Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS03230 and PFLU_RS03235 are separated by 145 nucleotides PFLU_RS03235 and PFLU_RS03240 overlap by 4 nucleotides PFLU_RS03240 and PFLU_RS03245 are separated by 66 nucleotides PFLU_RS03245 and PFLU_RS03250 are separated by 147 nucleotides PFLU_RS03250 and PFLU_RS03255 are separated by 85 nucleotides
PFLU_RS03230: PFLU_RS03230 - serine protein kinase RIO, at 747,129 to 748,028
_RS03230
PFLU_RS03235: PFLU_RS03235 - Cu(I)-responsive transcriptional regulator, at 748,174 to 748,575
_RS03235
PFLU_RS03240: PFLU_RS03240 - copper-translocating P-type ATPase, at 748,572 to 750,773
_RS03240
PFLU_RS03245: PFLU_RS03245 - hypothetical protein, at 750,840 to 751,220
_RS03245
PFLU_RS03250: PFLU_RS03250 - heavy-metal-associated domain-containing protein, at 751,368 to 751,565
_RS03250
PFLU_RS03255: PFLU_RS03255 - multidrug effflux MFS transporter, at 751,651 to 752,844
_RS03255
Position (kb) 748
749
750
751 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 747.762 kb on + strand, within PFLU_RS03230 at 747.763 kb on - strand, within PFLU_RS03230 at 747.801 kb on + strand, within PFLU_RS03230 at 747.802 kb on - strand, within PFLU_RS03230 at 747.825 kb on + strand, within PFLU_RS03230 at 747.826 kb on - strand, within PFLU_RS03230 at 747.826 kb on - strand, within PFLU_RS03230 at 747.826 kb on - strand, within PFLU_RS03230 at 747.826 kb on - strand, within PFLU_RS03230 at 747.826 kb on - strand, within PFLU_RS03230 at 748.037 kb on + strand at 748.038 kb on - strand at 748.038 kb on - strand at 748.038 kb on - strand at 748.165 kb on + strand at 748.165 kb on + strand at 748.165 kb on + strand at 748.165 kb on + strand at 748.165 kb on + strand at 748.314 kb on + strand, within PFLU_RS03235 at 748.315 kb on - strand, within PFLU_RS03235 at 748.315 kb on - strand, within PFLU_RS03235 at 748.315 kb on - strand, within PFLU_RS03235 at 748.428 kb on + strand, within PFLU_RS03235 at 748.428 kb on + strand, within PFLU_RS03235 at 748.460 kb on + strand, within PFLU_RS03235 at 748.517 kb on + strand, within PFLU_RS03235 at 748.518 kb on - strand, within PFLU_RS03235 at 748.518 kb on - strand, within PFLU_RS03235 at 748.518 kb on - strand, within PFLU_RS03235 at 748.598 kb on + strand at 748.598 kb on + strand at 748.620 kb on + strand at 748.620 kb on + strand at 748.620 kb on + strand at 748.621 kb on - strand at 748.621 kb on - strand at 748.621 kb on - strand at 748.721 kb on + strand at 748.722 kb on - strand at 748.723 kb on + strand at 748.723 kb on + strand at 748.723 kb on + strand at 748.723 kb on + strand at 748.723 kb on + strand at 748.724 kb on - strand at 748.724 kb on - strand at 748.762 kb on + strand at 748.762 kb on + strand at 748.763 kb on - strand at 748.763 kb on - strand at 749.442 kb on + strand, within PFLU_RS03240 at 749.443 kb on - strand, within PFLU_RS03240 at 749.443 kb on - strand, within PFLU_RS03240 at 749.443 kb on - strand, within PFLU_RS03240 at 749.483 kb on + strand, within PFLU_RS03240 at 749.483 kb on + strand, within PFLU_RS03240 at 749.484 kb on - strand, within PFLU_RS03240 at 749.484 kb on - strand, within PFLU_RS03240 at 749.704 kb on + strand, within PFLU_RS03240 at 749.705 kb on - strand, within PFLU_RS03240 at 749.774 kb on + strand, within PFLU_RS03240 at 749.774 kb on + strand, within PFLU_RS03240 at 749.875 kb on - strand, within PFLU_RS03240 at 750.030 kb on + strand, within PFLU_RS03240 at 750.036 kb on + strand, within PFLU_RS03240 at 750.093 kb on + strand, within PFLU_RS03240 at 750.094 kb on - strand, within PFLU_RS03240 at 750.094 kb on - strand, within PFLU_RS03240 at 750.175 kb on + strand, within PFLU_RS03240 at 750.176 kb on - strand, within PFLU_RS03240 at 750.176 kb on - strand, within PFLU_RS03240 at 750.223 kb on + strand, within PFLU_RS03240 at 750.224 kb on - strand, within PFLU_RS03240 at 750.224 kb on - strand, within PFLU_RS03240 at 750.265 kb on + strand, within PFLU_RS03240 at 750.265 kb on + strand, within PFLU_RS03240 at 750.265 kb on + strand, within PFLU_RS03240 at 750.265 kb on + strand, within PFLU_RS03240 at 750.265 kb on + strand, within PFLU_RS03240 at 750.265 kb on + strand, within PFLU_RS03240 at 750.265 kb on + strand, within PFLU_RS03240 at 750.265 kb on + strand, within PFLU_RS03240 at 750.266 kb on - strand, within PFLU_RS03240 at 750.266 kb on - strand, within PFLU_RS03240 at 750.266 kb on - strand, within PFLU_RS03240 at 750.266 kb on - strand, within PFLU_RS03240 at 750.266 kb on - strand, within PFLU_RS03240 at 750.266 kb on - strand, within PFLU_RS03240 at 750.269 kb on + strand, within PFLU_RS03240 at 750.269 kb on + strand, within PFLU_RS03240 at 750.269 kb on + strand, within PFLU_RS03240 at 750.269 kb on + strand, within PFLU_RS03240 at 750.269 kb on + strand, within PFLU_RS03240 at 750.270 kb on - strand, within PFLU_RS03240 at 750.270 kb on - strand, within PFLU_RS03240 at 750.270 kb on - strand, within PFLU_RS03240 at 750.270 kb on - strand, within PFLU_RS03240 at 750.358 kb on + strand, within PFLU_RS03240 at 750.358 kb on + strand, within PFLU_RS03240 at 750.358 kb on + strand, within PFLU_RS03240 at 750.358 kb on + strand, within PFLU_RS03240 at 750.358 kb on + strand, within PFLU_RS03240 at 750.358 kb on + strand, within PFLU_RS03240 at 750.358 kb on + strand, within PFLU_RS03240 at 750.358 kb on + strand, within PFLU_RS03240 at 750.358 kb on + strand, within PFLU_RS03240 at 750.358 kb on + strand, within PFLU_RS03240 at 750.358 kb on + strand, within PFLU_RS03240 at 750.358 kb on + strand, within PFLU_RS03240 at 750.358 kb on + strand, within PFLU_RS03240 at 750.358 kb on + strand, within PFLU_RS03240 at 750.358 kb on + strand, within PFLU_RS03240 at 750.359 kb on - strand, within PFLU_RS03240 at 750.359 kb on - strand, within PFLU_RS03240 at 750.359 kb on - strand, within PFLU_RS03240 at 750.359 kb on - strand, within PFLU_RS03240 at 750.359 kb on - strand, within PFLU_RS03240 at 750.359 kb on - strand, within PFLU_RS03240 at 750.359 kb on - strand, within PFLU_RS03240 at 750.359 kb on - strand, within PFLU_RS03240 at 750.359 kb on - strand, within PFLU_RS03240 at 750.359 kb on - strand, within PFLU_RS03240 at 750.359 kb on - strand, within PFLU_RS03240 at 750.359 kb on - strand, within PFLU_RS03240 at 750.359 kb on - strand, within PFLU_RS03240 at 750.359 kb on - strand, within PFLU_RS03240 at 750.574 kb on + strand at 750.574 kb on + strand at 750.574 kb on + strand at 750.802 kb on + strand at 750.803 kb on - strand at 750.841 kb on + strand at 750.841 kb on + strand at 750.842 kb on - strand at 750.842 kb on - strand at 750.842 kb on - strand at 750.844 kb on + strand at 750.845 kb on - strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 751.005 kb on + strand, within PFLU_RS03245 at 751.005 kb on + strand, within PFLU_RS03245 at 751.005 kb on + strand, within PFLU_RS03245 at 751.006 kb on - strand, within PFLU_RS03245 at 751.006 kb on - strand, within PFLU_RS03245 at 751.006 kb on - strand, within PFLU_RS03245 at 751.006 kb on - strand, within PFLU_RS03245 at 751.078 kb on + strand, within PFLU_RS03245 at 751.078 kb on + strand, within PFLU_RS03245 at 751.078 kb on + strand, within PFLU_RS03245 at 751.078 kb on + strand, within PFLU_RS03245 at 751.078 kb on + strand, within PFLU_RS03245 at 751.078 kb on + strand, within PFLU_RS03245 at 751.078 kb on + strand, within PFLU_RS03245 at 751.078 kb on + strand, within PFLU_RS03245 at 751.078 kb on + strand, within PFLU_RS03245 at 751.078 kb on + strand, within PFLU_RS03245 at 751.078 kb on + strand, within PFLU_RS03245 at 751.078 kb on + strand, within PFLU_RS03245 at 751.078 kb on + strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.141 kb on + strand, within PFLU_RS03245 at 751.141 kb on + strand, within PFLU_RS03245 at 751.141 kb on + strand, within PFLU_RS03245 at 751.141 kb on + strand, within PFLU_RS03245 at 751.141 kb on + strand, within PFLU_RS03245 at 751.142 kb on - strand, within PFLU_RS03245 at 751.142 kb on - strand, within PFLU_RS03245 at 751.142 kb on - strand, within PFLU_RS03245 at 751.282 kb on - strand at 751.296 kb on + strand at 751.296 kb on + strand at 751.296 kb on + strand at 751.296 kb on + strand at 751.297 kb on - strand at 751.297 kb on - strand at 751.315 kb on + strand at 751.315 kb on + strand at 751.316 kb on - strand at 751.375 kb on + strand at 751.375 kb on + strand at 751.375 kb on + strand at 751.376 kb on - strand at 751.376 kb on - strand at 751.376 kb on - strand at 751.376 kb on - strand at 751.376 kb on - strand at 751.545 kb on + strand, within PFLU_RS03250 at 751.546 kb on - strand at 751.546 kb on - strand at 751.559 kb on - strand at 751.559 kb on - strand at 751.559 kb on - strand at 751.559 kb on - strand at 751.577 kb on - strand at 751.580 kb on + strand at 751.589 kb on - strand at 751.589 kb on - strand at 751.621 kb on + strand at 751.664 kb on + strand at 751.665 kb on - strand at 751.665 kb on - strand at 751.665 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 747,762 + PFLU_RS03230 0.70 -1.2 747,763 - PFLU_RS03230 0.70 -0.0 747,801 + PFLU_RS03230 0.75 -0.5 747,802 - PFLU_RS03230 0.75 +0.5 747,825 + PFLU_RS03230 0.77 +1.4 747,826 - PFLU_RS03230 0.77 -0.9 747,826 - PFLU_RS03230 0.77 +0.8 747,826 - PFLU_RS03230 0.77 -2.9 747,826 - PFLU_RS03230 0.77 +2.9 747,826 - PFLU_RS03230 0.77 +1.0 748,037 + -1.6 748,038 - +0.4 748,038 - -1.0 748,038 - -1.0 748,165 + -0.2 748,165 + +1.2 748,165 + -0.4 748,165 + -0.3 748,165 + +0.5 748,314 + PFLU_RS03235 0.35 -2.7 748,315 - PFLU_RS03235 0.35 +0.9 748,315 - PFLU_RS03235 0.35 -1.0 748,315 - PFLU_RS03235 0.35 -1.9 748,428 + PFLU_RS03235 0.63 +0.9 748,428 + PFLU_RS03235 0.63 +0.8 748,460 + PFLU_RS03235 0.71 +1.8 748,517 + PFLU_RS03235 0.85 +1.1 748,518 - PFLU_RS03235 0.86 +0.5 748,518 - PFLU_RS03235 0.86 +0.3 748,518 - PFLU_RS03235 0.86 +0.6 748,598 + +0.9 748,598 + -0.6 748,620 + +1.1 748,620 + -2.3 748,620 + -1.6 748,621 - -0.2 748,621 - +0.1 748,621 - +1.1 748,721 + -1.9 748,722 - -1.4 748,723 + +0.3 748,723 + -1.8 748,723 + +0.1 748,723 + -2.4 748,723 + +2.2 748,724 - -1.8 748,724 - -1.2 748,762 + +0.7 748,762 + -0.2 748,763 - +0.6 748,763 - -1.0 749,442 + PFLU_RS03240 0.40 -0.2 749,443 - PFLU_RS03240 0.40 +0.7 749,443 - PFLU_RS03240 0.40 +0.2 749,443 - PFLU_RS03240 0.40 +1.4 749,483 + PFLU_RS03240 0.41 -0.3 749,483 + PFLU_RS03240 0.41 -0.2 749,484 - PFLU_RS03240 0.41 -1.6 749,484 - PFLU_RS03240 0.41 -1.5 749,704 + PFLU_RS03240 0.51 +0.1 749,705 - PFLU_RS03240 0.51 +1.3 749,774 + PFLU_RS03240 0.55 -0.3 749,774 + PFLU_RS03240 0.55 -0.3 749,875 - PFLU_RS03240 0.59 +0.2 750,030 + PFLU_RS03240 0.66 -1.1 750,036 + PFLU_RS03240 0.66 -2.2 750,093 + PFLU_RS03240 0.69 -1.0 750,094 - PFLU_RS03240 0.69 +0.7 750,094 - PFLU_RS03240 0.69 +1.0 750,175 + PFLU_RS03240 0.73 +0.6 750,176 - PFLU_RS03240 0.73 -1.8 750,176 - PFLU_RS03240 0.73 -3.0 750,223 + PFLU_RS03240 0.75 -0.9 750,224 - PFLU_RS03240 0.75 +0.3 750,224 - PFLU_RS03240 0.75 -0.8 750,265 + PFLU_RS03240 0.77 +0.4 750,265 + PFLU_RS03240 0.77 -0.4 750,265 + PFLU_RS03240 0.77 -1.6 750,265 + PFLU_RS03240 0.77 +2.3 750,265 + PFLU_RS03240 0.77 +0.9 750,265 + PFLU_RS03240 0.77 -1.6 750,265 + PFLU_RS03240 0.77 -0.9 750,265 + PFLU_RS03240 0.77 -0.4 750,266 - PFLU_RS03240 0.77 -1.5 750,266 - PFLU_RS03240 0.77 -2.1 750,266 - PFLU_RS03240 0.77 +1.0 750,266 - PFLU_RS03240 0.77 -0.8 750,266 - PFLU_RS03240 0.77 -2.4 750,266 - PFLU_RS03240 0.77 +0.8 750,269 + PFLU_RS03240 0.77 +0.5 750,269 + PFLU_RS03240 0.77 -1.2 750,269 + PFLU_RS03240 0.77 +1.1 750,269 + PFLU_RS03240 0.77 +0.9 750,269 + PFLU_RS03240 0.77 -0.3 750,270 - PFLU_RS03240 0.77 -2.2 750,270 - PFLU_RS03240 0.77 -1.1 750,270 - PFLU_RS03240 0.77 +1.8 750,270 - PFLU_RS03240 0.77 +1.5 750,358 + PFLU_RS03240 0.81 +0.4 750,358 + PFLU_RS03240 0.81 +1.9 750,358 + PFLU_RS03240 0.81 -0.8 750,358 + PFLU_RS03240 0.81 +0.2 750,358 + PFLU_RS03240 0.81 +0.2 750,358 + PFLU_RS03240 0.81 -0.7 750,358 + PFLU_RS03240 0.81 -0.0 750,358 + PFLU_RS03240 0.81 -0.5 750,358 + PFLU_RS03240 0.81 -1.4 750,358 + PFLU_RS03240 0.81 -1.3 750,358 + PFLU_RS03240 0.81 +0.7 750,358 + PFLU_RS03240 0.81 +0.6 750,358 + PFLU_RS03240 0.81 -0.0 750,358 + PFLU_RS03240 0.81 -0.1 750,358 + PFLU_RS03240 0.81 -1.3 750,359 - PFLU_RS03240 0.81 -1.0 750,359 - PFLU_RS03240 0.81 -2.5 750,359 - PFLU_RS03240 0.81 +0.3 750,359 - PFLU_RS03240 0.81 -0.9 750,359 - PFLU_RS03240 0.81 +0.4 750,359 - PFLU_RS03240 0.81 -1.6 750,359 - PFLU_RS03240 0.81 -2.3 750,359 - PFLU_RS03240 0.81 +0.5 750,359 - PFLU_RS03240 0.81 +1.4 750,359 - PFLU_RS03240 0.81 -1.9 750,359 - PFLU_RS03240 0.81 -1.8 750,359 - PFLU_RS03240 0.81 +0.2 750,359 - PFLU_RS03240 0.81 -2.1 750,359 - PFLU_RS03240 0.81 -1.0 750,574 + +1.0 750,574 + +0.5 750,574 + -0.8 750,802 + +0.4 750,803 - +1.7 750,841 + +0.2 750,841 + +0.4 750,842 - -0.8 750,842 - -2.0 750,842 - +0.1 750,844 + -1.6 750,845 - +0.5 750,868 + -0.7 750,868 + +1.1 750,868 + -1.4 750,868 + +2.3 750,868 + -1.3 750,868 + +0.8 750,868 + +1.2 750,869 - +1.2 750,869 - +1.7 750,869 - +0.4 750,869 - -2.0 750,869 - -0.4 750,869 - +0.7 750,869 - -0.3 750,869 - +1.1 750,869 - -0.8 750,869 - -1.5 750,869 - -1.4 750,869 - +0.0 750,869 - -1.1 750,869 - +0.2 750,869 - -1.2 750,869 - +2.1 750,869 - -3.1 751,005 + PFLU_RS03245 0.43 -1.2 751,005 + PFLU_RS03245 0.43 +1.3 751,005 + PFLU_RS03245 0.43 +0.9 751,006 - PFLU_RS03245 0.44 +0.4 751,006 - PFLU_RS03245 0.44 -1.8 751,006 - PFLU_RS03245 0.44 +0.1 751,006 - PFLU_RS03245 0.44 -0.6 751,078 + PFLU_RS03245 0.62 +2.3 751,078 + PFLU_RS03245 0.62 -1.7 751,078 + PFLU_RS03245 0.62 -0.1 751,078 + PFLU_RS03245 0.62 -1.0 751,078 + PFLU_RS03245 0.62 -0.4 751,078 + PFLU_RS03245 0.62 -2.4 751,078 + PFLU_RS03245 0.62 +0.5 751,078 + PFLU_RS03245 0.62 +0.6 751,078 + PFLU_RS03245 0.62 +0.1 751,078 + PFLU_RS03245 0.62 +1.0 751,078 + PFLU_RS03245 0.62 +1.7 751,078 + PFLU_RS03245 0.62 +0.8 751,078 + PFLU_RS03245 0.62 -1.3 751,079 - PFLU_RS03245 0.63 -0.3 751,079 - PFLU_RS03245 0.63 -0.0 751,079 - PFLU_RS03245 0.63 +1.7 751,079 - PFLU_RS03245 0.63 +0.8 751,079 - PFLU_RS03245 0.63 +0.8 751,079 - PFLU_RS03245 0.63 +0.9 751,079 - PFLU_RS03245 0.63 +0.5 751,079 - PFLU_RS03245 0.63 +0.5 751,079 - PFLU_RS03245 0.63 -1.4 751,079 - PFLU_RS03245 0.63 +0.4 751,079 - PFLU_RS03245 0.63 +1.1 751,079 - PFLU_RS03245 0.63 +1.5 751,079 - PFLU_RS03245 0.63 -1.8 751,141 + PFLU_RS03245 0.79 +0.3 751,141 + PFLU_RS03245 0.79 -3.2 751,141 + PFLU_RS03245 0.79 -0.9 751,141 + PFLU_RS03245 0.79 +1.1 751,141 + PFLU_RS03245 0.79 +1.1 751,142 - PFLU_RS03245 0.79 +0.2 751,142 - PFLU_RS03245 0.79 +1.5 751,142 - PFLU_RS03245 0.79 -1.0 751,282 - -0.7 751,296 + -1.7 751,296 + -1.5 751,296 + -0.3 751,296 + +0.5 751,297 - +1.2 751,297 - -2.6 751,315 + -1.3 751,315 + -0.6 751,316 - -0.6 751,375 + -0.3 751,375 + +0.3 751,375 + -0.3 751,376 - -0.5 751,376 - +2.6 751,376 - +1.3 751,376 - +0.5 751,376 - +1.1 751,545 + PFLU_RS03250 0.89 +0.1 751,546 - -0.5 751,546 - -1.0 751,559 - -0.0 751,559 - +1.3 751,559 - +0.0 751,559 - +1.1 751,577 - +2.0 751,580 + +0.1 751,589 - -0.8 751,589 - -0.3 751,621 + +0.4 751,664 + +0.7 751,665 - +1.1 751,665 - +0.7 751,665 - -0.1
Or see this region's nucleotide sequence