Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS06915

Experiment: D-Glucose-6-Phosphate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose-6-Phosphate (C)
1,355,155	+		ABIE40_RS06905	0.71	+0.7
1,355,155	+		ABIE40_RS06905	0.71	+0.3
1,355,155	+		ABIE40_RS06905	0.71	+1.1
1,355,156	-		ABIE40_RS06905	0.71	-0.3
1,355,280	+		ABIE40_RS06905	0.81	-0.0
1,355,310	+		ABIE40_RS06905	0.84	-0.2
1,355,310	+		ABIE40_RS06905	0.84	+1.1
1,355,310	+		ABIE40_RS06905	0.84	+1.6
1,355,310	+		ABIE40_RS06905	0.84	-0.1
1,355,311	-		ABIE40_RS06905	0.84	+0.1
1,355,311	-		ABIE40_RS06905	0.84	-0.9
1,355,311	-		ABIE40_RS06905	0.84	+0.0
1,355,311	-		ABIE40_RS06905	0.84	-0.6
1,355,311	-		ABIE40_RS06905	0.84	-1.5
1,355,383	+		ABIE40_RS06905	0.90	-0.3
1,355,383	+		ABIE40_RS06905	0.90	-0.4
1,355,384	-		ABIE40_RS06905	0.90	-3.7
1,355,384	-		ABIE40_RS06905	0.90	-1.0
1,355,384	-		ABIE40_RS06905	0.90	+1.1
1,355,447	-				+0.1
1,355,547	+				-1.0
1,355,548	-				-0.1
1,355,548	-				+0.1
1,355,548	-				+0.1
1,355,548	-				-0.5
1,355,549	+				+0.5
1,355,574	+				+1.3
1,355,626	+				-0.9
1,355,633	+				-1.4
1,355,633	+				-1.4
1,355,634	-				-0.7
1,355,634	-				+0.4
1,355,712	-		ABIE40_RS06910	0.38	+0.1
1,355,972	+				-2.8
1,355,972	+				-1.9
1,355,972	+				-1.6
1,355,973	-				-1.3
1,356,198	+		ABIE40_RS06915	0.22	-1.5
1,356,198	+		ABIE40_RS06915	0.22	-2.3
1,356,198	+		ABIE40_RS06915	0.22	-1.7
1,356,198	+		ABIE40_RS06915	0.22	-1.9
1,356,199	-		ABIE40_RS06915	0.22	-2.7
1,356,199	-		ABIE40_RS06915	0.22	-2.2
1,356,199	-		ABIE40_RS06915	0.22	-3.6
1,356,333	+		ABIE40_RS06915	0.34	-2.2
1,356,333	+		ABIE40_RS06915	0.34	-2.8
1,356,334	-		ABIE40_RS06915	0.34	-2.9
1,356,334	-		ABIE40_RS06915	0.34	-2.6
1,356,387	-		ABIE40_RS06915	0.39	-2.6
1,356,628	-		ABIE40_RS06915	0.61	-1.7
1,356,628	-		ABIE40_RS06915	0.61	-2.0
1,356,669	+		ABIE40_RS06915	0.64	-1.6
1,356,669	+		ABIE40_RS06915	0.64	-2.7
1,356,669	+		ABIE40_RS06915	0.64	-2.2
1,356,670	-		ABIE40_RS06915	0.64	-3.9
1,356,670	-		ABIE40_RS06915	0.64	-1.7
1,356,670	-		ABIE40_RS06915	0.64	-2.6
1,356,670	-		ABIE40_RS06915	0.64	-2.9
1,356,674	+		ABIE40_RS06915	0.65	-0.4
1,356,674	+		ABIE40_RS06915	0.65	-1.9
1,356,674	+		ABIE40_RS06915	0.65	-1.5
1,356,674	+		ABIE40_RS06915	0.65	-2.4
1,356,675	-		ABIE40_RS06915	0.65	-1.2
1,356,675	-		ABIE40_RS06915	0.65	-3.6
1,356,675	-		ABIE40_RS06915	0.65	-2.2
1,356,675	-		ABIE40_RS06915	0.65	-2.0
1,356,675	-		ABIE40_RS06915	0.65	-1.9
1,356,675	-		ABIE40_RS06915	0.65	-0.4
1,356,792	+		ABIE40_RS06915	0.76	-0.9
1,356,792	+		ABIE40_RS06915	0.76	-1.9
1,356,792	+		ABIE40_RS06915	0.76	-2.3
1,356,793	-		ABIE40_RS06915	0.76	+0.1
1,356,793	-		ABIE40_RS06915	0.76	+1.1
1,356,794	+		ABIE40_RS06915	0.76	-2.3
1,356,794	+		ABIE40_RS06915	0.76	-2.9
1,356,794	+		ABIE40_RS06915	0.76	-0.9
1,356,794	+		ABIE40_RS06915	0.76	+0.1
1,356,794	+		ABIE40_RS06915	0.76	-0.4
1,356,795	-		ABIE40_RS06915	0.76	-0.3
1,356,795	-		ABIE40_RS06915	0.76	-3.4
1,356,795	-		ABIE40_RS06915	0.76	-2.7
1,356,795	-		ABIE40_RS06915	0.76	-2.6
1,356,795	-		ABIE40_RS06915	0.76	-2.6
1,356,892	+		ABIE40_RS06915	0.85	-1.1
1,356,892	+		ABIE40_RS06915	0.85	-0.8
1,356,893	-		ABIE40_RS06915	0.85	-2.7
1,356,893	-		ABIE40_RS06915	0.85	-2.3
1,356,893	-		ABIE40_RS06915	0.85	-1.2
1,357,017	+				+1.1
1,357,017	+				+0.1
1,357,018	-				-0.5
1,357,018	-				-0.7
1,357,070	+				-0.4
1,357,087	+				-0.9
1,357,088	-				+1.1
1,357,215	-				-0.4
1,357,215	-				+0.2
1,357,303	-		ABIE40_RS06920	0.20	+0.2
1,357,304	+		ABIE40_RS06920	0.20	-0.1
1,357,304	+		ABIE40_RS06920	0.20	-0.2
1,357,305	-		ABIE40_RS06920	0.21	-0.7
1,357,305	-		ABIE40_RS06920	0.21	+1.8
1,357,323	+		ABIE40_RS06920	0.25	+0.2
1,357,323	+		ABIE40_RS06920	0.25	-0.1
1,357,323	+		ABIE40_RS06920	0.25	+1.2
1,357,324	-		ABIE40_RS06920	0.25	+0.3
1,357,324	-		ABIE40_RS06920	0.25	-0.4
1,357,324	-		ABIE40_RS06920	0.25	-1.0
1,357,324	-		ABIE40_RS06920	0.25	+0.9
1,357,324	-		ABIE40_RS06920	0.25	+0.1
1,357,325	+		ABIE40_RS06920	0.25	-0.4
1,357,325	+		ABIE40_RS06920	0.25	-1.0
1,357,452	+		ABIE40_RS06920	0.57	-0.2
1,357,452	+		ABIE40_RS06920	0.57	-0.5
1,357,453	-		ABIE40_RS06920	0.57	-1.3
1,357,502	+		ABIE40_RS06920	0.69	-0.1
1,357,502	+		ABIE40_RS06920	0.69	+0.1
1,357,503	-		ABIE40_RS06920	0.69	+1.1
1,357,503	-		ABIE40_RS06920	0.69	+0.7
1,357,503	-		ABIE40_RS06920	0.69	+1.1
1,357,686	+				-0.4
1,357,686	+				+0.2
1,357,686	+				+0.8
1,357,686	+				-0.0
1,357,687	-				-1.1
1,357,687	-				-0.2
1,357,759	-		ABIE40_RS06925	0.17	+0.1
1,357,759	-		ABIE40_RS06925	0.17	+1.5
1,357,819	-		ABIE40_RS06925	0.24	+0.8
1,357,819	-		ABIE40_RS06925	0.24	+1.2
1,357,819	-		ABIE40_RS06925	0.24	+2.1
1,357,821	+		ABIE40_RS06925	0.25	-0.2
1,357,821	+		ABIE40_RS06925	0.25	-1.9
1,357,822	-		ABIE40_RS06925	0.25	-0.9
1,357,822	-		ABIE40_RS06925	0.25	-1.2
1,357,822	-		ABIE40_RS06925	0.25	+3.1
1,357,822	-		ABIE40_RS06925	0.25	-0.3
1,357,857	+		ABIE40_RS06925	0.29	+1.2
1,357,857	+		ABIE40_RS06925	0.29	-0.5
1,357,857	+		ABIE40_RS06925	0.29	-1.2
1,357,858	-		ABIE40_RS06925	0.29	-0.3
1,357,911	+		ABIE40_RS06925	0.36	+0.4
1,357,912	-		ABIE40_RS06925	0.36	+0.5
1,357,912	-		ABIE40_RS06925	0.36	-0.9
1,358,010	+		ABIE40_RS06925	0.49	+0.2