Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_03635 and OH686_03640 are separated by 147 nucleotides OH686_03640 and OH686_03645 are separated by 108 nucleotides OH686_03645 and OH686_03650 are separated by 92 nucleotides
OH686_03635: OH686_03635 - endopeptidase La, at 752,012 to 754,408
_03635
OH686_03640: OH686_03640 - ATP-dependent Clp protease, ATP-binding subunit ClpX, at 754,556 to 755,836
_03640
OH686_03645: OH686_03645 - ATP-dependent Clp endopeptidase, proteolytic subunit ClpP, at 755,945 to 756,586
_03645
OH686_03650: OH686_03650 - trigger factor, at 756,679 to 757,989
_03650
Position (kb) 754
755
756 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 753.631 kb on + strand, within OH686_03635 at 753.631 kb on + strand, within OH686_03635 at 753.632 kb on - strand, within OH686_03635 at 753.632 kb on - strand, within OH686_03635 at 753.632 kb on - strand, within OH686_03635 at 753.735 kb on + strand, within OH686_03635 at 753.735 kb on + strand, within OH686_03635 at 753.736 kb on - strand, within OH686_03635 at 753.738 kb on + strand, within OH686_03635 at 753.738 kb on + strand, within OH686_03635 at 753.739 kb on - strand, within OH686_03635 at 753.739 kb on - strand, within OH686_03635 at 753.739 kb on - strand, within OH686_03635 at 753.739 kb on - strand, within OH686_03635 at 753.995 kb on + strand, within OH686_03635 at 753.995 kb on + strand, within OH686_03635 at 753.995 kb on + strand, within OH686_03635 at 753.995 kb on + strand, within OH686_03635 at 753.995 kb on + strand, within OH686_03635 at 753.995 kb on + strand, within OH686_03635 at 753.995 kb on + strand, within OH686_03635 at 753.996 kb on - strand, within OH686_03635 at 753.996 kb on - strand, within OH686_03635 at 753.996 kb on - strand, within OH686_03635 at 753.996 kb on - strand, within OH686_03635 at 753.996 kb on - strand, within OH686_03635 at 753.996 kb on - strand, within OH686_03635 at 753.996 kb on - strand, within OH686_03635 at 753.996 kb on - strand, within OH686_03635 at 753.996 kb on - strand, within OH686_03635 at 753.996 kb on - strand, within OH686_03635 at 753.999 kb on + strand, within OH686_03635 at 753.999 kb on + strand, within OH686_03635 at 753.999 kb on + strand, within OH686_03635 at 753.999 kb on + strand, within OH686_03635 at 753.999 kb on + strand, within OH686_03635 at 754.000 kb on - strand, within OH686_03635 at 754.000 kb on - strand, within OH686_03635 at 754.000 kb on - strand, within OH686_03635 at 754.216 kb on - strand at 754.357 kb on - strand at 754.421 kb on - strand at 754.454 kb on - strand at 754.466 kb on - strand at 754.466 kb on - strand at 754.548 kb on + strand at 754.599 kb on + strand at 754.599 kb on + strand at 754.600 kb on - strand at 754.600 kb on - strand at 754.684 kb on - strand, within OH686_03640 at 755.289 kb on + strand, within OH686_03640 at 755.315 kb on + strand, within OH686_03640 at 755.315 kb on + strand, within OH686_03640 at 755.316 kb on - strand, within OH686_03640 at 755.316 kb on - strand, within OH686_03640 at 755.322 kb on + strand, within OH686_03640 at 755.604 kb on + strand, within OH686_03640 at 755.850 kb on + strand at 756.245 kb on - strand, within OH686_03645 at 756.352 kb on - strand, within OH686_03645 at 756.396 kb on - strand, within OH686_03645 at 756.605 kb on - strand at 756.605 kb on - strand at 756.605 kb on - strand at 756.607 kb on + strand at 756.608 kb on - strand at 756.608 kb on - strand at 756.608 kb on - strand at 756.608 kb on - strand at 756.630 kb on - strand at 756.630 kb on - strand at 756.630 kb on - strand at 756.630 kb on - strand at 756.630 kb on - strand at 756.652 kb on - strand at 756.652 kb on - strand at 756.652 kb on - strand at 756.652 kb on - strand at 756.652 kb on - strand at 756.652 kb on - strand at 756.652 kb on - strand at 756.766 kb on - strand at 756.766 kb on - strand at 756.770 kb on - strand at 756.770 kb on - strand at 756.827 kb on + strand, within OH686_03650 at 756.827 kb on + strand, within OH686_03650 at 756.827 kb on + strand, within OH686_03650 at 756.828 kb on - strand, within OH686_03650 at 756.828 kb on - strand, within OH686_03650 at 756.828 kb on - strand, within OH686_03650 at 756.828 kb on - strand, within OH686_03650 at 756.828 kb on - strand, within OH686_03650 at 756.828 kb on - strand, within OH686_03650 at 756.828 kb on - strand, within OH686_03650 at 756.828 kb on - strand, within OH686_03650 at 756.830 kb on + strand, within OH686_03650 at 756.830 kb on + strand, within OH686_03650
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 753,631 + OH686_03635 0.68 -1.3 753,631 + OH686_03635 0.68 -1.0 753,632 - OH686_03635 0.68 -0.3 753,632 - OH686_03635 0.68 -1.9 753,632 - OH686_03635 0.68 +0.0 753,735 + OH686_03635 0.72 -1.0 753,735 + OH686_03635 0.72 -1.0 753,736 - OH686_03635 0.72 +0.0 753,738 + OH686_03635 0.72 -0.8 753,738 + OH686_03635 0.72 +0.0 753,739 - OH686_03635 0.72 -0.6 753,739 - OH686_03635 0.72 -0.3 753,739 - OH686_03635 0.72 -0.6 753,739 - OH686_03635 0.72 +0.7 753,995 + OH686_03635 0.83 -0.6 753,995 + OH686_03635 0.83 -1.6 753,995 + OH686_03635 0.83 -1.6 753,995 + OH686_03635 0.83 +0.6 753,995 + OH686_03635 0.83 -0.3 753,995 + OH686_03635 0.83 +0.0 753,995 + OH686_03635 0.83 -1.1 753,996 - OH686_03635 0.83 -1.4 753,996 - OH686_03635 0.83 -1.7 753,996 - OH686_03635 0.83 -1.7 753,996 - OH686_03635 0.83 -0.3 753,996 - OH686_03635 0.83 -1.0 753,996 - OH686_03635 0.83 -1.9 753,996 - OH686_03635 0.83 -0.8 753,996 - OH686_03635 0.83 -1.7 753,996 - OH686_03635 0.83 +0.0 753,996 - OH686_03635 0.83 +0.0 753,999 + OH686_03635 0.83 -0.3 753,999 + OH686_03635 0.83 -1.0 753,999 + OH686_03635 0.83 -1.4 753,999 + OH686_03635 0.83 -0.6 753,999 + OH686_03635 0.83 -0.8 754,000 - OH686_03635 0.83 -0.3 754,000 - OH686_03635 0.83 -2.2 754,000 - OH686_03635 0.83 -0.3 754,216 - -1.7 754,357 - +0.0 754,421 - +0.3 754,454 - +0.2 754,466 - -0.2 754,466 - +0.4 754,548 + +1.3 754,599 + -0.7 754,599 + +0.0 754,600 - +0.2 754,600 - +0.1 754,684 - OH686_03640 0.10 +0.0 755,289 + OH686_03640 0.57 +0.0 755,315 + OH686_03640 0.59 +0.0 755,315 + OH686_03640 0.59 -0.7 755,316 - OH686_03640 0.59 -1.1 755,316 - OH686_03640 0.59 -0.8 755,322 + OH686_03640 0.60 -0.6 755,604 + OH686_03640 0.82 -0.3 755,850 + -0.3 756,245 - OH686_03645 0.47 +0.0 756,352 - OH686_03645 0.63 +0.0 756,396 - OH686_03645 0.70 +0.0 756,605 - +0.2 756,605 - -2.0 756,605 - -0.3 756,607 + +0.0 756,608 - +1.1 756,608 - -2.2 756,608 - +0.3 756,608 - -0.3 756,630 - +1.3 756,630 - -0.8 756,630 - +0.2 756,630 - +1.4 756,630 - +1.2 756,652 - -1.1 756,652 - +2.8 756,652 - -0.5 756,652 - -0.2 756,652 - -0.8 756,652 - -0.6 756,652 - -0.8 756,766 - +0.9 756,766 - -1.0 756,770 - +3.0 756,770 - +2.4 756,827 + OH686_03650 0.11 -0.1 756,827 + OH686_03650 0.11 +0.0 756,827 + OH686_03650 0.11 +1.6 756,828 - OH686_03650 0.11 -1.8 756,828 - OH686_03650 0.11 +0.2 756,828 - OH686_03650 0.11 +1.8 756,828 - OH686_03650 0.11 -1.4 756,828 - OH686_03650 0.11 +2.5 756,828 - OH686_03650 0.11 +1.5 756,828 - OH686_03650 0.11 +1.1 756,828 - OH686_03650 0.11 +1.4 756,830 + OH686_03650 0.12 +0.0 756,830 + OH686_03650 0.12 -0.7
Or see this region's nucleotide sequence