Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS05995

Experiment: D-Glucose-6-Phosphate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose-6-Phosphate (C)
1,177,820	-		ABIE40_RS05990	0.60	-1.3
1,178,008	+		ABIE40_RS05990	0.70	-0.5
1,178,008	+		ABIE40_RS05990	0.70	-0.1
1,178,008	+		ABIE40_RS05990	0.70	+0.5
1,178,008	+		ABIE40_RS05990	0.70	-0.0
1,178,008	+		ABIE40_RS05990	0.70	+0.3
1,178,008	+		ABIE40_RS05990	0.70	+1.4
1,178,009	-		ABIE40_RS05990	0.70	-0.2
1,178,009	-		ABIE40_RS05990	0.70	+0.1
1,178,009	-		ABIE40_RS05990	0.70	+1.0
1,178,201	+		ABIE40_RS05990	0.80	-0.2
1,178,442	-				-0.0
1,178,516	-				+0.7
1,178,589	+				-0.7
1,178,589	+				+0.7
1,178,589	+				-1.6
1,178,590	-				-0.2
1,178,590	-				-0.2
1,178,590	-				-0.3
1,178,594	+				-0.2
1,178,594	+				-0.4
1,178,594	+				-1.2
1,178,594	+				+0.5
1,178,594	+				+0.0
1,178,594	+				-1.3
1,178,595	-				-0.7
1,178,595	-				+0.1
1,178,595	-				-0.4
1,178,595	-				-0.2
1,178,595	-				+0.6
1,178,595	-				+1.1
1,178,595	-				+0.1
1,178,595	-				+1.0
1,178,595	-				+0.8
1,178,595	-				-0.5
1,178,595	-				-0.5
1,178,595	-				+1.4
1,178,595	-				+0.8
1,178,595	-				+1.0
1,178,597	+				+0.1
1,178,597	+				-0.2
1,178,598	-				+1.1
1,178,598	-				-1.9
1,178,598	-				+0.5
1,178,598	-				-0.4
1,178,938	-		ABIE40_RS05995	0.29	-0.0
1,179,057	+		ABIE40_RS05995	0.42	-1.5
1,179,057	+		ABIE40_RS05995	0.42	-1.2
1,179,057	+		ABIE40_RS05995	0.42	-1.0
1,179,057	+		ABIE40_RS05995	0.42	+0.2
1,179,057	+		ABIE40_RS05995	0.42	-2.0
1,179,057	+		ABIE40_RS05995	0.42	-1.9
1,179,057	+		ABIE40_RS05995	0.42	-3.2
1,179,057	+		ABIE40_RS05995	0.42	-0.7
1,179,057	+		ABIE40_RS05995	0.42	-1.2
1,179,058	-		ABIE40_RS05995	0.42	-0.9
1,179,058	-		ABIE40_RS05995	0.42	-0.4
1,179,058	-		ABIE40_RS05995	0.42	-1.0
1,179,058	-		ABIE40_RS05995	0.42	-1.9
1,179,058	-		ABIE40_RS05995	0.42	-3.7
1,179,058	-		ABIE40_RS05995	0.42	-1.3
1,179,058	-		ABIE40_RS05995	0.42	-0.0
1,179,058	-		ABIE40_RS05995	0.42	-1.3
1,179,064	+		ABIE40_RS05995	0.43	-0.9
1,179,065	-		ABIE40_RS05995	0.43	-2.1
1,179,082	-		ABIE40_RS05995	0.45	-2.8
1,179,105	+		ABIE40_RS05995	0.48	-1.3
1,179,105	+		ABIE40_RS05995	0.48	-1.9
1,179,105	+		ABIE40_RS05995	0.48	-2.4
1,179,105	+		ABIE40_RS05995	0.48	-1.3
1,179,106	-		ABIE40_RS05995	0.48	-0.9
1,179,106	-		ABIE40_RS05995	0.48	-1.5
1,179,106	-		ABIE40_RS05995	0.48	-2.1
1,179,106	-		ABIE40_RS05995	0.48	-1.9
1,179,106	-		ABIE40_RS05995	0.48	-1.7
1,179,106	-		ABIE40_RS05995	0.48	+0.3
1,179,276	+		ABIE40_RS05995	0.67	-1.3
1,179,276	+		ABIE40_RS05995	0.67	+1.4
1,179,277	-		ABIE40_RS05995	0.67	-1.7
1,179,277	-		ABIE40_RS05995	0.67	-1.8
1,179,277	-		ABIE40_RS05995	0.67	-3.2
1,179,277	-		ABIE40_RS05995	0.67	-1.2
1,179,277	-		ABIE40_RS05995	0.67	-1.6
1,179,277	-		ABIE40_RS05995	0.67	-1.5
1,179,277	-		ABIE40_RS05995	0.67	-0.0
1,179,281	+		ABIE40_RS05995	0.68	-3.8
1,179,281	+		ABIE40_RS05995	0.68	-1.2
1,179,281	+		ABIE40_RS05995	0.68	-2.9
1,179,281	+		ABIE40_RS05995	0.68	-1.1
1,179,281	+		ABIE40_RS05995	0.68	-1.9
1,179,282	-		ABIE40_RS05995	0.68	-1.0
1,179,282	-		ABIE40_RS05995	0.68	-1.8
1,179,588	-				-0.5
1,179,608	+				-0.3
1,179,672	+				+0.1
1,179,674	+				-0.9
1,179,674	+				+1.3
1,179,675	-				+1.4
1,179,765	-				-0.4
1,179,788	+				-0.0
1,179,788	+				-1.3
1,179,788	+				-0.1
1,179,788	+				+0.7
1,179,789	-				-1.3
1,179,789	-				+0.4
1,179,789	-				+1.4
1,179,789	-				-0.4
1,179,789	-				-0.8
1,179,809	-				-1.2
1,179,809	-				+2.4
1,180,005	+		ABIE40_RS06000	0.21	-0.4
1,180,014	+		ABIE40_RS06000	0.22	-0.2
1,180,014	+		ABIE40_RS06000	0.22	+2.1
1,180,014	+		ABIE40_RS06000	0.22	-0.4
1,180,014	+		ABIE40_RS06000	0.22	-0.8
1,180,014	+		ABIE40_RS06000	0.22	-0.0
1,180,015	-		ABIE40_RS06000	0.22	-0.7
1,180,015	-		ABIE40_RS06000	0.22	+0.9
1,180,096	+		ABIE40_RS06000	0.29	-0.9
1,180,097	-		ABIE40_RS06000	0.29	+0.4
1,180,133	+		ABIE40_RS06000	0.32	+0.3
1,180,160	-		ABIE40_RS06000	0.35	-1.9
1,180,165	+		ABIE40_RS06000	0.35	+0.9
1,180,165	+		ABIE40_RS06000	0.35	+0.1
1,180,165	+		ABIE40_RS06000	0.35	-0.0
1,180,165	+		ABIE40_RS06000	0.35	+0.1
1,180,165	+		ABIE40_RS06000	0.35	-1.5
1,180,165	+		ABIE40_RS06000	0.35	-0.8
1,180,166	-		ABIE40_RS06000	0.35	+3.0
1,180,166	-		ABIE40_RS06000	0.35	+1.9
1,180,166	-		ABIE40_RS06000	0.35	-0.6
1,180,166	-		ABIE40_RS06000	0.35	-0.5
1,180,166	-		ABIE40_RS06000	0.35	-0.4
1,180,166	-		ABIE40_RS06000	0.35	+0.6
1,180,166	-		ABIE40_RS06000	0.35	+0.2
1,180,168	-		ABIE40_RS06000	0.36	+0.8
1,180,168	-		ABIE40_RS06000	0.36	-0.3
1,180,237	-		ABIE40_RS06000	0.42	+1.4
1,180,288	+		ABIE40_RS06000	0.46	+0.6
1,180,288	+		ABIE40_RS06000	0.46	-0.4
1,180,289	-		ABIE40_RS06000	0.46	+1.4
1,180,392	+		ABIE40_RS06000	0.56	+0.2
1,180,392	+		ABIE40_RS06000	0.56	-1.2
1,180,393	-		ABIE40_RS06000	0.56	+0.3
1,180,393	-		ABIE40_RS06000	0.56	+1.2
1,180,393	-		ABIE40_RS06000	0.56	-0.3
1,180,398	+		ABIE40_RS06000	0.56	-0.4
1,180,398	+		ABIE40_RS06000	0.56	-0.9
1,180,398	+		ABIE40_RS06000	0.56	-0.6
1,180,398	+		ABIE40_RS06000	0.56	-0.4
1,180,398	+		ABIE40_RS06000	0.56	-0.5
1,180,398	+		ABIE40_RS06000	0.56	-0.3
1,180,398	+		ABIE40_RS06000	0.56	+0.0
1,180,398	+		ABIE40_RS06000	0.56	-0.5
1,180,398	+		ABIE40_RS06000	0.56	-0.8
1,180,398	+		ABIE40_RS06000	0.56	+0.3
1,180,398	+		ABIE40_RS06000	0.56	+0.0
1,180,398	+		ABIE40_RS06000	0.56	+1.0
1,180,399	-		ABIE40_RS06000	0.56	-0.3
1,180,399	-		ABIE40_RS06000	0.56	+0.6
1,180,399	-		ABIE40_RS06000	0.56	-0.7
1,180,399	-		ABIE40_RS06000	0.56	+1.0
1,180,399	-		ABIE40_RS06000	0.56	-0.5
1,180,399	-		ABIE40_RS06000	0.56	-1.6
1,180,399	-		ABIE40_RS06000	0.56	-0.2
1,180,399	-		ABIE40_RS06000	0.56	-2.1
1,180,399	-		ABIE40_RS06000	0.56	-0.6
1,180,412	-		ABIE40_RS06000	0.58	-0.3