Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_13320 and OH686_13325 are separated by 120 nucleotides OH686_13325 and OH686_13330 overlap by 8 nucleotides
OH686_13320: OH686_13320 - LysR-family transcriptional regulator, at 2,800,845 to 2,801,756
_13320
OH686_13325: OH686_13325 - Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake, at 2,801,877 to 2,803,199
_13325
OH686_13330: OH686_13330 - Signal transduction histidine kinase regulating C4-dicarboxylate transport system , at 2,803,192 to 2,805,060
_13330
Position (kb)
2801
2802
2803
2804 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2801.007 kb on - strand, within OH686_13320 at 2801.289 kb on + strand, within OH686_13320 at 2801.290 kb on - strand, within OH686_13320 at 2801.290 kb on - strand, within OH686_13320 at 2801.290 kb on - strand, within OH686_13320 at 2801.290 kb on - strand, within OH686_13320 at 2801.292 kb on + strand, within OH686_13320 at 2801.292 kb on + strand, within OH686_13320 at 2801.292 kb on + strand, within OH686_13320 at 2801.292 kb on + strand, within OH686_13320 at 2801.293 kb on - strand, within OH686_13320 at 2801.293 kb on - strand, within OH686_13320 at 2801.293 kb on - strand, within OH686_13320 at 2801.293 kb on - strand, within OH686_13320 at 2801.293 kb on - strand, within OH686_13320 at 2801.293 kb on - strand, within OH686_13320 at 2801.442 kb on + strand, within OH686_13320 at 2801.443 kb on - strand, within OH686_13320 at 2801.443 kb on - strand, within OH686_13320 at 2801.517 kb on + strand, within OH686_13320 at 2801.518 kb on - strand, within OH686_13320 at 2801.518 kb on - strand, within OH686_13320 at 2801.673 kb on + strand at 2801.673 kb on + strand at 2801.755 kb on - strand at 2801.755 kb on - strand at 2801.755 kb on - strand at 2801.795 kb on + strand at 2801.796 kb on - strand at 2801.796 kb on - strand at 2801.796 kb on - strand at 2801.797 kb on + strand at 2801.797 kb on + strand at 2801.798 kb on - strand at 2801.846 kb on - strand at 2801.846 kb on - strand at 2801.878 kb on + strand at 2801.878 kb on + strand at 2801.879 kb on - strand at 2801.879 kb on - strand at 2801.879 kb on - strand at 2801.887 kb on + strand at 2801.887 kb on + strand at 2801.887 kb on + strand at 2801.888 kb on - strand at 2801.888 kb on - strand at 2801.888 kb on - strand at 2801.888 kb on - strand at 2801.888 kb on - strand at 2801.888 kb on - strand at 2801.888 kb on - strand at 2802.286 kb on + strand, within OH686_13325 at 2802.287 kb on - strand, within OH686_13325 at 2802.289 kb on + strand, within OH686_13325 at 2802.289 kb on + strand, within OH686_13325 at 2802.289 kb on + strand, within OH686_13325 at 2802.289 kb on + strand, within OH686_13325 at 2802.289 kb on + strand, within OH686_13325 at 2802.289 kb on + strand, within OH686_13325 at 2802.289 kb on + strand, within OH686_13325 at 2802.290 kb on - strand, within OH686_13325 at 2802.290 kb on - strand, within OH686_13325 at 2802.290 kb on - strand, within OH686_13325 at 2802.290 kb on - strand, within OH686_13325 at 2802.290 kb on - strand, within OH686_13325 at 2802.290 kb on - strand, within OH686_13325 at 2802.417 kb on + strand, within OH686_13325 at 2802.417 kb on + strand, within OH686_13325 at 2802.901 kb on + strand, within OH686_13325 at 2802.901 kb on + strand, within OH686_13325 at 2803.047 kb on + strand, within OH686_13325 at 2803.047 kb on + strand, within OH686_13325 at 2803.047 kb on + strand, within OH686_13325 at 2803.047 kb on + strand, within OH686_13325 at 2803.048 kb on - strand, within OH686_13325 at 2803.048 kb on - strand, within OH686_13325 at 2803.048 kb on - strand, within OH686_13325 at 2803.048 kb on - strand, within OH686_13325 at 2803.048 kb on - strand, within OH686_13325 at 2803.048 kb on - strand, within OH686_13325 at 2803.179 kb on + strand at 2803.179 kb on + strand at 2803.179 kb on + strand at 2803.180 kb on - strand at 2803.180 kb on - strand at 2803.180 kb on - strand at 2804.163 kb on + strand, within OH686_13330 at 2804.163 kb on + strand, within OH686_13330 at 2804.163 kb on + strand, within OH686_13330 at 2804.164 kb on - strand, within OH686_13330 at 2804.164 kb on - strand, within OH686_13330 at 2804.164 kb on - strand, within OH686_13330
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 2,801,007 - OH686_13320 0.18 -1.5 2,801,289 + OH686_13320 0.49 -0.7 2,801,290 - OH686_13320 0.49 -0.5 2,801,290 - OH686_13320 0.49 -0.0 2,801,290 - OH686_13320 0.49 -0.9 2,801,290 - OH686_13320 0.49 +1.6 2,801,292 + OH686_13320 0.49 -1.5 2,801,292 + OH686_13320 0.49 +1.5 2,801,292 + OH686_13320 0.49 -0.2 2,801,292 + OH686_13320 0.49 +0.2 2,801,293 - OH686_13320 0.49 -0.1 2,801,293 - OH686_13320 0.49 -0.8 2,801,293 - OH686_13320 0.49 +1.0 2,801,293 - OH686_13320 0.49 -1.8 2,801,293 - OH686_13320 0.49 -0.7 2,801,293 - OH686_13320 0.49 -1.7 2,801,442 + OH686_13320 0.65 -1.9 2,801,443 - OH686_13320 0.66 -2.3 2,801,443 - OH686_13320 0.66 +1.1 2,801,517 + OH686_13320 0.74 -1.0 2,801,518 - OH686_13320 0.74 -1.6 2,801,518 - OH686_13320 0.74 -0.4 2,801,673 + +1.7 2,801,673 + -0.5 2,801,755 - +0.5 2,801,755 - -1.5 2,801,755 - +0.4 2,801,795 + -0.4 2,801,796 - +0.6 2,801,796 - +1.4 2,801,796 - -1.8 2,801,797 + +0.4 2,801,797 + +0.1 2,801,798 - +1.1 2,801,846 - +0.2 2,801,846 - -0.7 2,801,878 + +0.7 2,801,878 + +1.1 2,801,879 - -0.4 2,801,879 - +1.5 2,801,879 - +0.6 2,801,887 + -0.2 2,801,887 + -0.2 2,801,887 + +2.6 2,801,888 - -2.5 2,801,888 - -1.8 2,801,888 - -0.0 2,801,888 - -1.7 2,801,888 - -0.7 2,801,888 - -1.5 2,801,888 - +0.6 2,802,286 + OH686_13325 0.31 +0.0 2,802,287 - OH686_13325 0.31 -1.8 2,802,289 + OH686_13325 0.31 +0.3 2,802,289 + OH686_13325 0.31 -0.8 2,802,289 + OH686_13325 0.31 +1.1 2,802,289 + OH686_13325 0.31 -1.1 2,802,289 + OH686_13325 0.31 -0.4 2,802,289 + OH686_13325 0.31 -0.9 2,802,289 + OH686_13325 0.31 -2.7 2,802,290 - OH686_13325 0.31 +0.8 2,802,290 - OH686_13325 0.31 +0.5 2,802,290 - OH686_13325 0.31 -1.7 2,802,290 - OH686_13325 0.31 -0.8 2,802,290 - OH686_13325 0.31 +3.1 2,802,290 - OH686_13325 0.31 -2.6 2,802,417 + OH686_13325 0.41 -1.2 2,802,417 + OH686_13325 0.41 -0.5 2,802,901 + OH686_13325 0.77 -0.5 2,802,901 + OH686_13325 0.77 -0.6 2,803,047 + OH686_13325 0.88 -0.0 2,803,047 + OH686_13325 0.88 -1.0 2,803,047 + OH686_13325 0.88 -1.5 2,803,047 + OH686_13325 0.88 -0.7 2,803,048 - OH686_13325 0.89 -0.1 2,803,048 - OH686_13325 0.89 -2.1 2,803,048 - OH686_13325 0.89 +0.9 2,803,048 - OH686_13325 0.89 +0.4 2,803,048 - OH686_13325 0.89 +0.2 2,803,048 - OH686_13325 0.89 -0.4 2,803,179 + -1.2 2,803,179 + -1.9 2,803,179 + -0.2 2,803,180 - -1.3 2,803,180 - -1.6 2,803,180 - -1.6 2,804,163 + OH686_13330 0.52 -0.6 2,804,163 + OH686_13330 0.52 -2.2 2,804,163 + OH686_13330 0.52 -0.2 2,804,164 - OH686_13330 0.52 -1.1 2,804,164 - OH686_13330 0.52 +1.0 2,804,164 - OH686_13330 0.52 +0.9
Or see this region's nucleotide sequence