Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS30885 and ABIE40_RS30890 are separated by 125 nucleotides ABIE40_RS30890 and ABIE40_RS30895 are separated by 410 nucleotides ABIE40_RS30895 and ABIE40_RS30900 overlap by 4 nucleotides ABIE40_RS30900 and ABIE40_RS30905 overlap by 4 nucleotides
ABIE40_RS30885: ABIE40_RS30885 - DUF982 domain-containing protein, at 870,931 to 871,311
_RS30885
ABIE40_RS30890: ABIE40_RS30890 - hypothetical protein, at 871,437 to 871,724
_RS30890
ABIE40_RS30895: ABIE40_RS30895 - cytochrome o ubiquinol oxidase subunit IV, at 872,135 to 872,542
_RS30895
ABIE40_RS30900: ABIE40_RS30900 - cytochrome c oxidase subunit 3, at 872,539 to 873,234
_RS30900
ABIE40_RS30905: ABIE40_RS30905 - cbb3-type cytochrome c oxidase subunit I, at 873,231 to 875,243
_RS30905
Position (kb) 872
873 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 871.233 kb on + strand, within ABIE40_RS30885 at 871.511 kb on + strand, within ABIE40_RS30890 at 871.512 kb on - strand, within ABIE40_RS30890 at 871.512 kb on - strand, within ABIE40_RS30890 at 871.578 kb on + strand, within ABIE40_RS30890 at 871.649 kb on + strand, within ABIE40_RS30890 at 871.650 kb on - strand, within ABIE40_RS30890 at 871.656 kb on + strand, within ABIE40_RS30890 at 871.760 kb on + strand at 871.763 kb on + strand at 871.780 kb on + strand at 871.781 kb on - strand at 871.781 kb on - strand at 871.927 kb on - strand at 871.974 kb on + strand at 872.037 kb on - strand at 872.136 kb on + strand at 872.136 kb on + strand at 872.137 kb on - strand at 872.171 kb on - strand at 872.340 kb on - strand, within ABIE40_RS30895 at 872.376 kb on - strand, within ABIE40_RS30895 at 872.376 kb on - strand, within ABIE40_RS30895 at 872.451 kb on + strand, within ABIE40_RS30895 at 872.562 kb on - strand at 872.592 kb on + strand at 872.857 kb on + strand, within ABIE40_RS30900 at 872.857 kb on + strand, within ABIE40_RS30900 at 872.907 kb on + strand, within ABIE40_RS30900 at 872.907 kb on + strand, within ABIE40_RS30900 at 872.907 kb on + strand, within ABIE40_RS30900 at 872.907 kb on + strand, within ABIE40_RS30900 at 872.907 kb on + strand, within ABIE40_RS30900 at 872.908 kb on - strand, within ABIE40_RS30900 at 872.908 kb on - strand, within ABIE40_RS30900 at 872.908 kb on - strand, within ABIE40_RS30900 at 872.915 kb on + strand, within ABIE40_RS30900 at 872.915 kb on + strand, within ABIE40_RS30900 at 872.916 kb on - strand, within ABIE40_RS30900 at 872.974 kb on + strand, within ABIE40_RS30900 at 872.975 kb on - strand, within ABIE40_RS30900 at 873.206 kb on - strand at 873.207 kb on + strand at 873.207 kb on + strand at 873.413 kb on - strand at 873.413 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 871,233 + ABIE40_RS30885 0.79 -0.8 871,511 + ABIE40_RS30890 0.26 +0.9 871,512 - ABIE40_RS30890 0.26 -1.8 871,512 - ABIE40_RS30890 0.26 -0.1 871,578 + ABIE40_RS30890 0.49 -1.0 871,649 + ABIE40_RS30890 0.74 +1.1 871,650 - ABIE40_RS30890 0.74 -1.3 871,656 + ABIE40_RS30890 0.76 -1.5 871,760 + -0.9 871,763 + -0.9 871,780 + +1.7 871,781 - +1.0 871,781 - -1.1 871,927 - -0.4 871,974 + +0.1 872,037 - -2.7 872,136 + +0.5 872,136 + +0.1 872,137 - +0.2 872,171 - -0.0 872,340 - ABIE40_RS30895 0.50 +0.1 872,376 - ABIE40_RS30895 0.59 -1.9 872,376 - ABIE40_RS30895 0.59 -4.5 872,451 + ABIE40_RS30895 0.77 +1.3 872,562 - -2.5 872,592 + -0.0 872,857 + ABIE40_RS30900 0.46 -0.0 872,857 + ABIE40_RS30900 0.46 +0.6 872,907 + ABIE40_RS30900 0.53 +2.1 872,907 + ABIE40_RS30900 0.53 +1.9 872,907 + ABIE40_RS30900 0.53 +0.8 872,907 + ABIE40_RS30900 0.53 -0.6 872,907 + ABIE40_RS30900 0.53 -0.2 872,908 - ABIE40_RS30900 0.53 -0.3 872,908 - ABIE40_RS30900 0.53 -0.9 872,908 - ABIE40_RS30900 0.53 +0.1 872,915 + ABIE40_RS30900 0.54 -0.3 872,915 + ABIE40_RS30900 0.54 +0.5 872,916 - ABIE40_RS30900 0.54 -0.1 872,974 + ABIE40_RS30900 0.62 -0.8 872,975 - ABIE40_RS30900 0.63 -0.7 873,206 - +0.2 873,207 + -0.5 873,207 + +0.1 873,413 - +0.2 873,413 - -0.8
Or see this region's nucleotide sequence