Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS22395 and ABIE40_RS22400 are separated by 55 nucleotides ABIE40_RS22400 and ABIE40_RS22405 are separated by 51 nucleotides ABIE40_RS22405 and ABIE40_RS22410 are separated by 211 nucleotides
ABIE40_RS22395: ABIE40_RS22395 - cytochrome c, at 610,412 to 611,326
_RS22395
ABIE40_RS22400: ABIE40_RS22400 - mannonate dehydratase, at 611,382 to 612,569
_RS22400
ABIE40_RS22405: ABIE40_RS22405 - GntR family transcriptional regulator, at 612,621 to 613,343
_RS22405
ABIE40_RS22410: ABIE40_RS22410 - extracellular solute-binding protein, at 613,555 to 614,730
_RS22410
Position (kb) 611
612
613 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 610.481 kb on + strand at 610.481 kb on + strand at 610.481 kb on + strand at 610.481 kb on + strand at 610.482 kb on - strand at 610.482 kb on - strand at 610.684 kb on + strand, within ABIE40_RS22395 at 610.684 kb on + strand, within ABIE40_RS22395 at 610.685 kb on - strand, within ABIE40_RS22395 at 610.685 kb on - strand, within ABIE40_RS22395 at 610.796 kb on + strand, within ABIE40_RS22395 at 610.805 kb on + strand, within ABIE40_RS22395 at 610.806 kb on - strand, within ABIE40_RS22395 at 610.907 kb on + strand, within ABIE40_RS22395 at 610.907 kb on + strand, within ABIE40_RS22395 at 610.907 kb on + strand, within ABIE40_RS22395 at 610.908 kb on - strand, within ABIE40_RS22395 at 610.908 kb on - strand, within ABIE40_RS22395 at 610.908 kb on - strand, within ABIE40_RS22395 at 610.908 kb on - strand, within ABIE40_RS22395 at 610.908 kb on - strand, within ABIE40_RS22395 at 610.908 kb on - strand, within ABIE40_RS22395 at 610.908 kb on - strand, within ABIE40_RS22395 at 610.908 kb on - strand, within ABIE40_RS22395 at 610.909 kb on + strand, within ABIE40_RS22395 at 610.909 kb on + strand, within ABIE40_RS22395 at 610.909 kb on + strand, within ABIE40_RS22395 at 610.910 kb on - strand, within ABIE40_RS22395 at 610.910 kb on - strand, within ABIE40_RS22395 at 610.910 kb on - strand, within ABIE40_RS22395 at 610.910 kb on - strand, within ABIE40_RS22395 at 610.914 kb on + strand, within ABIE40_RS22395 at 611.009 kb on + strand, within ABIE40_RS22395 at 611.010 kb on - strand, within ABIE40_RS22395 at 611.189 kb on + strand, within ABIE40_RS22395 at 611.190 kb on - strand, within ABIE40_RS22395 at 611.301 kb on - strand at 611.301 kb on - strand at 611.304 kb on + strand at 611.304 kb on + strand at 611.304 kb on + strand at 611.304 kb on + strand at 611.304 kb on + strand at 611.305 kb on - strand at 611.305 kb on - strand at 611.335 kb on + strand at 611.336 kb on - strand at 611.338 kb on + strand at 611.338 kb on + strand at 611.345 kb on + strand at 611.345 kb on + strand at 611.383 kb on + strand at 611.407 kb on + strand at 611.408 kb on - strand at 611.408 kb on - strand at 611.420 kb on + strand at 611.421 kb on - strand at 611.546 kb on + strand, within ABIE40_RS22400 at 611.546 kb on + strand, within ABIE40_RS22400 at 611.546 kb on + strand, within ABIE40_RS22400 at 611.546 kb on + strand, within ABIE40_RS22400 at 611.547 kb on - strand, within ABIE40_RS22400 at 611.547 kb on - strand, within ABIE40_RS22400 at 611.547 kb on - strand, within ABIE40_RS22400 at 611.668 kb on + strand, within ABIE40_RS22400 at 611.668 kb on + strand, within ABIE40_RS22400 at 611.668 kb on + strand, within ABIE40_RS22400 at 611.668 kb on + strand, within ABIE40_RS22400 at 611.743 kb on + strand, within ABIE40_RS22400 at 611.743 kb on + strand, within ABIE40_RS22400 at 611.743 kb on + strand, within ABIE40_RS22400 at 611.744 kb on - strand, within ABIE40_RS22400 at 611.744 kb on - strand, within ABIE40_RS22400 at 611.792 kb on - strand, within ABIE40_RS22400 at 611.953 kb on + strand, within ABIE40_RS22400 at 612.106 kb on + strand, within ABIE40_RS22400 at 612.206 kb on - strand, within ABIE40_RS22400 at 612.206 kb on - strand, within ABIE40_RS22400 at 612.206 kb on - strand, within ABIE40_RS22400 at 612.250 kb on + strand, within ABIE40_RS22400 at 612.749 kb on + strand, within ABIE40_RS22405 at 612.749 kb on + strand, within ABIE40_RS22405 at 612.826 kb on - strand, within ABIE40_RS22405 at 612.826 kb on - strand, within ABIE40_RS22405 at 612.974 kb on + strand, within ABIE40_RS22405 at 613.103 kb on + strand, within ABIE40_RS22405 at 613.104 kb on - strand, within ABIE40_RS22405 at 613.237 kb on + strand, within ABIE40_RS22405 at 613.237 kb on + strand, within ABIE40_RS22405 at 613.347 kb on - strand at 613.347 kb on - strand at 613.347 kb on - strand at 613.376 kb on - strand at 613.378 kb on + strand at 613.383 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 610,481 + +0.2 610,481 + +2.5 610,481 + -0.5 610,481 + -0.3 610,482 - -0.8 610,482 - +0.4 610,684 + ABIE40_RS22395 0.30 -0.2 610,684 + ABIE40_RS22395 0.30 +0.3 610,685 - ABIE40_RS22395 0.30 +0.4 610,685 - ABIE40_RS22395 0.30 -0.3 610,796 + ABIE40_RS22395 0.42 -0.5 610,805 + ABIE40_RS22395 0.43 +0.7 610,806 - ABIE40_RS22395 0.43 -2.6 610,907 + ABIE40_RS22395 0.54 -0.4 610,907 + ABIE40_RS22395 0.54 -2.3 610,907 + ABIE40_RS22395 0.54 -0.1 610,908 - ABIE40_RS22395 0.54 +1.2 610,908 - ABIE40_RS22395 0.54 +0.9 610,908 - ABIE40_RS22395 0.54 +0.0 610,908 - ABIE40_RS22395 0.54 +0.6 610,908 - ABIE40_RS22395 0.54 +0.0 610,908 - ABIE40_RS22395 0.54 +0.6 610,908 - ABIE40_RS22395 0.54 +1.0 610,908 - ABIE40_RS22395 0.54 +0.2 610,909 + ABIE40_RS22395 0.54 -0.5 610,909 + ABIE40_RS22395 0.54 -1.1 610,909 + ABIE40_RS22395 0.54 +0.3 610,910 - ABIE40_RS22395 0.54 +0.2 610,910 - ABIE40_RS22395 0.54 +0.8 610,910 - ABIE40_RS22395 0.54 -0.7 610,910 - ABIE40_RS22395 0.54 -1.1 610,914 + ABIE40_RS22395 0.55 -2.2 611,009 + ABIE40_RS22395 0.65 -1.8 611,010 - ABIE40_RS22395 0.65 +0.3 611,189 + ABIE40_RS22395 0.85 +0.7 611,190 - ABIE40_RS22395 0.85 +1.7 611,301 - -1.1 611,301 - +0.1 611,304 + -0.2 611,304 + +0.1 611,304 + -0.5 611,304 + +0.7 611,304 + +1.2 611,305 - -0.6 611,305 - -0.1 611,335 + +1.7 611,336 - -0.1 611,338 + -0.3 611,338 + +0.5 611,345 + -0.8 611,345 + -0.2 611,383 + +0.7 611,407 + +0.0 611,408 - +0.9 611,408 - +1.8 611,420 + +0.2 611,421 - +0.2 611,546 + ABIE40_RS22400 0.14 +1.2 611,546 + ABIE40_RS22400 0.14 -0.5 611,546 + ABIE40_RS22400 0.14 -0.9 611,546 + ABIE40_RS22400 0.14 -2.5 611,547 - ABIE40_RS22400 0.14 -0.4 611,547 - ABIE40_RS22400 0.14 +0.0 611,547 - ABIE40_RS22400 0.14 +0.5 611,668 + ABIE40_RS22400 0.24 -0.2 611,668 + ABIE40_RS22400 0.24 -0.8 611,668 + ABIE40_RS22400 0.24 -0.5 611,668 + ABIE40_RS22400 0.24 +0.0 611,743 + ABIE40_RS22400 0.30 +0.0 611,743 + ABIE40_RS22400 0.30 -1.2 611,743 + ABIE40_RS22400 0.30 +0.3 611,744 - ABIE40_RS22400 0.30 +0.9 611,744 - ABIE40_RS22400 0.30 -0.6 611,792 - ABIE40_RS22400 0.35 -0.1 611,953 + ABIE40_RS22400 0.48 -0.2 612,106 + ABIE40_RS22400 0.61 +0.5 612,206 - ABIE40_RS22400 0.69 -0.1 612,206 - ABIE40_RS22400 0.69 +0.1 612,206 - ABIE40_RS22400 0.69 -0.7 612,250 + ABIE40_RS22400 0.73 -1.1 612,749 + ABIE40_RS22405 0.18 +4.0 612,749 + ABIE40_RS22405 0.18 +1.9 612,826 - ABIE40_RS22405 0.28 +3.6 612,826 - ABIE40_RS22405 0.28 +3.6 612,974 + ABIE40_RS22405 0.49 +1.5 613,103 + ABIE40_RS22405 0.67 +3.1 613,104 - ABIE40_RS22405 0.67 +2.4 613,237 + ABIE40_RS22405 0.85 +3.0 613,237 + ABIE40_RS22405 0.85 +3.3 613,347 - +2.4 613,347 - +2.4 613,347 - +1.9 613,376 - -2.1 613,378 + -2.5 613,383 + -3.2
Or see this region's nucleotide sequence