Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS12360

Experiment: D-Glucose-6-Phosphate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose-6-Phosphate (C)
2,414,940	+		ABIE40_RS12355	0.71	-0.3
2,414,980	+		ABIE40_RS12355	0.73	+0.3
2,414,981	-		ABIE40_RS12355	0.73	+0.6
2,414,981	-		ABIE40_RS12355	0.73	+0.3
2,414,981	-		ABIE40_RS12355	0.73	+0.4
2,414,981	-		ABIE40_RS12355	0.73	+0.4
2,414,981	-		ABIE40_RS12355	0.73	+0.1
2,414,999	+		ABIE40_RS12355	0.74	+0.6
2,414,999	+		ABIE40_RS12355	0.74	-0.1
2,414,999	+		ABIE40_RS12355	0.74	+1.6
2,414,999	+		ABIE40_RS12355	0.74	-0.1
2,415,000	-		ABIE40_RS12355	0.74	+0.9
2,415,000	-		ABIE40_RS12355	0.74	+0.8
2,415,000	-		ABIE40_RS12355	0.74	+1.6
2,415,000	-		ABIE40_RS12355	0.74	+1.0
2,415,000	-		ABIE40_RS12355	0.74	-0.1
2,415,087	-		ABIE40_RS12355	0.78	-0.6
2,415,106	-		ABIE40_RS12355	0.79	-1.1
2,415,183	-		ABIE40_RS12355	0.82	+1.5
2,415,318	+		ABIE40_RS12355	0.89	-0.4
2,415,318	+		ABIE40_RS12355	0.89	+1.0
2,415,319	-		ABIE40_RS12355	0.89	-0.9
2,415,382	-				+0.4
2,415,382	-				-0.7
2,415,382	-				-0.2
2,415,443	+				-0.8
2,415,444	-				+0.5
2,415,466	+				-0.3
2,415,466	+				+0.1
2,415,466	+				+0.9
2,415,533	+				-0.6
2,415,534	-				-0.8
2,415,542	+				-1.7
2,415,542	+				-0.4
2,415,542	+				-0.8
2,415,543	-				-0.8
2,415,543	-				+3.6
2,415,547	-				-2.1
2,415,547	-				+0.4
2,415,550	+				-0.9
2,415,550	+				+1.0
2,415,550	+				-1.7
2,415,550	+				-1.1
2,415,550	+				+0.1
2,415,551	-				-1.4
2,415,551	-				-0.2
2,415,551	-				-1.0
2,415,598	+				-1.3
2,415,599	-				+0.0
2,415,698	+				-0.2
2,415,699	-				-0.5
2,415,743	+				+0.0
2,415,743	+				-0.0
2,415,743	+				+0.2
2,415,744	-				-0.1
2,415,744	-				+0.6
2,415,772	-				+0.1
2,415,792	+				+0.6
2,415,858	+				-0.3
2,415,859	-				-1.0
2,415,859	-				-0.2
2,415,859	-				-0.3
2,415,859	-				+0.2
2,415,859	-				+0.9
2,415,859	-				-0.1
2,415,859	-				+0.4
2,415,859	-				-0.2
2,415,923	+				-0.7
2,415,923	+				-1.2
2,415,923	+				-1.9
2,415,958	+				-2.7
2,415,971	+				-1.0
2,415,971	+				-2.9
2,415,971	+				-2.9
2,415,971	+				-1.3
2,415,972	-				-3.8
2,415,999	+		ABIE40_RS12360	0.12	-2.8
2,415,999	+		ABIE40_RS12360	0.12	+1.6
2,416,000	-		ABIE40_RS12360	0.12	-2.2
2,416,000	-		ABIE40_RS12360	0.12	-1.7
2,416,047	+		ABIE40_RS12360	0.18	-1.0
2,416,047	+		ABIE40_RS12360	0.18	-0.4
2,416,048	-		ABIE40_RS12360	0.18	-0.7
2,416,163	+		ABIE40_RS12360	0.33	-3.0
2,416,169	+		ABIE40_RS12360	0.34	-1.0
2,416,169	+		ABIE40_RS12360	0.34	-1.9
2,416,169	+		ABIE40_RS12360	0.34	-1.6
2,416,169	+		ABIE40_RS12360	0.34	-2.6
2,416,254	+		ABIE40_RS12360	0.46	-2.0
2,416,254	+		ABIE40_RS12360	0.46	-2.0
2,416,254	+		ABIE40_RS12360	0.46	-1.9
2,416,254	+		ABIE40_RS12360	0.46	-2.8
2,416,255	-		ABIE40_RS12360	0.46	-1.4
2,416,255	-		ABIE40_RS12360	0.46	-0.8
2,416,261	+		ABIE40_RS12360	0.47	-2.2
2,416,261	+		ABIE40_RS12360	0.47	-1.1
2,416,261	+		ABIE40_RS12360	0.47	-2.3
2,416,262	-		ABIE40_RS12360	0.47	-3.2
2,416,262	-		ABIE40_RS12360	0.47	-1.8
2,416,262	-		ABIE40_RS12360	0.47	-3.1
2,416,262	-		ABIE40_RS12360	0.47	-1.2
2,416,262	-		ABIE40_RS12360	0.47	-1.9
2,416,265	+		ABIE40_RS12360	0.47	-1.9
2,416,265	+		ABIE40_RS12360	0.47	-1.0
2,416,265	+		ABIE40_RS12360	0.47	-0.6
2,416,265	+		ABIE40_RS12360	0.47	+0.3
2,416,265	+		ABIE40_RS12360	0.47	-3.3
2,416,266	-		ABIE40_RS12360	0.47	-2.0
2,416,319	-		ABIE40_RS12360	0.54	-3.5
2,416,319	-		ABIE40_RS12360	0.54	-2.1
2,416,361	-		ABIE40_RS12360	0.60	-3.5
2,416,449	-		ABIE40_RS12360	0.72	-1.9
2,416,543	+		ABIE40_RS12360	0.84	-2.5
2,416,543	+		ABIE40_RS12360	0.84	-0.4
2,416,544	-		ABIE40_RS12360	0.84	-2.6
2,416,544	-		ABIE40_RS12360	0.84	-1.4
2,416,544	-		ABIE40_RS12360	0.84	-0.6
2,416,544	-		ABIE40_RS12360	0.84	-0.9
2,416,544	-		ABIE40_RS12360	0.84	-3.4
2,416,544	-		ABIE40_RS12360	0.84	-2.6
2,416,547	+		ABIE40_RS12360	0.85	-3.1
2,416,617	+				-1.4
2,416,617	+				-3.1
2,416,618	-				-1.9
2,416,618	-				-3.1
2,416,628	+				+0.8
2,416,629	-				-0.5
2,416,656	-				-0.6
2,416,804	+		ABIE40_RS12365	0.21	-0.8
2,416,805	-		ABIE40_RS12365	0.21	+1.3
2,416,805	-		ABIE40_RS12365	0.21	+1.6
2,416,810	-		ABIE40_RS12365	0.21	-0.4
2,416,902	+		ABIE40_RS12365	0.31	-1.6
2,416,902	+		ABIE40_RS12365	0.31	-1.6
2,416,903	-		ABIE40_RS12365	0.31	+0.0
2,416,903	-		ABIE40_RS12365	0.31	-0.6
2,416,903	-		ABIE40_RS12365	0.31	+0.0
2,416,936	+		ABIE40_RS12365	0.35	-1.0
2,416,936	+		ABIE40_RS12365	0.35	+0.7
2,416,936	+		ABIE40_RS12365	0.35	+4.2
2,416,936	+		ABIE40_RS12365	0.35	-0.5
2,416,936	+		ABIE40_RS12365	0.35	-1.8
2,416,936	+		ABIE40_RS12365	0.35	-4.3
2,416,937	-		ABIE40_RS12365	0.35	-0.3
2,416,937	-		ABIE40_RS12365	0.35	+0.1
2,416,937	-		ABIE40_RS12365	0.35	-0.1
2,416,976	+		ABIE40_RS12365	0.39	+0.5
2,416,976	+		ABIE40_RS12365	0.39	-0.1
2,416,976	+		ABIE40_RS12365	0.39	+0.3
2,416,976	+		ABIE40_RS12365	0.39	-0.3
2,416,977	-		ABIE40_RS12365	0.39	-0.1
2,416,977	-		ABIE40_RS12365	0.39	+0.6
2,416,977	-		ABIE40_RS12365	0.39	+0.3
2,416,978	+		ABIE40_RS12365	0.40	+0.2
2,416,979	-		ABIE40_RS12365	0.40	-0.0
2,416,979	-		ABIE40_RS12365	0.40	+1.1
2,416,979	-		ABIE40_RS12365	0.40	-1.9
2,416,999	-		ABIE40_RS12365	0.42	-1.4
2,417,129	+		ABIE40_RS12365	0.56	-0.7
2,417,129	+		ABIE40_RS12365	0.56	+1.4
2,417,140	+		ABIE40_RS12365	0.57	+2.0
2,417,140	+		ABIE40_RS12365	0.57	+0.1
2,417,141	-		ABIE40_RS12365	0.57	+0.8
2,417,141	-		ABIE40_RS12365	0.57	-0.3
2,417,141	-		ABIE40_RS12365	0.57	+0.1
2,417,141	-		ABIE40_RS12365	0.57	-1.4
2,417,141	-		ABIE40_RS12365	0.57	+0.3
2,417,153	-		ABIE40_RS12365	0.59	+0.1
2,417,153	-		ABIE40_RS12365	0.59	+0.6
2,417,255	+		ABIE40_RS12365	0.70	+0.0
2,417,255	+		ABIE40_RS12365	0.70	+0.0
2,417,273	-		ABIE40_RS12365	0.72	+0.0
2,417,273	-		ABIE40_RS12365	0.72	+2.0
2,417,371	+		ABIE40_RS12365	0.83	-1.0
2,417,407	+		ABIE40_RS12365	0.86	+0.1
2,417,407	+		ABIE40_RS12365	0.86	+0.6
2,417,408	-		ABIE40_RS12365	0.87	+1.2
2,417,409	+		ABIE40_RS12365	0.87	-0.6
2,417,409	+		ABIE40_RS12365	0.87	-1.1
2,417,409	+		ABIE40_RS12365	0.87	-0.4
2,417,409	+		ABIE40_RS12365	0.87	-1.2
2,417,409	+		ABIE40_RS12365	0.87	+0.3
2,417,410	-		ABIE40_RS12365	0.87	-0.5
2,417,410	-		ABIE40_RS12365	0.87	-0.4
2,417,448	+				-0.8
2,417,461	-				-0.6
2,417,483	+				-0.2
2,417,484	-				-0.4
2,417,484	-				+0.1
2,417,484	-				-0.2
2,417,492	-				+0.3
2,417,564	+				-0.6
2,417,565	-				+0.3
2,417,567	+				+0.5
2,417,567	+				+0.3
2,417,569	+				+1.0
2,417,569	+				-0.0
2,417,569	+				+0.6
2,417,573	-				+0.5
2,417,658	+				+0.4
2,417,658	+				-1.2
2,417,659	-				-1.7