Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS19130

Experiment: D-Glucose-6-Phosphate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose-6-Phosphate (C)
3,836,622	+		ABIE40_RS19125	0.50	+0.3
3,836,622	+		ABIE40_RS19125	0.50	-0.2
3,836,623	-		ABIE40_RS19125	0.50	+0.6
3,836,729	+		ABIE40_RS19125	0.58	+0.2
3,836,729	+		ABIE40_RS19125	0.58	+0.1
3,836,729	+		ABIE40_RS19125	0.58	-0.7
3,836,730	-		ABIE40_RS19125	0.58	-0.5
3,836,730	-		ABIE40_RS19125	0.58	-0.3
3,836,730	-		ABIE40_RS19125	0.58	+0.2
3,836,730	-		ABIE40_RS19125	0.58	+0.3
3,836,730	-		ABIE40_RS19125	0.58	+1.3
3,836,730	-		ABIE40_RS19125	0.58	-0.5
3,836,816	+		ABIE40_RS19125	0.64	+0.1
3,836,817	-		ABIE40_RS19125	0.64	-0.6
3,836,817	-		ABIE40_RS19125	0.64	-0.2
3,836,817	-		ABIE40_RS19125	0.64	+0.7
3,836,963	+		ABIE40_RS19125	0.74	-0.8
3,836,964	-		ABIE40_RS19125	0.74	-1.9
3,836,965	+		ABIE40_RS19125	0.74	-0.7
3,836,966	+		ABIE40_RS19125	0.75	+0.2
3,836,966	-		ABIE40_RS19125	0.75	+0.1
3,836,966	-		ABIE40_RS19125	0.75	-1.0
3,836,966	-		ABIE40_RS19125	0.75	+1.1
3,836,966	-		ABIE40_RS19125	0.75	+0.4
3,836,966	-		ABIE40_RS19125	0.75	-0.2
3,836,966	-		ABIE40_RS19125	0.75	+0.2
3,837,038	+		ABIE40_RS19125	0.80	-0.3
3,837,038	+		ABIE40_RS19125	0.80	-1.0
3,837,038	+		ABIE40_RS19125	0.80	-1.0
3,837,038	+		ABIE40_RS19125	0.80	-0.5
3,837,038	+		ABIE40_RS19125	0.80	-0.7
3,837,038	+		ABIE40_RS19125	0.80	-0.6
3,837,039	-		ABIE40_RS19125	0.80	-1.4
3,837,039	-		ABIE40_RS19125	0.80	+1.6
3,837,039	-		ABIE40_RS19125	0.80	+1.1
3,837,047	+		ABIE40_RS19125	0.80	+0.0
3,837,102	-		ABIE40_RS19125	0.84	-0.5
3,837,102	-		ABIE40_RS19125	0.84	+0.9
3,837,141	-		ABIE40_RS19125	0.87	+0.0
3,837,152	+		ABIE40_RS19125	0.88	+0.1
3,837,152	+		ABIE40_RS19125	0.88	+1.0
3,837,152	+		ABIE40_RS19125	0.88	+2.6
3,837,152	+		ABIE40_RS19125	0.88	-0.7
3,837,152	+		ABIE40_RS19125	0.88	-0.1
3,837,152	+		ABIE40_RS19125	0.88	-0.1
3,837,152	+		ABIE40_RS19125	0.88	+0.0
3,837,152	+		ABIE40_RS19125	0.88	-1.2
3,837,152	+		ABIE40_RS19125	0.88	+0.2
3,837,153	-		ABIE40_RS19125	0.88	-0.6
3,837,153	-		ABIE40_RS19125	0.88	-2.0
3,837,153	-		ABIE40_RS19125	0.88	-1.8
3,837,153	-		ABIE40_RS19125	0.88	+0.1
3,837,153	-		ABIE40_RS19125	0.88	-0.9
3,837,153	-		ABIE40_RS19125	0.88	+0.1
3,837,153	-		ABIE40_RS19125	0.88	+0.0
3,837,208	+				-0.2
3,837,208	+				-2.3
3,837,209	-				+0.1
3,837,212	+				-0.2
3,837,212	+				+0.3
3,837,213	-				-2.2
3,837,213	-				+0.6
3,837,487	+				-1.7
3,837,669	+		ABIE40_RS19130	0.19	-3.3
3,837,842	-		ABIE40_RS19130	0.30	-1.6
3,838,059	+		ABIE40_RS19130	0.43	-2.3
3,838,060	-		ABIE40_RS19130	0.43	-1.7
3,838,164	+		ABIE40_RS19130	0.50	-2.0
3,838,165	-		ABIE40_RS19130	0.50	-2.8
3,838,186	+		ABIE40_RS19130	0.51	-3.0
3,838,187	-		ABIE40_RS19130	0.51	-2.3
3,838,193	-		ABIE40_RS19130	0.52	-1.7
3,838,194	+		ABIE40_RS19130	0.52	-1.1
3,838,195	-		ABIE40_RS19130	0.52	-1.1
3,838,261	-		ABIE40_RS19130	0.56	-1.4
3,838,261	-		ABIE40_RS19130	0.56	-1.4
3,838,293	+		ABIE40_RS19130	0.58	-1.7
3,838,390	-		ABIE40_RS19130	0.64	-0.6
3,838,390	-		ABIE40_RS19130	0.64	-0.8
3,838,440	+		ABIE40_RS19130	0.67	-1.3
3,838,518	+		ABIE40_RS19130	0.72	-1.7
3,838,519	-		ABIE40_RS19130	0.72	-1.3
3,838,519	-		ABIE40_RS19130	0.72	-2.0
3,838,570	+		ABIE40_RS19130	0.75	+0.2
3,839,020	+				-2.1
3,839,021	-				-0.1
3,839,021	-				-1.4
3,839,021	-				-0.1
3,839,021	-				+0.3
3,839,021	-				-0.1
3,839,023	-				-0.9
3,839,023	-				+0.5
3,839,028	+				-3.0
3,839,028	+				-1.7
3,839,029	-				+0.0
3,839,029	-				+0.8
3,839,029	-				+0.7
3,839,064	-				+0.4
3,839,064	-				+0.1
3,839,074	+				-0.8
3,839,378	+		ABIE40_RS19135	0.18	+0.5
3,839,378	+		ABIE40_RS19135	0.18	+0.7
3,839,379	-		ABIE40_RS19135	0.18	+2.1
3,839,437	+		ABIE40_RS19135	0.22	-0.4
3,839,438	-		ABIE40_RS19135	0.22	+0.6
3,839,494	-		ABIE40_RS19135	0.25	+1.3
3,839,494	-		ABIE40_RS19135	0.25	-0.7
3,839,494	-		ABIE40_RS19135	0.25	+0.9
3,839,505	-		ABIE40_RS19135	0.26	+2.0
3,839,505	-		ABIE40_RS19135	0.26	-0.9
3,839,513	+		ABIE40_RS19135	0.26	+0.5
3,839,514	-		ABIE40_RS19135	0.26	+1.7
3,839,567	+		ABIE40_RS19135	0.30	-1.1
3,839,567	+		ABIE40_RS19135	0.30	+1.6
3,839,568	-		ABIE40_RS19135	0.30	-0.2
3,839,568	-		ABIE40_RS19135	0.30	-0.5
3,839,568	-		ABIE40_RS19135	0.30	-1.3
3,839,568	-		ABIE40_RS19135	0.30	+0.8
3,839,620	+		ABIE40_RS19135	0.33	+0.2
3,839,620	+		ABIE40_RS19135	0.33	+0.1
3,839,621	-		ABIE40_RS19135	0.33	-1.4
3,839,621	-		ABIE40_RS19135	0.33	+2.1
3,839,621	-		ABIE40_RS19135	0.33	+0.7
3,839,621	-		ABIE40_RS19135	0.33	+0.1
3,839,621	-		ABIE40_RS19135	0.33	-1.8
3,839,621	-		ABIE40_RS19135	0.33	-0.4
3,839,742	-		ABIE40_RS19135	0.40	-0.5
3,839,935	+		ABIE40_RS19135	0.51	+0.4
3,839,935	+		ABIE40_RS19135	0.51	-0.6
3,839,936	-		ABIE40_RS19135	0.52	-0.6
3,839,936	-		ABIE40_RS19135	0.52	+1.2
3,839,936	-		ABIE40_RS19135	0.52	+0.5