Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_01335 and OH686_01340 are separated by 239 nucleotides OH686_01340 and OH686_01345 are separated by 73 nucleotides OH686_01345 and OH686_01350 are separated by 77 nucleotides
OH686_01335: OH686_01335 - Inner membrane protein YbhQ, at 302,762 to 303,742
_01335
OH686_01340: OH686_01340 - hypothetical protein' product='hypothetical protein, at 303,982 to 304,353
_01340
OH686_01345: OH686_01345 - hypothetical protein' product='hypothetical protein, at 304,427 to 304,768
_01345
OH686_01350: OH686_01350 - hypothetical protein' product='hypothetical protein, at 304,846 to 305,373
_01350
Position (kb) 303
304
305 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 302.990 kb on + strand, within OH686_01335 at 302.990 kb on + strand, within OH686_01335 at 302.990 kb on + strand, within OH686_01335 at 302.990 kb on + strand, within OH686_01335 at 302.991 kb on - strand, within OH686_01335 at 302.991 kb on - strand, within OH686_01335 at 302.991 kb on - strand, within OH686_01335 at 302.991 kb on - strand, within OH686_01335 at 302.991 kb on - strand, within OH686_01335 at 303.022 kb on - strand, within OH686_01335 at 303.022 kb on - strand, within OH686_01335 at 303.045 kb on - strand, within OH686_01335 at 303.104 kb on + strand, within OH686_01335 at 303.105 kb on - strand, within OH686_01335 at 303.179 kb on + strand, within OH686_01335 at 303.299 kb on + strand, within OH686_01335 at 303.464 kb on + strand, within OH686_01335 at 303.464 kb on + strand, within OH686_01335 at 303.465 kb on - strand, within OH686_01335 at 303.465 kb on - strand, within OH686_01335 at 303.510 kb on + strand, within OH686_01335 at 303.510 kb on + strand, within OH686_01335 at 303.510 kb on + strand, within OH686_01335 at 303.626 kb on + strand, within OH686_01335 at 303.626 kb on + strand, within OH686_01335 at 303.626 kb on + strand, within OH686_01335 at 303.626 kb on + strand, within OH686_01335 at 303.626 kb on + strand, within OH686_01335 at 303.626 kb on + strand, within OH686_01335 at 303.627 kb on - strand, within OH686_01335 at 303.627 kb on - strand, within OH686_01335 at 303.627 kb on - strand, within OH686_01335 at 303.627 kb on - strand, within OH686_01335 at 303.627 kb on - strand, within OH686_01335 at 303.662 kb on + strand at 303.663 kb on - strand at 303.663 kb on - strand at 303.791 kb on - strand at 303.865 kb on - strand at 303.871 kb on + strand at 303.871 kb on + strand at 303.871 kb on + strand at 303.907 kb on + strand at 303.950 kb on + strand at 303.971 kb on + strand at 303.975 kb on + strand at 303.975 kb on + strand at 303.978 kb on - strand at 303.981 kb on + strand at 303.995 kb on + strand at 304.017 kb on + strand at 304.024 kb on + strand, within OH686_01340 at 304.034 kb on + strand, within OH686_01340 at 304.035 kb on - strand, within OH686_01340 at 304.070 kb on + strand, within OH686_01340 at 304.070 kb on + strand, within OH686_01340 at 304.074 kb on + strand, within OH686_01340 at 304.106 kb on + strand, within OH686_01340 at 304.205 kb on - strand, within OH686_01340 at 304.208 kb on + strand, within OH686_01340 at 304.223 kb on + strand, within OH686_01340 at 304.300 kb on - strand, within OH686_01340 at 304.313 kb on - strand, within OH686_01340 at 304.401 kb on + strand at 304.435 kb on - strand at 304.520 kb on + strand, within OH686_01345 at 304.521 kb on - strand, within OH686_01345 at 304.563 kb on + strand, within OH686_01345 at 304.575 kb on + strand, within OH686_01345 at 304.612 kb on - strand, within OH686_01345 at 304.737 kb on - strand at 304.737 kb on - strand at 304.827 kb on + strand at 304.901 kb on + strand, within OH686_01350 at 304.968 kb on + strand, within OH686_01350 at 304.968 kb on + strand, within OH686_01350 at 305.014 kb on + strand, within OH686_01350 at 305.069 kb on + strand, within OH686_01350 at 305.097 kb on - strand, within OH686_01350 at 305.097 kb on - strand, within OH686_01350 at 305.147 kb on - strand, within OH686_01350 at 305.147 kb on - strand, within OH686_01350 at 305.197 kb on - strand, within OH686_01350 at 305.238 kb on - strand, within OH686_01350 at 305.249 kb on + strand, within OH686_01350 at 305.307 kb on + strand, within OH686_01350 at 305.307 kb on + strand, within OH686_01350 at 305.307 kb on + strand, within OH686_01350 at 305.307 kb on + strand, within OH686_01350 at 305.308 kb on - strand, within OH686_01350 at 305.308 kb on - strand, within OH686_01350 at 305.308 kb on - strand, within OH686_01350 at 305.308 kb on - strand, within OH686_01350 at 305.311 kb on + strand, within OH686_01350 at 305.311 kb on + strand, within OH686_01350 at 305.311 kb on + strand, within OH686_01350 at 305.311 kb on + strand, within OH686_01350 at 305.311 kb on + strand, within OH686_01350 at 305.312 kb on - strand, within OH686_01350 at 305.312 kb on - strand, within OH686_01350 at 305.312 kb on - strand, within OH686_01350
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 302,990 + OH686_01335 0.23 +2.1 302,990 + OH686_01335 0.23 -1.2 302,990 + OH686_01335 0.23 +0.5 302,990 + OH686_01335 0.23 +1.0 302,991 - OH686_01335 0.23 +2.0 302,991 - OH686_01335 0.23 +0.8 302,991 - OH686_01335 0.23 -0.5 302,991 - OH686_01335 0.23 -0.5 302,991 - OH686_01335 0.23 -0.4 303,022 - OH686_01335 0.27 -0.5 303,022 - OH686_01335 0.27 -0.5 303,045 - OH686_01335 0.29 -2.3 303,104 + OH686_01335 0.35 -0.1 303,105 - OH686_01335 0.35 +0.9 303,179 + OH686_01335 0.43 -0.6 303,299 + OH686_01335 0.55 -0.5 303,464 + OH686_01335 0.72 -0.7 303,464 + OH686_01335 0.72 +1.0 303,465 - OH686_01335 0.72 +0.8 303,465 - OH686_01335 0.72 -0.4 303,510 + OH686_01335 0.76 -1.0 303,510 + OH686_01335 0.76 +0.9 303,510 + OH686_01335 0.76 -0.2 303,626 + OH686_01335 0.88 -3.0 303,626 + OH686_01335 0.88 +0.7 303,626 + OH686_01335 0.88 +1.0 303,626 + OH686_01335 0.88 -2.3 303,626 + OH686_01335 0.88 +1.0 303,626 + OH686_01335 0.88 -0.0 303,627 - OH686_01335 0.88 -2.2 303,627 - OH686_01335 0.88 +0.8 303,627 - OH686_01335 0.88 -0.2 303,627 - OH686_01335 0.88 +0.6 303,627 - OH686_01335 0.88 -0.1 303,662 + -2.7 303,663 - +2.8 303,663 - +1.5 303,791 - +0.5 303,865 - +0.2 303,871 + -1.0 303,871 + +0.7 303,871 + +0.3 303,907 + +0.5 303,950 + -1.7 303,971 + -2.1 303,975 + -0.3 303,975 + +0.7 303,978 - +0.4 303,981 + +0.0 303,995 + +0.1 304,017 + +0.0 304,024 + OH686_01340 0.11 +0.5 304,034 + OH686_01340 0.14 -0.2 304,035 - OH686_01340 0.14 +0.0 304,070 + OH686_01340 0.24 -1.3 304,070 + OH686_01340 0.24 -0.5 304,074 + OH686_01340 0.25 -2.1 304,106 + OH686_01340 0.33 +0.2 304,205 - OH686_01340 0.60 +0.8 304,208 + OH686_01340 0.61 -0.5 304,223 + OH686_01340 0.65 -0.3 304,300 - OH686_01340 0.85 -1.4 304,313 - OH686_01340 0.89 +0.9 304,401 + +0.5 304,435 - +0.5 304,520 + OH686_01345 0.27 +0.8 304,521 - OH686_01345 0.27 -1.2 304,563 + OH686_01345 0.40 +0.2 304,575 + OH686_01345 0.43 +1.1 304,612 - OH686_01345 0.54 -1.1 304,737 - +0.0 304,737 - +0.2 304,827 + +0.0 304,901 + OH686_01350 0.10 -0.4 304,968 + OH686_01350 0.23 -0.9 304,968 + OH686_01350 0.23 +1.1 305,014 + OH686_01350 0.32 -1.8 305,069 + OH686_01350 0.42 -1.5 305,097 - OH686_01350 0.48 -2.1 305,097 - OH686_01350 0.48 -0.0 305,147 - OH686_01350 0.57 +0.3 305,147 - OH686_01350 0.57 -2.9 305,197 - OH686_01350 0.66 -1.4 305,238 - OH686_01350 0.74 +2.7 305,249 + OH686_01350 0.76 +0.3 305,307 + OH686_01350 0.87 +1.1 305,307 + OH686_01350 0.87 -1.7 305,307 + OH686_01350 0.87 +1.0 305,307 + OH686_01350 0.87 -0.2 305,308 - OH686_01350 0.88 +1.0 305,308 - OH686_01350 0.88 -0.1 305,308 - OH686_01350 0.88 -0.6 305,308 - OH686_01350 0.88 +0.4 305,311 + OH686_01350 0.88 -1.2 305,311 + OH686_01350 0.88 -2.5 305,311 + OH686_01350 0.88 +1.2 305,311 + OH686_01350 0.88 -2.1 305,311 + OH686_01350 0.88 +0.5 305,312 - OH686_01350 0.88 -2.1 305,312 - OH686_01350 0.88 -1.8 305,312 - OH686_01350 0.88 -1.4
Or see this region's nucleotide sequence