Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS23965 and ABIE40_RS23970 are separated by 71 nucleotides ABIE40_RS23970 and ABIE40_RS23975 overlap by 4 nucleotides ABIE40_RS23975 and ABIE40_RS23980 are separated by 29 nucleotides
ABIE40_RS23965: ABIE40_RS23965 - transporter substrate-binding domain-containing protein, at 935,739 to 936,533
_RS23965
ABIE40_RS23970: ABIE40_RS23970 - amino acid ABC transporter permease, at 936,605 to 937,279
_RS23970
ABIE40_RS23975: ABIE40_RS23975 - amino acid ABC transporter ATP-binding protein, at 937,276 to 938,013
_RS23975
ABIE40_RS23980: ABIE40_RS23980 - cysteine desulfurase-like protein, at 938,043 to 939,302
_RS23980
Position (kb) 936
937
938 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 935.718 kb on + strand at 935.718 kb on + strand at 935.719 kb on - strand at 935.719 kb on - strand at 935.736 kb on + strand at 935.737 kb on - strand at 935.737 kb on - strand at 935.737 kb on - strand at 935.737 kb on - strand at 935.737 kb on - strand at 935.737 kb on - strand at 935.737 kb on - strand at 935.837 kb on + strand, within ABIE40_RS23965 at 936.063 kb on + strand, within ABIE40_RS23965 at 936.063 kb on + strand, within ABIE40_RS23965 at 936.064 kb on - strand, within ABIE40_RS23965 at 936.064 kb on - strand, within ABIE40_RS23965 at 936.064 kb on - strand, within ABIE40_RS23965 at 936.064 kb on - strand, within ABIE40_RS23965 at 936.064 kb on - strand, within ABIE40_RS23965 at 936.064 kb on - strand, within ABIE40_RS23965 at 936.064 kb on - strand, within ABIE40_RS23965 at 936.066 kb on + strand, within ABIE40_RS23965 at 936.066 kb on + strand, within ABIE40_RS23965 at 936.067 kb on - strand, within ABIE40_RS23965 at 936.067 kb on - strand, within ABIE40_RS23965 at 936.189 kb on - strand, within ABIE40_RS23965 at 936.198 kb on + strand, within ABIE40_RS23965 at 936.198 kb on + strand, within ABIE40_RS23965 at 936.198 kb on + strand, within ABIE40_RS23965 at 936.199 kb on - strand, within ABIE40_RS23965 at 936.276 kb on + strand, within ABIE40_RS23965 at 936.276 kb on + strand, within ABIE40_RS23965 at 936.276 kb on + strand, within ABIE40_RS23965 at 936.276 kb on + strand, within ABIE40_RS23965 at 936.277 kb on - strand, within ABIE40_RS23965 at 936.278 kb on + strand, within ABIE40_RS23965 at 936.278 kb on + strand, within ABIE40_RS23965 at 936.278 kb on + strand, within ABIE40_RS23965 at 936.278 kb on + strand, within ABIE40_RS23965 at 936.278 kb on + strand, within ABIE40_RS23965 at 936.279 kb on - strand, within ABIE40_RS23965 at 936.279 kb on - strand, within ABIE40_RS23965 at 936.303 kb on + strand, within ABIE40_RS23965 at 936.303 kb on + strand, within ABIE40_RS23965 at 936.304 kb on - strand, within ABIE40_RS23965 at 936.306 kb on + strand, within ABIE40_RS23965 at 936.306 kb on + strand, within ABIE40_RS23965 at 936.307 kb on - strand, within ABIE40_RS23965 at 936.307 kb on - strand, within ABIE40_RS23965 at 936.307 kb on - strand, within ABIE40_RS23965 at 936.307 kb on - strand, within ABIE40_RS23965 at 936.307 kb on - strand, within ABIE40_RS23965 at 936.363 kb on + strand, within ABIE40_RS23965 at 936.364 kb on - strand, within ABIE40_RS23965 at 936.531 kb on + strand at 936.531 kb on + strand at 936.755 kb on + strand, within ABIE40_RS23970 at 936.791 kb on + strand, within ABIE40_RS23970 at 936.791 kb on + strand, within ABIE40_RS23970 at 936.791 kb on + strand, within ABIE40_RS23970 at 936.792 kb on - strand, within ABIE40_RS23970 at 936.793 kb on + strand, within ABIE40_RS23970 at 936.842 kb on + strand, within ABIE40_RS23970 at 936.842 kb on + strand, within ABIE40_RS23970 at 936.842 kb on + strand, within ABIE40_RS23970 at 936.842 kb on + strand, within ABIE40_RS23970 at 936.842 kb on + strand, within ABIE40_RS23970 at 936.843 kb on - strand, within ABIE40_RS23970 at 936.843 kb on - strand, within ABIE40_RS23970 at 936.843 kb on - strand, within ABIE40_RS23970 at 936.843 kb on - strand, within ABIE40_RS23970 at 936.843 kb on - strand, within ABIE40_RS23970 at 936.845 kb on + strand, within ABIE40_RS23970 at 936.845 kb on + strand, within ABIE40_RS23970 at 936.845 kb on + strand, within ABIE40_RS23970 at 936.846 kb on - strand, within ABIE40_RS23970 at 936.846 kb on - strand, within ABIE40_RS23970 at 936.846 kb on - strand, within ABIE40_RS23970 at 936.846 kb on - strand, within ABIE40_RS23970 at 937.202 kb on + strand, within ABIE40_RS23970 at 937.202 kb on + strand, within ABIE40_RS23970 at 937.202 kb on + strand, within ABIE40_RS23970 at 937.202 kb on + strand, within ABIE40_RS23970 at 937.202 kb on + strand, within ABIE40_RS23970 at 937.202 kb on + strand, within ABIE40_RS23970 at 937.202 kb on + strand, within ABIE40_RS23970 at 937.203 kb on - strand, within ABIE40_RS23970 at 937.203 kb on - strand, within ABIE40_RS23970 at 937.203 kb on - strand, within ABIE40_RS23970 at 937.203 kb on - strand, within ABIE40_RS23970 at 937.203 kb on - strand, within ABIE40_RS23970 at 937.203 kb on - strand, within ABIE40_RS23970 at 937.659 kb on + strand, within ABIE40_RS23975 at 937.681 kb on + strand, within ABIE40_RS23975 at 937.681 kb on + strand, within ABIE40_RS23975 at 937.682 kb on - strand, within ABIE40_RS23975 at 938.065 kb on - strand at 938.181 kb on + strand, within ABIE40_RS23980 at 938.181 kb on + strand, within ABIE40_RS23980 at 938.211 kb on + strand, within ABIE40_RS23980 at 938.211 kb on + strand, within ABIE40_RS23980 at 938.211 kb on + strand, within ABIE40_RS23980 at 938.211 kb on + strand, within ABIE40_RS23980 at 938.212 kb on - strand, within ABIE40_RS23980 at 938.212 kb on - strand, within ABIE40_RS23980 at 938.212 kb on - strand, within ABIE40_RS23980
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 935,718 + -1.2 935,718 + +0.6 935,719 - -1.0 935,719 - -0.2 935,736 + +0.1 935,737 - -0.3 935,737 - -0.3 935,737 - +1.3 935,737 - +1.5 935,737 - -0.5 935,737 - -2.1 935,737 - -1.0 935,837 + ABIE40_RS23965 0.12 -0.3 936,063 + ABIE40_RS23965 0.41 +0.6 936,063 + ABIE40_RS23965 0.41 +3.1 936,064 - ABIE40_RS23965 0.41 +0.2 936,064 - ABIE40_RS23965 0.41 -0.4 936,064 - ABIE40_RS23965 0.41 -1.7 936,064 - ABIE40_RS23965 0.41 -0.9 936,064 - ABIE40_RS23965 0.41 +0.1 936,064 - ABIE40_RS23965 0.41 +0.4 936,064 - ABIE40_RS23965 0.41 +0.3 936,066 + ABIE40_RS23965 0.41 +0.5 936,066 + ABIE40_RS23965 0.41 -0.2 936,067 - ABIE40_RS23965 0.41 -0.2 936,067 - ABIE40_RS23965 0.41 -0.0 936,189 - ABIE40_RS23965 0.57 +0.3 936,198 + ABIE40_RS23965 0.58 -2.0 936,198 + ABIE40_RS23965 0.58 -0.0 936,198 + ABIE40_RS23965 0.58 +0.2 936,199 - ABIE40_RS23965 0.58 -1.2 936,276 + ABIE40_RS23965 0.68 +0.5 936,276 + ABIE40_RS23965 0.68 +1.3 936,276 + ABIE40_RS23965 0.68 +0.0 936,276 + ABIE40_RS23965 0.68 -0.6 936,277 - ABIE40_RS23965 0.68 -0.4 936,278 + ABIE40_RS23965 0.68 -0.4 936,278 + ABIE40_RS23965 0.68 -0.0 936,278 + ABIE40_RS23965 0.68 +0.9 936,278 + ABIE40_RS23965 0.68 +0.1 936,278 + ABIE40_RS23965 0.68 +1.5 936,279 - ABIE40_RS23965 0.68 -0.8 936,279 - ABIE40_RS23965 0.68 +1.1 936,303 + ABIE40_RS23965 0.71 +0.7 936,303 + ABIE40_RS23965 0.71 -0.0 936,304 - ABIE40_RS23965 0.71 -0.7 936,306 + ABIE40_RS23965 0.71 -0.9 936,306 + ABIE40_RS23965 0.71 +0.6 936,307 - ABIE40_RS23965 0.71 +0.1 936,307 - ABIE40_RS23965 0.71 -0.2 936,307 - ABIE40_RS23965 0.71 -0.3 936,307 - ABIE40_RS23965 0.71 -0.8 936,307 - ABIE40_RS23965 0.71 +0.5 936,363 + ABIE40_RS23965 0.78 -0.3 936,364 - ABIE40_RS23965 0.79 -0.1 936,531 + +0.0 936,531 + -0.3 936,755 + ABIE40_RS23970 0.22 -0.7 936,791 + ABIE40_RS23970 0.28 -1.0 936,791 + ABIE40_RS23970 0.28 -0.6 936,791 + ABIE40_RS23970 0.28 -1.4 936,792 - ABIE40_RS23970 0.28 +0.7 936,793 + ABIE40_RS23970 0.28 +0.1 936,842 + ABIE40_RS23970 0.35 -1.4 936,842 + ABIE40_RS23970 0.35 +0.9 936,842 + ABIE40_RS23970 0.35 -0.5 936,842 + ABIE40_RS23970 0.35 +1.6 936,842 + ABIE40_RS23970 0.35 -1.5 936,843 - ABIE40_RS23970 0.35 -0.3 936,843 - ABIE40_RS23970 0.35 -0.2 936,843 - ABIE40_RS23970 0.35 -0.3 936,843 - ABIE40_RS23970 0.35 -0.7 936,843 - ABIE40_RS23970 0.35 -0.7 936,845 + ABIE40_RS23970 0.36 +1.1 936,845 + ABIE40_RS23970 0.36 -0.2 936,845 + ABIE40_RS23970 0.36 +0.3 936,846 - ABIE40_RS23970 0.36 +0.6 936,846 - ABIE40_RS23970 0.36 -0.2 936,846 - ABIE40_RS23970 0.36 +0.2 936,846 - ABIE40_RS23970 0.36 +1.9 937,202 + ABIE40_RS23970 0.88 +1.6 937,202 + ABIE40_RS23970 0.88 -0.8 937,202 + ABIE40_RS23970 0.88 +0.3 937,202 + ABIE40_RS23970 0.88 -0.2 937,202 + ABIE40_RS23970 0.88 +0.0 937,202 + ABIE40_RS23970 0.88 -1.0 937,202 + ABIE40_RS23970 0.88 -0.0 937,203 - ABIE40_RS23970 0.89 -0.1 937,203 - ABIE40_RS23970 0.89 -0.0 937,203 - ABIE40_RS23970 0.89 -0.3 937,203 - ABIE40_RS23970 0.89 +0.7 937,203 - ABIE40_RS23970 0.89 +0.0 937,203 - ABIE40_RS23970 0.89 -0.7 937,659 + ABIE40_RS23975 0.52 +0.2 937,681 + ABIE40_RS23975 0.55 -0.3 937,681 + ABIE40_RS23975 0.55 -0.1 937,682 - ABIE40_RS23975 0.55 -0.2 938,065 - -0.7 938,181 + ABIE40_RS23980 0.11 +1.3 938,181 + ABIE40_RS23980 0.11 -0.0 938,211 + ABIE40_RS23980 0.13 +1.0 938,211 + ABIE40_RS23980 0.13 -0.4 938,211 + ABIE40_RS23980 0.13 +0.6 938,211 + ABIE40_RS23980 0.13 -2.3 938,212 - ABIE40_RS23980 0.13 -0.8 938,212 - ABIE40_RS23980 0.13 -0.5 938,212 - ABIE40_RS23980 0.13 +0.5
Or see this region's nucleotide sequence