Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS29925 and ABIE40_RS29930 are separated by 158 nucleotides ABIE40_RS29930 and ABIE40_RS29935 are separated by 416 nucleotides ABIE40_RS29935 and ABIE40_RS29940 are separated by 129 nucleotides ABIE40_RS29940 and ABIE40_RS29945 are separated by 251 nucleotides
ABIE40_RS29925: ABIE40_RS29925 - nucleotidyl transferase AbiEii/AbiGii toxin family protein, at 676,093 to 677,010
_RS29925
ABIE40_RS29930: ABIE40_RS29930 - hypothetical protein, at 677,169 to 677,360
_RS29930
ABIE40_RS29935: ABIE40_RS29935 - aldehyde dehydrogenase (NADP(+)), at 677,777 to 679,300
_RS29935
ABIE40_RS29940: ABIE40_RS29940 - transcriptional regulator, at 679,430 to 679,981
_RS29940
ABIE40_RS29945: ABIE40_RS29945 - hypothetical protein, at 680,233 to 680,448
_RS29945
Position (kb) 677
678
679
680 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 676.783 kb on + strand, within ABIE40_RS29925 at 676.783 kb on + strand, within ABIE40_RS29925 at 676.784 kb on - strand, within ABIE40_RS29925 at 676.803 kb on - strand, within ABIE40_RS29925 at 677.013 kb on + strand at 677.013 kb on + strand at 677.014 kb on - strand at 677.071 kb on + strand at 677.071 kb on + strand at 677.071 kb on + strand at 677.072 kb on - strand at 677.072 kb on - strand at 677.072 kb on - strand at 677.072 kb on - strand at 677.072 kb on - strand at 677.084 kb on - strand at 677.134 kb on - strand at 677.164 kb on - strand at 677.193 kb on - strand, within ABIE40_RS29930 at 677.323 kb on + strand, within ABIE40_RS29930 at 677.323 kb on + strand, within ABIE40_RS29930 at 677.323 kb on + strand, within ABIE40_RS29930 at 677.323 kb on + strand, within ABIE40_RS29930 at 677.323 kb on + strand, within ABIE40_RS29930 at 677.323 kb on + strand, within ABIE40_RS29930 at 677.324 kb on - strand, within ABIE40_RS29930 at 677.324 kb on - strand, within ABIE40_RS29930 at 677.327 kb on + strand, within ABIE40_RS29930 at 677.327 kb on + strand, within ABIE40_RS29930 at 677.382 kb on + strand at 677.392 kb on + strand at 677.392 kb on + strand at 677.392 kb on + strand at 677.396 kb on + strand at 677.397 kb on - strand at 677.489 kb on - strand at 677.489 kb on - strand at 677.489 kb on - strand at 677.505 kb on + strand at 677.505 kb on + strand at 677.533 kb on - strand at 677.573 kb on + strand at 677.574 kb on - strand at 677.648 kb on + strand at 677.649 kb on - strand at 677.681 kb on - strand at 677.681 kb on - strand at 677.681 kb on - strand at 677.697 kb on - strand at 677.869 kb on + strand at 677.869 kb on + strand at 678.104 kb on + strand, within ABIE40_RS29935 at 678.195 kb on + strand, within ABIE40_RS29935 at 678.196 kb on - strand, within ABIE40_RS29935 at 678.196 kb on - strand, within ABIE40_RS29935 at 678.461 kb on - strand, within ABIE40_RS29935 at 678.461 kb on - strand, within ABIE40_RS29935 at 678.553 kb on + strand, within ABIE40_RS29935 at 678.554 kb on - strand, within ABIE40_RS29935 at 678.554 kb on - strand, within ABIE40_RS29935 at 678.554 kb on - strand, within ABIE40_RS29935 at 678.664 kb on + strand, within ABIE40_RS29935 at 678.665 kb on - strand, within ABIE40_RS29935 at 678.665 kb on - strand, within ABIE40_RS29935 at 678.752 kb on + strand, within ABIE40_RS29935 at 678.752 kb on + strand, within ABIE40_RS29935 at 678.753 kb on - strand, within ABIE40_RS29935 at 679.083 kb on - strand, within ABIE40_RS29935 at 679.128 kb on + strand, within ABIE40_RS29935 at 679.129 kb on - strand, within ABIE40_RS29935 at 679.129 kb on - strand, within ABIE40_RS29935 at 679.129 kb on - strand, within ABIE40_RS29935 at 679.291 kb on + strand at 679.291 kb on + strand at 679.292 kb on - strand at 679.303 kb on + strand at 679.303 kb on + strand at 679.303 kb on + strand at 679.304 kb on - strand at 679.304 kb on - strand at 679.337 kb on + strand at 679.337 kb on + strand at 679.337 kb on + strand at 679.338 kb on - strand at 679.499 kb on + strand, within ABIE40_RS29940 at 679.500 kb on - strand, within ABIE40_RS29940 at 679.500 kb on - strand, within ABIE40_RS29940 at 679.663 kb on + strand, within ABIE40_RS29940 at 679.663 kb on + strand, within ABIE40_RS29940 at 679.663 kb on + strand, within ABIE40_RS29940 at 679.663 kb on + strand, within ABIE40_RS29940 at 679.663 kb on + strand, within ABIE40_RS29940 at 679.664 kb on - strand, within ABIE40_RS29940 at 679.664 kb on - strand, within ABIE40_RS29940 at 679.932 kb on + strand at 679.932 kb on + strand at 679.933 kb on - strand at 679.933 kb on - strand at 679.936 kb on + strand at 679.936 kb on + strand at 679.936 kb on + strand at 679.936 kb on + strand at 679.936 kb on + strand at 679.936 kb on + strand at 679.936 kb on + strand at 679.937 kb on - strand at 679.937 kb on - strand at 679.937 kb on - strand at 679.937 kb on - strand at 679.937 kb on - strand at 679.937 kb on - strand at 679.937 kb on - strand at 679.973 kb on + strand at 679.974 kb on - strand at 680.168 kb on + strand at 680.168 kb on + strand at 680.169 kb on - strand at 680.169 kb on - strand at 680.169 kb on - strand at 680.169 kb on - strand at 680.169 kb on - strand at 680.196 kb on + strand at 680.250 kb on + strand at 680.250 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 676,783 + ABIE40_RS29925 0.75 +0.2 676,783 + ABIE40_RS29925 0.75 -1.5 676,784 - ABIE40_RS29925 0.75 -0.0 676,803 - ABIE40_RS29925 0.77 +0.3 677,013 + +1.5 677,013 + -2.4 677,014 - -1.7 677,071 + +0.8 677,071 + +0.3 677,071 + -0.5 677,072 - -0.1 677,072 - +0.1 677,072 - +0.3 677,072 - +0.1 677,072 - -0.6 677,084 - +1.9 677,134 - +0.1 677,164 - -1.4 677,193 - ABIE40_RS29930 0.12 -0.4 677,323 + ABIE40_RS29930 0.80 -0.5 677,323 + ABIE40_RS29930 0.80 +1.1 677,323 + ABIE40_RS29930 0.80 -1.0 677,323 + ABIE40_RS29930 0.80 -1.4 677,323 + ABIE40_RS29930 0.80 -0.3 677,323 + ABIE40_RS29930 0.80 -0.5 677,324 - ABIE40_RS29930 0.81 -1.7 677,324 - ABIE40_RS29930 0.81 +0.4 677,327 + ABIE40_RS29930 0.82 -0.3 677,327 + ABIE40_RS29930 0.82 +0.1 677,382 + +0.3 677,392 + +0.9 677,392 + +0.3 677,392 + -0.8 677,396 + -0.4 677,397 - -2.7 677,489 - -0.1 677,489 - -0.9 677,489 - +2.2 677,505 + -0.4 677,505 + -0.1 677,533 - -0.1 677,573 + +0.1 677,574 - -1.0 677,648 + +0.7 677,649 - +0.3 677,681 - -1.3 677,681 - +0.5 677,681 - +0.3 677,697 - -0.7 677,869 + -2.0 677,869 + +1.3 678,104 + ABIE40_RS29935 0.21 -0.1 678,195 + ABIE40_RS29935 0.27 +0.0 678,196 - ABIE40_RS29935 0.27 -0.6 678,196 - ABIE40_RS29935 0.27 +0.5 678,461 - ABIE40_RS29935 0.45 +0.1 678,461 - ABIE40_RS29935 0.45 +0.5 678,553 + ABIE40_RS29935 0.51 -0.4 678,554 - ABIE40_RS29935 0.51 +0.7 678,554 - ABIE40_RS29935 0.51 +2.9 678,554 - ABIE40_RS29935 0.51 +0.7 678,664 + ABIE40_RS29935 0.58 +1.8 678,665 - ABIE40_RS29935 0.58 +0.2 678,665 - ABIE40_RS29935 0.58 +0.1 678,752 + ABIE40_RS29935 0.64 -0.5 678,752 + ABIE40_RS29935 0.64 -0.3 678,753 - ABIE40_RS29935 0.64 +0.0 679,083 - ABIE40_RS29935 0.86 -0.1 679,128 + ABIE40_RS29935 0.89 +0.4 679,129 - ABIE40_RS29935 0.89 +1.2 679,129 - ABIE40_RS29935 0.89 -0.1 679,129 - ABIE40_RS29935 0.89 +0.9 679,291 + +0.0 679,291 + -0.8 679,292 - +0.3 679,303 + +0.8 679,303 + +0.3 679,303 + +1.8 679,304 - +0.2 679,304 - -1.1 679,337 + +0.1 679,337 + -0.8 679,337 + -0.4 679,338 - -0.1 679,499 + ABIE40_RS29940 0.12 +0.4 679,500 - ABIE40_RS29940 0.13 -0.3 679,500 - ABIE40_RS29940 0.13 +0.7 679,663 + ABIE40_RS29940 0.42 +1.1 679,663 + ABIE40_RS29940 0.42 +0.2 679,663 + ABIE40_RS29940 0.42 -0.5 679,663 + ABIE40_RS29940 0.42 -0.1 679,663 + ABIE40_RS29940 0.42 -1.8 679,664 - ABIE40_RS29940 0.42 +1.4 679,664 - ABIE40_RS29940 0.42 -0.0 679,932 + +0.2 679,932 + -0.4 679,933 - -0.2 679,933 - -1.1 679,936 + +0.6 679,936 + -0.1 679,936 + +1.5 679,936 + +0.7 679,936 + +0.6 679,936 + -0.7 679,936 + +0.5 679,937 - +0.9 679,937 - +1.5 679,937 - -1.8 679,937 - -0.7 679,937 - -0.3 679,937 - -0.8 679,937 - +1.5 679,973 + +0.3 679,974 - -0.5 680,168 + -0.2 680,168 + +0.3 680,169 - +1.9 680,169 - +0.3 680,169 - +0.6 680,169 - +0.7 680,169 - +0.3 680,196 + -0.1 680,250 + +0.3 680,250 + +0.5
Or see this region's nucleotide sequence