Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_21940 and OH686_21945 are separated by 81 nucleotides OH686_21945 and OH686_21950 are separated by 57 nucleotides OH686_21950 and OH686_21955 are separated by 64 nucleotides OH686_21955 and OH686_21960 are separated by 16 nucleotides OH686_21960 and OH686_21965 are separated by 243 nucleotides
OH686_21940: OH686_21940 - DNA topoisomerase I, at 4,469,062 to 4,471,671
_21940
OH686_21945: OH686_21945 - hypothetical protein, at 4,471,753 to 4,472,271
_21945
OH686_21950: OH686_21950 - hypothetical protein, at 4,472,329 to 4,472,562
_21950
OH686_21955: OH686_21955 - Cell division inhibitor-related protein, at 4,472,627 to 4,473,097
_21955
OH686_21960: OH686_21960 - repressor LexA, at 4,473,114 to 4,473,725
_21960
OH686_21965: OH686_21965 - Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family, at 4,473,969 to 4,474,676
_21965
Position (kb) 4472
4473
4474 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 4471.724 kb on - strand at 4471.768 kb on + strand at 4471.768 kb on + strand at 4471.768 kb on + strand at 4471.768 kb on + strand at 4471.768 kb on + strand at 4471.768 kb on + strand at 4471.768 kb on + strand at 4471.768 kb on + strand at 4471.768 kb on + strand at 4471.768 kb on + strand at 4471.768 kb on + strand at 4471.768 kb on + strand at 4471.768 kb on + strand at 4471.768 kb on + strand at 4471.768 kb on + strand at 4471.769 kb on - strand at 4471.769 kb on - strand at 4471.769 kb on - strand at 4471.769 kb on - strand at 4471.769 kb on - strand at 4471.769 kb on - strand at 4471.769 kb on - strand at 4471.769 kb on - strand at 4471.769 kb on - strand at 4471.769 kb on - strand at 4471.769 kb on - strand at 4471.790 kb on + strand at 4471.790 kb on + strand at 4471.790 kb on + strand at 4471.790 kb on + strand at 4471.790 kb on + strand at 4471.790 kb on + strand at 4471.791 kb on - strand at 4471.791 kb on - strand at 4471.791 kb on - strand at 4471.791 kb on - strand at 4471.791 kb on - strand at 4471.815 kb on + strand, within OH686_21945 at 4471.816 kb on - strand, within OH686_21945 at 4471.939 kb on + strand, within OH686_21945 at 4471.939 kb on + strand, within OH686_21945 at 4471.942 kb on + strand, within OH686_21945 at 4471.942 kb on + strand, within OH686_21945 at 4471.942 kb on + strand, within OH686_21945 at 4471.942 kb on + strand, within OH686_21945 at 4471.942 kb on + strand, within OH686_21945 at 4471.942 kb on + strand, within OH686_21945 at 4471.942 kb on + strand, within OH686_21945 at 4471.942 kb on + strand, within OH686_21945 at 4471.942 kb on + strand, within OH686_21945 at 4471.943 kb on - strand, within OH686_21945 at 4471.943 kb on - strand, within OH686_21945 at 4471.943 kb on - strand, within OH686_21945 at 4471.943 kb on - strand, within OH686_21945 at 4471.943 kb on - strand, within OH686_21945 at 4471.943 kb on - strand, within OH686_21945 at 4471.943 kb on - strand, within OH686_21945 at 4471.943 kb on - strand, within OH686_21945 at 4471.943 kb on - strand, within OH686_21945 at 4471.943 kb on - strand, within OH686_21945 at 4471.943 kb on - strand, within OH686_21945 at 4471.943 kb on - strand, within OH686_21945 at 4471.943 kb on - strand, within OH686_21945 at 4471.943 kb on - strand, within OH686_21945 at 4472.075 kb on + strand, within OH686_21945 at 4472.086 kb on + strand, within OH686_21945 at 4472.275 kb on + strand at 4472.298 kb on + strand at 4472.298 kb on + strand at 4472.298 kb on + strand at 4472.298 kb on + strand at 4472.298 kb on + strand at 4472.298 kb on + strand at 4472.298 kb on + strand at 4472.298 kb on + strand at 4472.299 kb on - strand at 4472.299 kb on - strand at 4472.328 kb on + strand at 4472.328 kb on + strand at 4472.328 kb on + strand at 4472.328 kb on + strand at 4472.328 kb on + strand at 4472.328 kb on + strand at 4472.329 kb on - strand at 4472.329 kb on - strand at 4472.621 kb on + strand at 4472.642 kb on - strand at 4472.724 kb on - strand, within OH686_21955 at 4472.724 kb on - strand, within OH686_21955 at 4472.724 kb on - strand, within OH686_21955 at 4473.005 kb on + strand, within OH686_21955 at 4473.005 kb on + strand, within OH686_21955 at 4473.108 kb on + strand at 4473.108 kb on + strand at 4473.108 kb on + strand at 4473.108 kb on + strand at 4473.108 kb on + strand at 4473.108 kb on + strand at 4473.109 kb on - strand at 4473.109 kb on - strand at 4473.109 kb on - strand at 4473.109 kb on - strand at 4473.109 kb on - strand at 4473.109 kb on - strand at 4473.379 kb on + strand, within OH686_21960 at 4473.379 kb on + strand, within OH686_21960 at 4473.379 kb on + strand, within OH686_21960 at 4473.379 kb on + strand, within OH686_21960 at 4473.380 kb on - strand, within OH686_21960 at 4473.380 kb on - strand, within OH686_21960 at 4473.380 kb on - strand, within OH686_21960 at 4473.380 kb on - strand, within OH686_21960 at 4473.380 kb on - strand, within OH686_21960 at 4473.762 kb on - strand at 4473.765 kb on + strand at 4473.854 kb on + strand at 4473.863 kb on + strand at 4473.863 kb on + strand at 4473.863 kb on + strand at 4473.863 kb on + strand at 4473.863 kb on + strand at 4473.863 kb on + strand at 4473.863 kb on + strand at 4473.863 kb on + strand at 4473.864 kb on - strand at 4473.864 kb on - strand at 4473.864 kb on - strand at 4473.864 kb on - strand at 4473.864 kb on - strand at 4473.864 kb on - strand at 4473.869 kb on + strand at 4473.869 kb on + strand at 4473.870 kb on - strand at 4473.870 kb on - strand at 4473.870 kb on - strand at 4473.870 kb on - strand at 4473.873 kb on + strand at 4473.873 kb on + strand at 4473.873 kb on + strand at 4473.873 kb on + strand at 4473.873 kb on + strand at 4473.874 kb on - strand at 4473.874 kb on - strand at 4473.874 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 4,471,724 - -1.5 4,471,768 + -2.1 4,471,768 + -1.8 4,471,768 + -1.5 4,471,768 + -1.8 4,471,768 + -2.3 4,471,768 + -3.0 4,471,768 + -0.5 4,471,768 + -3.3 4,471,768 + -2.9 4,471,768 + -2.3 4,471,768 + -3.5 4,471,768 + -3.5 4,471,768 + -2.6 4,471,768 + -0.8 4,471,768 + -2.9 4,471,769 - -4.1 4,471,769 - -3.6 4,471,769 - -2.0 4,471,769 - -2.0 4,471,769 - -4.5 4,471,769 - -1.8 4,471,769 - -1.3 4,471,769 - -0.8 4,471,769 - -2.5 4,471,769 - -0.3 4,471,769 - -2.4 4,471,790 + -1.5 4,471,790 + -3.8 4,471,790 + -0.8 4,471,790 + -1.5 4,471,790 + -2.2 4,471,790 + -2.3 4,471,791 - -1.6 4,471,791 - +0.4 4,471,791 - -0.6 4,471,791 - -1.0 4,471,791 - -1.8 4,471,815 + OH686_21945 0.12 -1.3 4,471,816 - OH686_21945 0.12 -0.6 4,471,939 + OH686_21945 0.36 -1.1 4,471,939 + OH686_21945 0.36 -2.2 4,471,942 + OH686_21945 0.36 -2.1 4,471,942 + OH686_21945 0.36 -2.5 4,471,942 + OH686_21945 0.36 -0.6 4,471,942 + OH686_21945 0.36 -0.3 4,471,942 + OH686_21945 0.36 -2.7 4,471,942 + OH686_21945 0.36 -2.5 4,471,942 + OH686_21945 0.36 -1.2 4,471,942 + OH686_21945 0.36 -1.5 4,471,942 + OH686_21945 0.36 -3.7 4,471,943 - OH686_21945 0.37 -3.1 4,471,943 - OH686_21945 0.37 -0.8 4,471,943 - OH686_21945 0.37 -2.5 4,471,943 - OH686_21945 0.37 -1.2 4,471,943 - OH686_21945 0.37 -1.9 4,471,943 - OH686_21945 0.37 -3.2 4,471,943 - OH686_21945 0.37 -4.2 4,471,943 - OH686_21945 0.37 -2.9 4,471,943 - OH686_21945 0.37 -3.3 4,471,943 - OH686_21945 0.37 -0.8 4,471,943 - OH686_21945 0.37 -2.2 4,471,943 - OH686_21945 0.37 -1.4 4,471,943 - OH686_21945 0.37 -1.5 4,471,943 - OH686_21945 0.37 -2.2 4,472,075 + OH686_21945 0.62 -1.7 4,472,086 + OH686_21945 0.64 -3.8 4,472,275 + +0.2 4,472,298 + +0.9 4,472,298 + +0.9 4,472,298 + +0.8 4,472,298 + -0.6 4,472,298 + -0.4 4,472,298 + +0.9 4,472,298 + -0.5 4,472,298 + -0.8 4,472,299 - -1.2 4,472,299 - -0.3 4,472,328 + -1.5 4,472,328 + -1.3 4,472,328 + -3.6 4,472,328 + -0.3 4,472,328 + -1.0 4,472,328 + +1.0 4,472,329 - +0.6 4,472,329 - -0.8 4,472,621 + -0.6 4,472,642 - -0.4 4,472,724 - OH686_21955 0.21 -2.8 4,472,724 - OH686_21955 0.21 +1.9 4,472,724 - OH686_21955 0.21 -0.3 4,473,005 + OH686_21955 0.80 +0.0 4,473,005 + OH686_21955 0.80 -2.2 4,473,108 + +0.0 4,473,108 + +0.5 4,473,108 + -0.6 4,473,108 + -0.3 4,473,108 + +0.2 4,473,108 + +0.7 4,473,109 - -1.8 4,473,109 - +0.2 4,473,109 - -0.4 4,473,109 - -0.5 4,473,109 - +0.1 4,473,109 - -0.6 4,473,379 + OH686_21960 0.43 -3.8 4,473,379 + OH686_21960 0.43 -0.2 4,473,379 + OH686_21960 0.43 -2.4 4,473,379 + OH686_21960 0.43 -4.3 4,473,380 - OH686_21960 0.43 -1.0 4,473,380 - OH686_21960 0.43 -2.0 4,473,380 - OH686_21960 0.43 -1.3 4,473,380 - OH686_21960 0.43 -2.4 4,473,380 - OH686_21960 0.43 -3.4 4,473,762 - -2.5 4,473,765 + +1.8 4,473,854 + +0.0 4,473,863 + +0.0 4,473,863 + -1.2 4,473,863 + -0.1 4,473,863 + -0.3 4,473,863 + -0.0 4,473,863 + -2.6 4,473,863 + -1.2 4,473,863 + -1.7 4,473,864 - -0.3 4,473,864 - -1.2 4,473,864 - -1.2 4,473,864 - +1.1 4,473,864 - +1.3 4,473,864 - -0.1 4,473,869 + +1.1 4,473,869 + -0.3 4,473,870 - -0.9 4,473,870 - -1.0 4,473,870 - -2.8 4,473,870 - -0.2 4,473,873 + -1.1 4,473,873 + +2.0 4,473,873 + -0.5 4,473,873 + -0.4 4,473,873 + -1.0 4,473,874 - -0.2 4,473,874 - -0.2 4,473,874 - -0.2
Or see this region's nucleotide sequence