Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS02610 and PFLU_RS02615 are separated by 158 nucleotides PFLU_RS02615 and PFLU_RS02620 are separated by 149 nucleotides PFLU_RS02620 and PFLU_RS02625 are separated by 214 nucleotides
PFLU_RS02610: PFLU_RS02610 - iron ABC transporter substrate-binding protein, at 600,207 to 601,232
_RS02610
PFLU_RS02615: PFLU_RS02615 - tRNA-Leu, at 601,391 to 601,477
_RS02615
PFLU_RS02620: PFLU_RS02620 - tRNA-Leu, at 601,627 to 601,713
_RS02620
PFLU_RS02625: PFLU_RS02625 - ribonuclease R, at 601,928 to 604,564
_RS02625
Position (kb) 601
602 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 600.493 kb on + strand, within PFLU_RS02610 at 600.493 kb on + strand, within PFLU_RS02610 at 600.493 kb on + strand, within PFLU_RS02610 at 600.493 kb on + strand, within PFLU_RS02610 at 600.493 kb on + strand, within PFLU_RS02610 at 600.493 kb on + strand, within PFLU_RS02610 at 600.493 kb on + strand, within PFLU_RS02610 at 600.493 kb on + strand, within PFLU_RS02610 at 600.493 kb on + strand, within PFLU_RS02610 at 600.493 kb on + strand, within PFLU_RS02610 at 600.493 kb on + strand, within PFLU_RS02610 at 600.493 kb on + strand, within PFLU_RS02610 at 600.493 kb on + strand, within PFLU_RS02610 at 600.493 kb on + strand, within PFLU_RS02610 at 600.494 kb on - strand, within PFLU_RS02610 at 600.494 kb on - strand, within PFLU_RS02610 at 600.494 kb on - strand, within PFLU_RS02610 at 600.494 kb on - strand, within PFLU_RS02610 at 600.494 kb on - strand, within PFLU_RS02610 at 600.494 kb on - strand, within PFLU_RS02610 at 600.494 kb on - strand, within PFLU_RS02610 at 600.494 kb on - strand, within PFLU_RS02610 at 600.494 kb on - strand, within PFLU_RS02610 at 600.494 kb on - strand, within PFLU_RS02610 at 600.494 kb on - strand, within PFLU_RS02610 at 600.494 kb on - strand, within PFLU_RS02610 at 600.494 kb on - strand, within PFLU_RS02610 at 600.494 kb on - strand, within PFLU_RS02610 at 600.494 kb on - strand, within PFLU_RS02610 at 600.494 kb on - strand, within PFLU_RS02610 at 600.547 kb on + strand, within PFLU_RS02610 at 600.547 kb on + strand, within PFLU_RS02610 at 600.547 kb on + strand, within PFLU_RS02610 at 600.547 kb on + strand, within PFLU_RS02610 at 600.547 kb on + strand, within PFLU_RS02610 at 600.547 kb on + strand, within PFLU_RS02610 at 600.547 kb on + strand, within PFLU_RS02610 at 600.547 kb on + strand, within PFLU_RS02610 at 600.547 kb on + strand, within PFLU_RS02610 at 600.547 kb on + strand, within PFLU_RS02610 at 600.547 kb on + strand, within PFLU_RS02610 at 600.547 kb on + strand, within PFLU_RS02610 at 600.547 kb on + strand, within PFLU_RS02610 at 600.547 kb on + strand, within PFLU_RS02610 at 600.547 kb on + strand, within PFLU_RS02610 at 600.547 kb on + strand, within PFLU_RS02610 at 600.547 kb on + strand, within PFLU_RS02610 at 600.547 kb on + strand, within PFLU_RS02610 at 600.547 kb on + strand, within PFLU_RS02610 at 600.548 kb on - strand, within PFLU_RS02610 at 600.548 kb on - strand, within PFLU_RS02610 at 600.548 kb on - strand, within PFLU_RS02610 at 600.548 kb on - strand, within PFLU_RS02610 at 600.548 kb on - strand, within PFLU_RS02610 at 600.548 kb on - strand, within PFLU_RS02610 at 600.548 kb on - strand, within PFLU_RS02610 at 600.548 kb on - strand, within PFLU_RS02610 at 600.551 kb on + strand, within PFLU_RS02610 at 600.551 kb on + strand, within PFLU_RS02610 at 600.551 kb on + strand, within PFLU_RS02610 at 600.551 kb on + strand, within PFLU_RS02610 at 600.551 kb on + strand, within PFLU_RS02610 at 600.551 kb on + strand, within PFLU_RS02610 at 600.551 kb on + strand, within PFLU_RS02610 at 600.551 kb on + strand, within PFLU_RS02610 at 600.551 kb on + strand, within PFLU_RS02610 at 600.552 kb on - strand, within PFLU_RS02610 at 600.552 kb on - strand, within PFLU_RS02610 at 600.552 kb on - strand, within PFLU_RS02610 at 600.552 kb on - strand, within PFLU_RS02610 at 600.552 kb on - strand, within PFLU_RS02610 at 600.552 kb on - strand, within PFLU_RS02610 at 600.552 kb on - strand, within PFLU_RS02610 at 600.616 kb on + strand, within PFLU_RS02610 at 600.616 kb on + strand, within PFLU_RS02610 at 600.616 kb on + strand, within PFLU_RS02610 at 600.616 kb on + strand, within PFLU_RS02610 at 600.617 kb on - strand, within PFLU_RS02610 at 600.617 kb on - strand, within PFLU_RS02610 at 600.617 kb on - strand, within PFLU_RS02610 at 600.617 kb on - strand, within PFLU_RS02610 at 600.617 kb on - strand, within PFLU_RS02610 at 600.809 kb on + strand, within PFLU_RS02610 at 600.809 kb on + strand, within PFLU_RS02610 at 600.868 kb on + strand, within PFLU_RS02610 at 600.868 kb on + strand, within PFLU_RS02610 at 600.868 kb on + strand, within PFLU_RS02610 at 600.868 kb on + strand, within PFLU_RS02610 at 600.868 kb on + strand, within PFLU_RS02610 at 600.868 kb on + strand, within PFLU_RS02610 at 600.868 kb on + strand, within PFLU_RS02610 at 600.868 kb on + strand, within PFLU_RS02610 at 600.868 kb on + strand, within PFLU_RS02610 at 600.868 kb on + strand, within PFLU_RS02610 at 600.868 kb on + strand, within PFLU_RS02610 at 600.868 kb on + strand, within PFLU_RS02610 at 600.868 kb on + strand, within PFLU_RS02610 at 600.869 kb on - strand, within PFLU_RS02610 at 600.869 kb on - strand, within PFLU_RS02610 at 600.869 kb on - strand, within PFLU_RS02610 at 600.869 kb on - strand, within PFLU_RS02610 at 600.869 kb on - strand, within PFLU_RS02610 at 600.869 kb on - strand, within PFLU_RS02610 at 600.869 kb on - strand, within PFLU_RS02610 at 600.869 kb on - strand, within PFLU_RS02610 at 600.882 kb on + strand, within PFLU_RS02610 at 600.883 kb on - strand, within PFLU_RS02610 at 600.883 kb on - strand, within PFLU_RS02610 at 600.883 kb on - strand, within PFLU_RS02610 at 600.883 kb on - strand, within PFLU_RS02610 at 600.961 kb on + strand, within PFLU_RS02610 at 600.961 kb on + strand, within PFLU_RS02610 at 600.961 kb on + strand, within PFLU_RS02610 at 600.962 kb on - strand, within PFLU_RS02610 at 600.962 kb on - strand, within PFLU_RS02610 at 600.962 kb on - strand, within PFLU_RS02610 at 601.111 kb on + strand, within PFLU_RS02610 at 601.111 kb on + strand, within PFLU_RS02610 at 601.111 kb on + strand, within PFLU_RS02610 at 601.112 kb on - strand, within PFLU_RS02610 at 601.112 kb on - strand, within PFLU_RS02610 at 601.112 kb on - strand, within PFLU_RS02610 at 601.142 kb on - strand at 601.142 kb on - strand at 601.142 kb on - strand at 601.252 kb on + strand at 601.252 kb on + strand at 601.252 kb on + strand at 601.252 kb on + strand at 601.252 kb on + strand at 601.252 kb on + strand at 601.252 kb on + strand at 601.252 kb on + strand at 601.253 kb on - strand at 601.253 kb on - strand at 601.253 kb on - strand at 601.253 kb on - strand at 601.253 kb on - strand at 601.253 kb on - strand at 601.253 kb on - strand at 601.263 kb on + strand at 601.263 kb on + strand at 601.264 kb on - strand at 601.264 kb on - strand at 601.267 kb on + strand at 601.267 kb on + strand at 601.268 kb on - strand at 601.268 kb on - strand at 601.268 kb on - strand at 601.282 kb on + strand at 601.458 kb on - strand, within PFLU_RS02615 at 601.458 kb on - strand, within PFLU_RS02615 at 601.458 kb on - strand, within PFLU_RS02615 at 601.511 kb on + strand at 601.511 kb on + strand at 601.511 kb on + strand at 601.511 kb on + strand at 601.512 kb on - strand at 601.512 kb on - strand at 601.512 kb on - strand at 601.512 kb on - strand at 601.513 kb on + strand at 601.513 kb on + strand at 601.514 kb on - strand at 601.752 kb on + strand at 601.752 kb on + strand at 601.752 kb on + strand at 601.753 kb on - strand at 601.767 kb on - strand at 601.773 kb on + strand at 601.774 kb on - strand at 601.842 kb on + strand at 601.842 kb on + strand at 601.842 kb on + strand at 601.843 kb on - strand at 601.879 kb on + strand at 601.880 kb on - strand at 601.885 kb on + strand at 601.885 kb on + strand at 601.885 kb on + strand at 601.886 kb on - strand at 601.886 kb on - strand at 601.886 kb on - strand at 601.895 kb on + strand at 601.895 kb on + strand at 601.895 kb on + strand at 601.896 kb on - strand at 601.896 kb on - strand at 601.905 kb on - strand at 601.905 kb on - strand at 601.906 kb on + strand at 601.906 kb on + strand at 601.906 kb on + strand at 601.906 kb on + strand at 601.906 kb on + strand at 601.906 kb on + strand at 601.906 kb on + strand at 601.906 kb on + strand at 601.906 kb on + strand at 601.906 kb on + strand at 601.906 kb on + strand at 601.906 kb on + strand at 601.906 kb on + strand at 601.906 kb on + strand at 601.906 kb on + strand at 601.906 kb on + strand at 601.906 kb on + strand at 601.906 kb on + strand at 601.906 kb on + strand at 601.907 kb on - strand at 601.907 kb on - strand at 601.907 kb on - strand at 601.907 kb on - strand at 601.907 kb on - strand at 601.907 kb on - strand at 601.907 kb on - strand at 601.907 kb on - strand at 601.907 kb on - strand at 601.907 kb on - strand at 601.907 kb on - strand at 601.926 kb on + strand at 601.990 kb on + strand at 601.990 kb on + strand at 601.990 kb on + strand at 602.147 kb on + strand at 602.147 kb on + strand at 602.147 kb on + strand at 602.147 kb on + strand at 602.147 kb on + strand at 602.147 kb on + strand at 602.148 kb on - strand at 602.148 kb on - strand at 602.148 kb on - strand at 602.148 kb on - strand at 602.148 kb on - strand at 602.148 kb on - strand at 602.148 kb on - strand at 602.148 kb on - strand at 602.148 kb on - strand at 602.148 kb on - strand at 602.150 kb on - strand at 602.161 kb on + strand at 602.161 kb on + strand at 602.161 kb on + strand at 602.162 kb on - strand at 602.162 kb on - strand at 602.162 kb on - strand at 602.162 kb on - strand at 602.165 kb on + strand at 602.165 kb on + strand at 602.166 kb on - strand at 602.166 kb on - strand at 602.166 kb on - strand at 602.179 kb on + strand at 602.405 kb on + strand, within PFLU_RS02625 at 602.406 kb on - strand, within PFLU_RS02625
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 600,493 + PFLU_RS02610 0.28 +0.6 600,493 + PFLU_RS02610 0.28 +1.9 600,493 + PFLU_RS02610 0.28 -0.1 600,493 + PFLU_RS02610 0.28 +1.2 600,493 + PFLU_RS02610 0.28 -0.7 600,493 + PFLU_RS02610 0.28 +0.4 600,493 + PFLU_RS02610 0.28 +1.2 600,493 + PFLU_RS02610 0.28 +1.5 600,493 + PFLU_RS02610 0.28 +0.1 600,493 + PFLU_RS02610 0.28 +1.2 600,493 + PFLU_RS02610 0.28 -1.6 600,493 + PFLU_RS02610 0.28 -0.3 600,493 + PFLU_RS02610 0.28 -2.5 600,493 + PFLU_RS02610 0.28 +1.0 600,494 - PFLU_RS02610 0.28 +1.4 600,494 - PFLU_RS02610 0.28 -0.6 600,494 - PFLU_RS02610 0.28 +0.8 600,494 - PFLU_RS02610 0.28 +0.2 600,494 - PFLU_RS02610 0.28 -1.4 600,494 - PFLU_RS02610 0.28 -0.2 600,494 - PFLU_RS02610 0.28 -0.7 600,494 - PFLU_RS02610 0.28 +0.8 600,494 - PFLU_RS02610 0.28 -2.3 600,494 - PFLU_RS02610 0.28 -0.7 600,494 - PFLU_RS02610 0.28 +0.7 600,494 - PFLU_RS02610 0.28 +0.3 600,494 - PFLU_RS02610 0.28 +0.1 600,494 - PFLU_RS02610 0.28 +0.7 600,494 - PFLU_RS02610 0.28 -0.1 600,494 - PFLU_RS02610 0.28 +1.0 600,547 + PFLU_RS02610 0.33 +0.0 600,547 + PFLU_RS02610 0.33 -0.1 600,547 + PFLU_RS02610 0.33 -0.9 600,547 + PFLU_RS02610 0.33 +0.3 600,547 + PFLU_RS02610 0.33 -1.8 600,547 + PFLU_RS02610 0.33 +0.8 600,547 + PFLU_RS02610 0.33 -3.1 600,547 + PFLU_RS02610 0.33 +2.4 600,547 + PFLU_RS02610 0.33 +0.4 600,547 + PFLU_RS02610 0.33 +0.6 600,547 + PFLU_RS02610 0.33 -0.4 600,547 + PFLU_RS02610 0.33 +0.3 600,547 + PFLU_RS02610 0.33 +0.3 600,547 + PFLU_RS02610 0.33 -3.3 600,547 + PFLU_RS02610 0.33 -0.8 600,547 + PFLU_RS02610 0.33 +2.0 600,547 + PFLU_RS02610 0.33 +1.2 600,547 + PFLU_RS02610 0.33 -0.1 600,547 + PFLU_RS02610 0.33 +0.5 600,548 - PFLU_RS02610 0.33 +0.4 600,548 - PFLU_RS02610 0.33 +0.1 600,548 - PFLU_RS02610 0.33 -1.6 600,548 - PFLU_RS02610 0.33 -0.3 600,548 - PFLU_RS02610 0.33 +1.4 600,548 - PFLU_RS02610 0.33 +0.7 600,548 - PFLU_RS02610 0.33 +0.2 600,548 - PFLU_RS02610 0.33 -2.9 600,551 + PFLU_RS02610 0.34 -1.7 600,551 + PFLU_RS02610 0.34 +1.4 600,551 + PFLU_RS02610 0.34 +0.9 600,551 + PFLU_RS02610 0.34 +1.4 600,551 + PFLU_RS02610 0.34 +0.8 600,551 + PFLU_RS02610 0.34 -0.2 600,551 + PFLU_RS02610 0.34 -0.7 600,551 + PFLU_RS02610 0.34 -1.3 600,551 + PFLU_RS02610 0.34 -0.9 600,552 - PFLU_RS02610 0.34 -0.7 600,552 - PFLU_RS02610 0.34 +0.1 600,552 - PFLU_RS02610 0.34 -1.5 600,552 - PFLU_RS02610 0.34 +0.6 600,552 - PFLU_RS02610 0.34 +1.2 600,552 - PFLU_RS02610 0.34 +1.6 600,552 - PFLU_RS02610 0.34 -0.2 600,616 + PFLU_RS02610 0.40 +1.5 600,616 + PFLU_RS02610 0.40 +0.1 600,616 + PFLU_RS02610 0.40 -0.3 600,616 + PFLU_RS02610 0.40 +2.0 600,617 - PFLU_RS02610 0.40 +0.9 600,617 - PFLU_RS02610 0.40 +1.6 600,617 - PFLU_RS02610 0.40 +0.8 600,617 - PFLU_RS02610 0.40 +0.2 600,617 - PFLU_RS02610 0.40 -0.7 600,809 + PFLU_RS02610 0.59 +1.6 600,809 + PFLU_RS02610 0.59 -0.9 600,868 + PFLU_RS02610 0.64 -0.4 600,868 + PFLU_RS02610 0.64 -0.1 600,868 + PFLU_RS02610 0.64 -1.2 600,868 + PFLU_RS02610 0.64 +1.1 600,868 + PFLU_RS02610 0.64 +1.8 600,868 + PFLU_RS02610 0.64 +1.4 600,868 + PFLU_RS02610 0.64 +0.2 600,868 + PFLU_RS02610 0.64 +0.2 600,868 + PFLU_RS02610 0.64 +1.3 600,868 + PFLU_RS02610 0.64 +0.6 600,868 + PFLU_RS02610 0.64 +0.4 600,868 + PFLU_RS02610 0.64 +1.7 600,868 + PFLU_RS02610 0.64 -0.1 600,869 - PFLU_RS02610 0.65 +0.1 600,869 - PFLU_RS02610 0.65 +0.2 600,869 - PFLU_RS02610 0.65 +1.5 600,869 - PFLU_RS02610 0.65 -2.0 600,869 - PFLU_RS02610 0.65 -0.9 600,869 - PFLU_RS02610 0.65 +0.3 600,869 - PFLU_RS02610 0.65 +0.4 600,869 - PFLU_RS02610 0.65 +1.6 600,882 + PFLU_RS02610 0.66 +0.5 600,883 - PFLU_RS02610 0.66 +0.8 600,883 - PFLU_RS02610 0.66 +1.0 600,883 - PFLU_RS02610 0.66 +0.5 600,883 - PFLU_RS02610 0.66 -1.5 600,961 + PFLU_RS02610 0.73 -0.0 600,961 + PFLU_RS02610 0.73 +0.9 600,961 + PFLU_RS02610 0.73 -0.3 600,962 - PFLU_RS02610 0.74 -0.5 600,962 - PFLU_RS02610 0.74 -1.9 600,962 - PFLU_RS02610 0.74 +0.2 601,111 + PFLU_RS02610 0.88 -0.7 601,111 + PFLU_RS02610 0.88 +1.1 601,111 + PFLU_RS02610 0.88 -0.4 601,112 - PFLU_RS02610 0.88 +1.2 601,112 - PFLU_RS02610 0.88 -1.3 601,112 - PFLU_RS02610 0.88 -0.0 601,142 - -0.2 601,142 - -0.4 601,142 - -0.3 601,252 + -2.3 601,252 + -0.5 601,252 + -0.6 601,252 + -1.4 601,252 + -0.3 601,252 + +0.1 601,252 + +0.2 601,252 + -0.4 601,253 - +0.6 601,253 - +0.5 601,253 - +0.8 601,253 - -0.6 601,253 - +0.5 601,253 - +0.2 601,253 - +2.1 601,263 + +0.7 601,263 + -0.2 601,264 - +0.1 601,264 - +0.1 601,267 + -0.4 601,267 + +1.2 601,268 - -1.9 601,268 - -0.7 601,268 - -1.4 601,282 + -0.5 601,458 - PFLU_RS02615 0.77 +3.1 601,458 - PFLU_RS02615 0.77 -0.8 601,458 - PFLU_RS02615 0.77 -0.1 601,511 + +0.7 601,511 + -0.6 601,511 + -2.8 601,511 + -1.3 601,512 - +0.0 601,512 - +0.4 601,512 - -0.6 601,512 - +0.4 601,513 + -1.9 601,513 + -1.8 601,514 - -0.1 601,752 + -0.6 601,752 + +0.8 601,752 + +2.4 601,753 - -1.6 601,767 - -2.1 601,773 + +0.8 601,774 - -1.1 601,842 + +0.0 601,842 + -0.3 601,842 + -0.2 601,843 - +1.6 601,879 + -2.3 601,880 - +1.3 601,885 + -1.9 601,885 + +0.1 601,885 + -0.1 601,886 - -2.2 601,886 - +0.0 601,886 - -0.0 601,895 + -0.7 601,895 + -0.5 601,895 + -1.5 601,896 - +1.8 601,896 - -1.3 601,905 - +0.2 601,905 - +1.4 601,906 + +1.7 601,906 + -0.2 601,906 + -0.5 601,906 + +0.1 601,906 + +0.9 601,906 + -1.3 601,906 + -1.6 601,906 + +1.9 601,906 + +0.9 601,906 + +0.6 601,906 + -0.1 601,906 + +1.2 601,906 + +1.6 601,906 + +1.5 601,906 + -0.7 601,906 + +0.3 601,906 + +1.0 601,906 + +0.8 601,906 + -1.1 601,907 - +1.8 601,907 - -0.2 601,907 - -0.1 601,907 - +1.9 601,907 - +0.6 601,907 - -0.7 601,907 - +2.1 601,907 - -1.2 601,907 - -0.9 601,907 - +1.7 601,907 - -0.2 601,926 + +2.5 601,990 + +1.4 601,990 + -1.7 601,990 + -0.5 602,147 + -2.2 602,147 + +0.0 602,147 + +0.5 602,147 + +1.5 602,147 + -0.6 602,147 + +1.2 602,148 - +3.4 602,148 - +2.5 602,148 - -1.2 602,148 - -0.4 602,148 - +4.0 602,148 - +1.4 602,148 - +1.8 602,148 - +1.1 602,148 - +0.6 602,148 - +0.8 602,150 - +0.8 602,161 + -1.3 602,161 + -1.2 602,161 + +2.0 602,162 - +0.0 602,162 - +2.4 602,162 - -0.4 602,162 - +1.7 602,165 + +0.2 602,165 + -0.6 602,166 - +1.0 602,166 - +1.7 602,166 - +0.3 602,179 + +1.1 602,405 + PFLU_RS02625 0.18 -0.2 602,406 - PFLU_RS02625 0.18 +0.8
Or see this region's nucleotide sequence