Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS08140

Experiment: D-Glucose-6-Phosphate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose-6-Phosphate (C)
1,566,260	-				+1.0
1,566,376	-		ABIE40_RS08135	0.21	-2.5
1,566,409	-		ABIE40_RS08135	0.25	+0.3
1,566,476	+		ABIE40_RS08135	0.32	+0.1
1,566,487	+		ABIE40_RS08135	0.33	+0.8
1,566,622	+		ABIE40_RS08135	0.46	+0.4
1,566,622	+		ABIE40_RS08135	0.46	+0.1
1,566,622	+		ABIE40_RS08135	0.46	+0.4
1,566,623	-		ABIE40_RS08135	0.46	+0.2
1,566,634	+		ABIE40_RS08135	0.47	+0.7
1,566,634	+		ABIE40_RS08135	0.47	+0.7
1,566,635	-		ABIE40_RS08135	0.48	+0.8
1,566,635	-		ABIE40_RS08135	0.48	-0.1
1,566,635	-		ABIE40_RS08135	0.48	-0.1
1,566,664	+		ABIE40_RS08135	0.50	+0.6
1,566,665	-		ABIE40_RS08135	0.51	-0.8
1,566,796	+		ABIE40_RS08135	0.64	-1.2
1,566,903	-		ABIE40_RS08135	0.75	-1.0
1,566,947	+		ABIE40_RS08135	0.79	-0.0
1,566,947	+		ABIE40_RS08135	0.79	-0.7
1,566,947	+		ABIE40_RS08135	0.79	+1.7
1,566,947	+		ABIE40_RS08135	0.79	+1.0
1,566,947	+		ABIE40_RS08135	0.79	-0.0
1,566,947	+		ABIE40_RS08135	0.79	+0.8
1,566,948	-		ABIE40_RS08135	0.79	-0.0
1,566,948	-		ABIE40_RS08135	0.79	-0.3
1,566,948	-		ABIE40_RS08135	0.79	+1.6
1,566,948	-		ABIE40_RS08135	0.79	-1.6
1,566,948	-		ABIE40_RS08135	0.79	-0.0
1,566,962	-		ABIE40_RS08135	0.80	-0.7
1,566,968	-		ABIE40_RS08135	0.81	+1.7
1,566,968	-		ABIE40_RS08135	0.81	+1.2
1,566,971	+		ABIE40_RS08135	0.81	-0.3
1,566,971	+		ABIE40_RS08135	0.81	-0.3
1,567,001	-		ABIE40_RS08135	0.84	+0.5
1,567,125	+				+2.6
1,567,126	-				+0.8
1,567,139	+				+0.5
1,567,139	+				+1.0
1,567,140	-				+0.9
1,567,140	-				+0.3
1,567,140	-				-1.8
1,567,141	+				-0.3
1,567,142	-				-0.4
1,567,142	-				-0.1
1,567,146	+				+0.9
1,567,146	+				+1.8
1,567,146	+				-0.8
1,567,146	+				-2.0
1,567,147	-				-0.2
1,567,147	-				+0.1
1,567,147	-				-0.5
1,567,147	-				+1.3
1,567,147	-				+0.3
1,567,161	-				-0.8
1,567,204	+				-2.1
1,567,204	+				+0.7
1,567,205	-				+3.3
1,567,227	+				+1.4
1,567,227	+				-0.4
1,567,227	+				-1.2
1,567,228	-				-0.3
1,567,228	-				+0.9
1,567,342	+				-1.6
1,567,342	+				-2.6
1,567,342	+				-1.4
1,567,343	-				-2.6
1,567,343	-				-1.0
1,567,343	-				-3.4
1,567,343	-				-3.7
1,567,343	-				-0.3
1,567,343	-				-2.2
1,567,354	-				-1.2
1,567,354	-				-1.6
1,567,725	+		ABIE40_RS08140	0.12	-1.4
1,567,810	+		ABIE40_RS08140	0.15	-1.7
1,567,811	-		ABIE40_RS08140	0.15	-1.3
1,567,811	-		ABIE40_RS08140	0.15	-3.8
1,567,842	+		ABIE40_RS08140	0.15	-2.6
1,567,870	-		ABIE40_RS08140	0.16	+0.4
1,567,870	-		ABIE40_RS08140	0.16	-1.0
1,567,870	-		ABIE40_RS08140	0.16	-1.0
1,567,959	+		ABIE40_RS08140	0.18	-1.5
1,567,959	+		ABIE40_RS08140	0.18	-1.0
1,567,960	-		ABIE40_RS08140	0.18	-2.0
1,567,960	-		ABIE40_RS08140	0.18	-0.0
1,567,960	-		ABIE40_RS08140	0.18	-2.8
1,567,980	+		ABIE40_RS08140	0.19	-2.4
1,568,107	-		ABIE40_RS08140	0.22	-0.1
1,568,113	+		ABIE40_RS08140	0.22	-1.2
1,568,113	+		ABIE40_RS08140	0.22	-2.2
1,568,114	-		ABIE40_RS08140	0.23	-1.3
1,568,114	-		ABIE40_RS08140	0.23	-2.2
1,568,114	-		ABIE40_RS08140	0.23	-1.9
1,568,114	-		ABIE40_RS08140	0.23	-0.6
1,568,142	+		ABIE40_RS08140	0.23	-3.4
1,568,143	-		ABIE40_RS08140	0.23	-1.3
1,568,143	-		ABIE40_RS08140	0.23	-1.7
1,568,337	+		ABIE40_RS08140	0.28	-2.7
1,568,337	+		ABIE40_RS08140	0.28	-3.3
1,568,338	-		ABIE40_RS08140	0.28	-2.7
1,568,380	-		ABIE40_RS08140	0.29	-1.0
1,568,380	-		ABIE40_RS08140	0.29	-3.5
1,568,380	-		ABIE40_RS08140	0.29	-1.7
1,568,380	-		ABIE40_RS08140	0.29	-3.1
1,568,380	-		ABIE40_RS08140	0.29	-2.6
1,568,500	-		ABIE40_RS08140	0.33	-0.7
1,568,748	-		ABIE40_RS08140	0.39	-1.9
1,568,748	-		ABIE40_RS08140	0.39	-1.4
1,568,872	-		ABIE40_RS08140	0.42	-0.8
1,568,872	-		ABIE40_RS08140	0.42	-3.8
1,569,202	-		ABIE40_RS08140	0.51	-2.5
1,569,324	+		ABIE40_RS08140	0.54	-0.0
1,569,388	-		ABIE40_RS08140	0.56	-1.6
1,569,429	+		ABIE40_RS08140	0.57	-1.2
1,569,445	+		ABIE40_RS08140	0.57	-3.4
1,569,451	-		ABIE40_RS08140	0.57	-4.0
1,569,639	+		ABIE40_RS08140	0.62	-2.7
1,569,639	+		ABIE40_RS08140	0.62	-3.0
1,569,640	-		ABIE40_RS08140	0.62	-1.5
1,569,640	-		ABIE40_RS08140	0.62	-1.8
1,569,640	-		ABIE40_RS08140	0.62	-2.2
1,569,750	+		ABIE40_RS08140	0.65	-1.7
1,569,751	-		ABIE40_RS08140	0.65	-2.5
1,569,910	-		ABIE40_RS08140	0.69	-0.0
1,569,910	-		ABIE40_RS08140	0.69	-2.1
1,569,910	-		ABIE40_RS08140	0.69	+0.2
1,569,910	-		ABIE40_RS08140	0.69	-3.3
1,569,937	-		ABIE40_RS08140	0.70	-2.3
1,569,937	-		ABIE40_RS08140	0.70	-1.8
1,569,961	-		ABIE40_RS08140	0.71	-2.7
1,569,996	+		ABIE40_RS08140	0.72	-2.6
1,569,996	+		ABIE40_RS08140	0.72	-1.8
1,569,997	-		ABIE40_RS08140	0.72	-3.1
1,570,201	-		ABIE40_RS08140	0.77	-2.9
1,570,201	-		ABIE40_RS08140	0.77	+0.1
1,570,201	-		ABIE40_RS08140	0.77	-2.8
1,570,399	-		ABIE40_RS08140	0.82	-3.2
1,570,506	+		ABIE40_RS08140	0.85	-2.9
1,570,506	+		ABIE40_RS08140	0.85	-2.0
1,570,551	+		ABIE40_RS08140	0.86	-0.6
1,570,551	+		ABIE40_RS08140	0.86	-1.1
1,570,551	+		ABIE40_RS08140	0.86	-0.6
1,570,551	+		ABIE40_RS08140	0.86	-2.3
1,570,552	-		ABIE40_RS08140	0.86	-2.5
1,570,552	-		ABIE40_RS08140	0.86	+2.2
1,570,552	-		ABIE40_RS08140	0.86	-2.0
1,570,552	-		ABIE40_RS08140	0.86	-0.3
1,570,552	-		ABIE40_RS08140	0.86	-0.6
1,570,552	-		ABIE40_RS08140	0.86	-1.0
1,570,552	-		ABIE40_RS08140	0.86	-1.6
1,570,552	-		ABIE40_RS08140	0.86	-2.5
1,570,554	+		ABIE40_RS08140	0.86	-1.3
1,570,555	-		ABIE40_RS08140	0.86	-2.0
1,570,555	-		ABIE40_RS08140	0.86	-1.8
1,570,584	+		ABIE40_RS08140	0.87	-1.5
1,570,653	+		ABIE40_RS08140	0.89	-2.3
1,570,653	+		ABIE40_RS08140	0.89	-1.0
1,570,654	-		ABIE40_RS08140	0.89	-0.0
1,570,701	+				-1.2
1,570,701	+				-1.0
1,570,702	-				-1.7
1,570,702	-				-2.6
1,570,702	-				-1.2
1,570,702	-				-1.0
1,570,723	-				-1.6
1,570,723	-				-4.2
1,570,723	-				-2.0
1,570,903	-				-0.9
1,570,903	-				-2.7
1,570,903	-				-2.5
1,570,903	-				-0.5
1,570,903	-				-1.7
1,571,035	-				-2.0
1,571,035	-				-2.0
1,571,090	+				+1.0
1,571,091	-				-3.6
1,571,091	-				-2.5
1,571,173	-				+2.0
1,571,173	-				+0.1
1,571,179	-				+0.6
1,571,179	-				-0.2
1,571,179	-				-0.1
1,571,240	-				+0.2
1,571,257	+				-1.6
1,571,493	+				-0.2
1,571,494	-				+0.9
1,571,494	-				-0.8
1,571,494	-				+1.3
1,571,494	-				+0.6
1,571,643	+				+0.4
1,571,831	+		ABIE40_RS08145	0.27	+0.7
1,571,832	-		ABIE40_RS08145	0.28	+0.9
1,571,832	-		ABIE40_RS08145	0.28	-0.0
1,571,832	-		ABIE40_RS08145	0.28	+0.2
1,571,832	-		ABIE40_RS08145	0.28	+0.2
1,571,832	-		ABIE40_RS08145	0.28	+1.0
1,572,026	+		ABIE40_RS08145	0.60	+1.6
1,572,027	-		ABIE40_RS08145	0.60	-0.2
1,572,027	-		ABIE40_RS08145	0.60	+1.2