90	-0.7
1,304,421	-		PFLU_RS05780	0.90	-0.9
1,304,421	-		PFLU_RS05780	0.90	-0.3
1,304,421	-		PFLU_RS05780	0.90	-2.3
1,304,486	+				+0.8
1,304,486	+				+0.5
1,304,486	+				+0.8
1,304,486	+				+2.1
1,304,486	+				+0.7
1,304,486	+				+0.4
1,304,486	+				+0.8
1,304,486	+				-2.0
1,304,486	+				+1.3
1,304,486	+				-1.0
1,304,486	+				+0.1
1,304,486	+				-1.6
1,304,486	+				-0.3
1,304,486	+				-0.0
1,304,487	-				-0.7
1,304,487	-				-0.4
1,304,487	-				+1.8
1,304,487	-				+0.2
1,304,487	-				+1.6
1,304,487	-				-1.0
1,304,487	-				+0.1
1,304,487	-				-2.2
1,304,487	-				+0.1
1,304,487	-				-0.1
1,304,487	-				+1.1
1,304,487	-				+0.6
1,304,508	+				-1.1
1,304,509	-				-0.8
1,304,509	-				-1.0
1,304,509	-				-0.7
1,304,637	-		PFLU_RS31425	0.54	+1.1
1,304,645	-		PFLU_RS31425	0.57	+0.9
1,304,645	-		PFLU_RS31425	0.57	+0.7
1,304,645	-		PFLU_RS31425	0.57	+0.8
1,304,645	-		PFLU_RS31425	0.57	+0.2
1,304,645	-		PFLU_RS31425	0.57	+0.8
1,304,645	-		PFLU_RS31425	0.57	+1.0
1,304,800	+				-0.2
1,304,801	-				+0.6
1,304,801	-				+0.4
1,304,801	-				+0.8
1,304,801	-				+0.7
1,304,882	+				-0.7
1,304,882	+				-1.7
1,304,882	+				-0.4
1,304,950	-				+0.6
1,304,986	+				+0.4
1,304,987	-				-2.5
1,305,024	+				-2.8
1,305,024	+				-3.3
1,305,024	+				-4.3
1,305,024	+				-3.0
1,305,024	+				-3.0
1,305,024	+				-1.4
1,305,025	-				+2.0
1,305,025	-				+1.8
1,305,025	-				+1.3
1,305,025	-				+0.3
1,305,028	+				-2.1
1,305,028	+				-4.0
1,305,028	+				-3.3
1,305,028	+				-3.0
1,305,028	+				-0.3
1,305,028	+				-4.0
1,305,028	+				-1.7
1,305,028	+				-2.8
1,305,028	+				-3.5
1,305,028	+				-2.3
1,305,028	+				-3.6
1,305,028	+				-1.2
1,305,028	+				-2.4
1,305,028	+				-3.6
1,305,028	+				-1.4
1,305,028	+				-1.2
1,305,029	-				-2.6
1,305,029	-				-2.8
1,305,029	-				+0.9
1,305,029	-				+2.1
1,305,029	-				-0.3
1,305,029	-				+1.3
1,305,029	-				+0.7
1,305,029	-				-0.7
1,305,029	-				-0.1
1,305,029	-				-2.8
1,305,029	-				-0.8
1,305,029	-				-1.4
1,305,141	+		PFLU_RS05785	0.15	+3.0
1,305,142	-		PFLU_RS05785	0.15	-0.8
1,305,142	-		PFLU_RS05785	0.15	-0.9
1,305,281	+		PFLU_RS05785	0.56	+0.6
1,305,365	+		PFLU_RS05785	0.80	-0.4
1,305,365	+		PFLU_RS05785	0.80	+1.6
1,305,365	+		PFLU_RS05785	0.80	-1.3
1,305,366	-		PFLU_RS05785	0.80	+0.4
1,305,366	-		PFLU_RS05785	0.80	-1.2
1,305,366	-		PFLU_RS05785	0.80	-0.7
1,305,824	+		PFLU_RS05790	0.72	-0.3
1,305,824	+		PFLU_RS05790	0.72	+0.9
1,305,825	-		PFLU_RS05790	0.72	+1.5
1,305,825	-		PFLU_RS05790	0.72	+0.2
1,305,825	-		PFLU_RS05790	0.72	-1.3
1,305,860	+		PFLU_RS05790	0.78	+0.2
1,305,968	+				-0.1
1,305,969	-				+1.9
1,305,990	+				+0.5
1,305,991	-				-0.3
1,305,991	-				+0.1
1,305,991	-				-0.7
1,305,991	-				+1.1
1,306,117	+		PFLU_RS05795	0.23	-0.4
1,306,117	+		PFLU_RS05795	0.23	+1.3
1,306,117	+		PFLU_RS05795	0.23	+0.4
1,306,118	-		PFLU_RS05795	0.24	+1.0
1,306,118	-		PFLU_RS05795	0.24	-0.5
1,306,118	-		PFLU_RS05795	0.24	+0.7
1,306,118	-		PFLU_RS05795	0.24	-0.8
1,306,239	-		PFLU_RS05795	0.43	-0.0
1,306,239	-		PFLU_RS05795	0.43	+1.2
1,306,239	-		PFLU_RS05795	0.43	-0.1
1,306,364	+		PFLU_RS05795	0.64	+0.5
1,306,365	-		PFLU_RS05795	0.64	+0.6