Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS30705 and ABIE40_RS30710 are separated by 12 nucleotides ABIE40_RS30710 and ABIE40_RS30715 are separated by 8 nucleotides ABIE40_RS30715 and ABIE40_RS30720 overlap by 47 nucleotides ABIE40_RS30720 and ABIE40_RS30725 are separated by 107 nucleotides
ABIE40_RS30705: ABIE40_RS30705 - hypothetical protein, at 832,370 to 832,585
_RS30705
ABIE40_RS30710: ABIE40_RS30710 - hypothetical protein, at 832,598 to 832,774
_RS30710
ABIE40_RS30715: ABIE40_RS30715 - hypothetical protein, at 832,783 to 832,971
_RS30715
ABIE40_RS30720: ABIE40_RS30720 - hypothetical protein, at 832,925 to 833,455
_RS30720
ABIE40_RS30725: ABIE40_RS30725 - NADH-quinone oxidoreductase subunit C, at 833,563 to 834,186
_RS30725
Position (kb)
832
833 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 831.436 kb on + strand at 831.437 kb on - strand at 831.587 kb on + strand at 831.587 kb on + strand at 831.587 kb on + strand at 831.588 kb on - strand at 831.588 kb on - strand at 831.597 kb on + strand at 831.597 kb on + strand at 831.617 kb on - strand at 831.627 kb on + strand at 831.628 kb on - strand at 831.669 kb on + strand at 831.669 kb on + strand at 831.670 kb on - strand at 831.814 kb on + strand at 831.856 kb on + strand at 831.856 kb on + strand at 831.857 kb on - strand at 831.857 kb on - strand at 831.879 kb on - strand at 831.982 kb on + strand at 831.983 kb on - strand at 831.983 kb on - strand at 831.989 kb on - strand at 831.989 kb on - strand at 832.167 kb on + strand at 832.177 kb on - strand at 832.177 kb on - strand at 832.201 kb on + strand at 832.202 kb on - strand at 832.457 kb on - strand, within ABIE40_RS30705 at 832.492 kb on + strand, within ABIE40_RS30705 at 832.493 kb on - strand, within ABIE40_RS30705 at 832.551 kb on - strand, within ABIE40_RS30705 at 832.741 kb on + strand, within ABIE40_RS30710 at 832.758 kb on - strand at 832.782 kb on + strand at 832.783 kb on - strand at 832.783 kb on - strand at 832.797 kb on + strand at 832.798 kb on - strand at 832.969 kb on + strand at 832.970 kb on - strand at 833.141 kb on - strand, within ABIE40_RS30720 at 833.252 kb on - strand, within ABIE40_RS30720 at 833.414 kb on - strand at 833.465 kb on - strand at 833.538 kb on + strand at 833.574 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 831,436 + -0.6 831,437 - -0.6 831,587 + -0.5 831,587 + +0.5 831,587 + +0.7 831,588 - -1.0 831,588 - -0.5 831,597 + +0.7 831,597 + +0.3 831,617 - -0.6 831,627 + -0.6 831,628 - +0.5 831,669 + -0.5 831,669 + -1.7 831,670 - -1.1 831,814 + -0.4 831,856 + -0.3 831,856 + +1.5 831,857 - -0.9 831,857 - -1.0 831,879 - +1.6 831,982 + -1.8 831,983 - +0.1 831,983 - +0.7 831,989 - +1.7 831,989 - +0.7 832,167 + -1.2 832,177 - -0.1 832,177 - +0.0 832,201 + -1.3 832,202 - -0.5 832,457 - ABIE40_RS30705 0.40 +0.3 832,492 + ABIE40_RS30705 0.56 -1.6 832,493 - ABIE40_RS30705 0.57 -0.9 832,551 - ABIE40_RS30705 0.84 -1.3 832,741 + ABIE40_RS30710 0.81 +2.3 832,758 - -1.1 832,782 + +0.5 832,783 - -0.4 832,783 - -0.8 832,797 + -0.3 832,798 - +0.1 832,969 + +0.2 832,970 - -1.0 833,141 - ABIE40_RS30720 0.41 -0.2 833,252 - ABIE40_RS30720 0.62 -0.2 833,414 - +0.5 833,465 - +0.9 833,538 + +0.1 833,574 + -2.3
Or see this region's nucleotide sequence