Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0064
Experiment: m.b. Paraquat dichloride 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Paraquat dichloride 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
62,818 | + | Echvi_0063 | 0.67 | -0.1 | |
62,830 | - | Echvi_0063 | 0.68 | +0.6 | |
62,886 | + | Echvi_0063 | 0.72 | -1.2 | |
62,887 | - | Echvi_0063 | 0.73 | -0.5 | |
62,887 | - | Echvi_0063 | 0.73 | +0.0 | |
62,951 | + | Echvi_0063 | 0.78 | +1.4 | |
62,960 | + | Echvi_0063 | 0.79 | -0.3 | |
62,960 | + | Echvi_0063 | 0.79 | +0.1 | |
62,961 | - | Echvi_0063 | 0.79 | +0.6 | |
62,961 | - | Echvi_0063 | 0.79 | -0.7 | |
63,004 | + | Echvi_0063 | 0.83 | +0.7 | |
63,005 | - | Echvi_0063 | 0.83 | -0.1 | |
63,030 | + | Echvi_0063 | 0.85 | +0.8 | |
63,062 | + | Echvi_0063 | 0.88 | -0.1 | |
63,076 | + | Echvi_0063 | 0.89 | -0.3 | |
63,111 | + | +0.2 | |||
63,150 | + | +0.1 | |||
63,153 | + | -0.2 | |||
63,154 | - | +1.1 | |||
63,154 | - | -0.4 | |||
63,155 | + | -0.0 | |||
63,155 | + | -0.9 | |||
63,156 | - | +0.4 | |||
63,156 | - | +0.4 | |||
63,156 | - | +0.1 | |||
63,156 | - | +1.1 | |||
63,189 | + | +0.7 | |||
63,189 | + | +0.5 | |||
63,195 | + | +1.1 | |||
63,198 | + | -0.5 | |||
63,198 | + | +0.2 | |||
63,198 | + | -0.1 | |||
63,198 | + | -1.1 | |||
63,198 | + | -0.0 | |||
63,198 | + | -0.4 | |||
63,199 | - | -0.8 | |||
63,220 | + | -0.2 | |||
63,227 | + | +1.1 | |||
63,466 | - | +0.7 | |||
63,517 | - | -0.3 | |||
63,517 | - | -0.3 | |||
63,579 | + | -0.7 | |||
63,580 | - | +0.4 | |||
63,737 | - | -0.1 |
Or see this region's nucleotide sequence