Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_02460 and PS417_02465 are separated by 63 nucleotides PS417_02465 and PS417_02470 overlap by 13 nucleotides PS417_02470 and PS417_02475 are separated by 15 nucleotides
PS417_02460: PS417_02460 - epoxyqueuosine reductase, at 562,616 to 563,680
_02460
PS417_02465: PS417_02465 - carbohydrate kinase, at 563,744 to 564,604
_02465
PS417_02470: PS417_02470 - ATPase, at 564,592 to 565,062
_02470
PS417_02475: PS417_02475 - N-acetylmuramoyl-L-alanine amidase, at 565,078 to 566,499
_02475
Position (kb) 563
564
565 Strain fitness (log2 ratio) -1
0
1
2 at 562.828 kb on + strand, within PS417_02460 at 562.828 kb on + strand, within PS417_02460 at 562.829 kb on - strand, within PS417_02460 at 562.829 kb on - strand, within PS417_02460 at 562.829 kb on - strand, within PS417_02460 at 563.041 kb on - strand, within PS417_02460 at 563.167 kb on - strand, within PS417_02460 at 563.190 kb on - strand, within PS417_02460 at 563.379 kb on + strand, within PS417_02460 at 563.380 kb on - strand, within PS417_02460 at 563.402 kb on + strand, within PS417_02460 at 563.434 kb on - strand, within PS417_02460 at 563.434 kb on - strand, within PS417_02460 at 563.517 kb on + strand, within PS417_02460 at 563.518 kb on - strand, within PS417_02460 at 563.518 kb on - strand, within PS417_02460 at 563.518 kb on - strand, within PS417_02460 at 563.713 kb on - strand at 563.775 kb on + strand at 563.776 kb on - strand at 563.776 kb on - strand at 563.776 kb on - strand at 563.776 kb on - strand at 563.776 kb on - strand at 563.776 kb on - strand at 563.862 kb on + strand, within PS417_02465 at 563.862 kb on + strand, within PS417_02465 at 563.862 kb on + strand, within PS417_02465 at 563.862 kb on + strand, within PS417_02465 at 563.863 kb on - strand, within PS417_02465 at 564.275 kb on - strand, within PS417_02465 at 564.465 kb on - strand, within PS417_02465 at 564.555 kb on + strand at 564.602 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 562,828 + PS417_02460 0.20 -1.2 562,828 + PS417_02460 0.20 -0.3 562,829 - PS417_02460 0.20 -0.2 562,829 - PS417_02460 0.20 -0.6 562,829 - PS417_02460 0.20 +0.5 563,041 - PS417_02460 0.40 -0.6 563,167 - PS417_02460 0.52 -0.9 563,190 - PS417_02460 0.54 -0.1 563,379 + PS417_02460 0.72 -0.1 563,380 - PS417_02460 0.72 +0.5 563,402 + PS417_02460 0.74 -0.1 563,434 - PS417_02460 0.77 -0.6 563,434 - PS417_02460 0.77 +0.3 563,517 + PS417_02460 0.85 +1.9 563,518 - PS417_02460 0.85 -0.1 563,518 - PS417_02460 0.85 -0.1 563,518 - PS417_02460 0.85 +0.2 563,713 - -0.2 563,775 + -0.3 563,776 - -0.1 563,776 - +0.6 563,776 - +0.1 563,776 - -0.6 563,776 - -0.6 563,776 - +0.6 563,862 + PS417_02465 0.14 -0.6 563,862 + PS417_02465 0.14 -0.9 563,862 + PS417_02465 0.14 -0.0 563,862 + PS417_02465 0.14 -0.3 563,863 - PS417_02465 0.14 -0.8 564,275 - PS417_02465 0.62 -0.3 564,465 - PS417_02465 0.84 -1.7 564,555 + +0.1 564,602 + -0.7
Or see this region's nucleotide sequence