Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS04315 and ABIE40_RS04320 are separated by 414 nucleotides ABIE40_RS04320 and ABIE40_RS04325 are separated by 12 nucleotides ABIE40_RS04325 and ABIE40_RS04330 are separated by 98 nucleotides
ABIE40_RS04315: ABIE40_RS04315 - chromosome segregation protein SMC, at 849,420 to 852,881
_RS04315
ABIE40_RS04320: ABIE40_RS04320 - pyruvate, phosphate dikinase, at 853,296 to 855,962
_RS04320
ABIE40_RS04325: ABIE40_RS04325 - hypothetical protein, at 855,975 to 856,250
_RS04325
ABIE40_RS04330: ABIE40_RS04330 - hypothetical protein, at 856,349 to 856,738
_RS04330
Position (kb) 853
854
855
856 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 852.342 kb on - strand, within ABIE40_RS04315 at 852.342 kb on - strand, within ABIE40_RS04315 at 852.622 kb on + strand at 852.835 kb on + strand at 852.915 kb on + strand at 853.040 kb on + strand at 853.040 kb on + strand at 853.040 kb on + strand at 853.041 kb on - strand at 853.041 kb on - strand at 853.081 kb on + strand at 853.081 kb on + strand at 853.081 kb on + strand at 853.081 kb on + strand at 853.082 kb on - strand at 853.082 kb on - strand at 853.082 kb on - strand at 853.121 kb on + strand at 853.121 kb on + strand at 853.121 kb on + strand at 853.122 kb on - strand at 853.311 kb on + strand at 853.311 kb on + strand at 853.312 kb on - strand at 853.313 kb on + strand at 853.313 kb on + strand at 853.313 kb on + strand at 853.313 kb on + strand at 853.314 kb on - strand at 853.314 kb on - strand at 853.455 kb on + strand at 853.456 kb on - strand at 853.456 kb on - strand at 853.456 kb on - strand at 853.456 kb on - strand at 853.456 kb on - strand at 853.456 kb on - strand at 853.458 kb on + strand at 853.458 kb on + strand at 853.458 kb on + strand at 853.458 kb on + strand at 853.458 kb on + strand at 853.459 kb on - strand at 853.459 kb on - strand at 853.459 kb on - strand at 853.459 kb on - strand at 853.459 kb on - strand at 853.472 kb on + strand at 853.472 kb on + strand at 853.473 kb on - strand at 853.619 kb on + strand, within ABIE40_RS04320 at 853.619 kb on + strand, within ABIE40_RS04320 at 853.620 kb on - strand, within ABIE40_RS04320 at 853.620 kb on - strand, within ABIE40_RS04320 at 853.620 kb on - strand, within ABIE40_RS04320 at 853.620 kb on - strand, within ABIE40_RS04320 at 853.700 kb on + strand, within ABIE40_RS04320 at 853.700 kb on + strand, within ABIE40_RS04320 at 853.701 kb on - strand, within ABIE40_RS04320 at 853.701 kb on - strand, within ABIE40_RS04320 at 853.701 kb on - strand, within ABIE40_RS04320 at 853.701 kb on - strand, within ABIE40_RS04320 at 853.704 kb on + strand, within ABIE40_RS04320 at 853.704 kb on + strand, within ABIE40_RS04320 at 853.704 kb on + strand, within ABIE40_RS04320 at 853.704 kb on + strand, within ABIE40_RS04320 at 853.705 kb on - strand, within ABIE40_RS04320 at 853.705 kb on - strand, within ABIE40_RS04320 at 853.725 kb on + strand, within ABIE40_RS04320 at 853.725 kb on + strand, within ABIE40_RS04320 at 853.725 kb on + strand, within ABIE40_RS04320 at 853.725 kb on + strand, within ABIE40_RS04320 at 853.725 kb on + strand, within ABIE40_RS04320 at 853.725 kb on + strand, within ABIE40_RS04320 at 853.725 kb on + strand, within ABIE40_RS04320 at 853.725 kb on + strand, within ABIE40_RS04320 at 853.726 kb on - strand, within ABIE40_RS04320 at 853.726 kb on - strand, within ABIE40_RS04320 at 853.726 kb on - strand, within ABIE40_RS04320 at 853.726 kb on - strand, within ABIE40_RS04320 at 853.726 kb on - strand, within ABIE40_RS04320 at 853.726 kb on - strand, within ABIE40_RS04320 at 853.726 kb on - strand, within ABIE40_RS04320 at 853.726 kb on - strand, within ABIE40_RS04320 at 853.726 kb on - strand, within ABIE40_RS04320 at 853.807 kb on - strand, within ABIE40_RS04320 at 853.807 kb on - strand, within ABIE40_RS04320 at 853.807 kb on - strand, within ABIE40_RS04320 at 853.807 kb on - strand, within ABIE40_RS04320 at 853.807 kb on - strand, within ABIE40_RS04320 at 853.841 kb on + strand, within ABIE40_RS04320 at 853.841 kb on + strand, within ABIE40_RS04320 at 853.841 kb on + strand, within ABIE40_RS04320 at 853.842 kb on - strand, within ABIE40_RS04320 at 853.842 kb on - strand, within ABIE40_RS04320 at 853.855 kb on - strand, within ABIE40_RS04320 at 853.971 kb on + strand, within ABIE40_RS04320 at 853.971 kb on + strand, within ABIE40_RS04320 at 853.972 kb on - strand, within ABIE40_RS04320 at 853.988 kb on + strand, within ABIE40_RS04320 at 853.988 kb on + strand, within ABIE40_RS04320 at 853.988 kb on + strand, within ABIE40_RS04320 at 853.988 kb on + strand, within ABIE40_RS04320 at 853.989 kb on - strand, within ABIE40_RS04320 at 854.109 kb on + strand, within ABIE40_RS04320 at 854.109 kb on + strand, within ABIE40_RS04320 at 854.110 kb on - strand, within ABIE40_RS04320 at 854.110 kb on - strand, within ABIE40_RS04320 at 854.110 kb on - strand, within ABIE40_RS04320 at 854.110 kb on - strand, within ABIE40_RS04320 at 854.110 kb on - strand, within ABIE40_RS04320 at 854.162 kb on + strand, within ABIE40_RS04320 at 854.163 kb on - strand, within ABIE40_RS04320 at 854.396 kb on + strand, within ABIE40_RS04320 at 854.397 kb on - strand, within ABIE40_RS04320 at 854.397 kb on - strand, within ABIE40_RS04320 at 854.639 kb on + strand, within ABIE40_RS04320 at 854.639 kb on + strand, within ABIE40_RS04320 at 854.640 kb on - strand, within ABIE40_RS04320 at 854.640 kb on - strand, within ABIE40_RS04320 at 854.759 kb on + strand, within ABIE40_RS04320 at 854.760 kb on - strand, within ABIE40_RS04320 at 854.760 kb on - strand, within ABIE40_RS04320 at 854.957 kb on + strand, within ABIE40_RS04320 at 855.002 kb on + strand, within ABIE40_RS04320 at 855.002 kb on + strand, within ABIE40_RS04320 at 855.351 kb on + strand, within ABIE40_RS04320 at 855.481 kb on - strand, within ABIE40_RS04320 at 855.481 kb on - strand, within ABIE40_RS04320 at 855.501 kb on - strand, within ABIE40_RS04320 at 855.501 kb on - strand, within ABIE40_RS04320 at 855.546 kb on + strand, within ABIE40_RS04320 at 855.546 kb on + strand, within ABIE40_RS04320 at 855.547 kb on - strand, within ABIE40_RS04320 at 855.547 kb on - strand, within ABIE40_RS04320 at 855.699 kb on + strand at 855.699 kb on + strand at 855.699 kb on + strand at 855.700 kb on - strand at 855.700 kb on - strand at 855.700 kb on - strand at 855.727 kb on + strand at 855.885 kb on + strand at 855.885 kb on + strand at 855.885 kb on + strand at 855.886 kb on - strand at 855.886 kb on - strand at 855.977 kb on - strand at 855.985 kb on + strand at 855.988 kb on + strand at 855.988 kb on + strand at 855.988 kb on + strand at 855.988 kb on + strand at 855.989 kb on - strand at 855.989 kb on - strand at 855.991 kb on + strand at 855.992 kb on - strand at 855.992 kb on - strand at 856.003 kb on + strand, within ABIE40_RS04325 at 856.003 kb on + strand, within ABIE40_RS04325 at 856.003 kb on + strand, within ABIE40_RS04325 at 856.003 kb on + strand, within ABIE40_RS04325 at 856.004 kb on - strand, within ABIE40_RS04325 at 856.004 kb on - strand, within ABIE40_RS04325 at 856.135 kb on + strand, within ABIE40_RS04325 at 856.135 kb on + strand, within ABIE40_RS04325 at 856.253 kb on + strand at 856.253 kb on + strand at 856.253 kb on + strand at 856.253 kb on + strand at 856.253 kb on + strand at 856.253 kb on + strand at 856.253 kb on + strand at 856.254 kb on - strand at 856.254 kb on - strand at 856.254 kb on - strand at 856.254 kb on - strand at 856.254 kb on - strand at 856.254 kb on - strand at 856.254 kb on - strand at 856.254 kb on - strand at 856.254 kb on - strand at 856.254 kb on - strand at 856.254 kb on - strand at 856.621 kb on + strand, within ABIE40_RS04330 at 856.621 kb on + strand, within ABIE40_RS04330 at 856.622 kb on - strand, within ABIE40_RS04330 at 856.622 kb on - strand, within ABIE40_RS04330 at 856.623 kb on + strand, within ABIE40_RS04330 at 856.623 kb on + strand, within ABIE40_RS04330 at 856.624 kb on - strand, within ABIE40_RS04330 at 856.624 kb on - strand, within ABIE40_RS04330 at 856.624 kb on - strand, within ABIE40_RS04330 at 856.825 kb on + strand at 856.825 kb on + strand at 856.826 kb on - strand at 856.833 kb on - strand at 856.928 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 852,342 - ABIE40_RS04315 0.84 -0.3 852,342 - ABIE40_RS04315 0.84 -0.2 852,622 + +0.9 852,835 + +0.7 852,915 + -0.4 853,040 + +0.8 853,040 + +1.6 853,040 + -1.2 853,041 - -1.1 853,041 - -1.0 853,081 + -0.4 853,081 + -1.2 853,081 + +2.6 853,081 + +2.0 853,082 - -2.2 853,082 - -0.5 853,082 - -0.2 853,121 + -1.0 853,121 + -0.6 853,121 + +0.8 853,122 - -0.8 853,311 + -3.3 853,311 + -3.5 853,312 - -0.7 853,313 + +1.6 853,313 + -2.2 853,313 + -2.7 853,313 + -3.8 853,314 - -3.6 853,314 - -1.8 853,455 + -1.0 853,456 - -3.7 853,456 - -2.1 853,456 - -1.0 853,456 - -3.8 853,456 - -0.4 853,456 - -2.7 853,458 + -2.4 853,458 + -2.9 853,458 + -2.3 853,458 + -1.7 853,458 + -3.2 853,459 - -3.2 853,459 - -1.1 853,459 - -1.4 853,459 - -2.4 853,459 - -0.9 853,472 + -2.5 853,472 + -2.6 853,473 - -0.2 853,619 + ABIE40_RS04320 0.12 -1.6 853,619 + ABIE40_RS04320 0.12 -1.4 853,620 - ABIE40_RS04320 0.12 +1.6 853,620 - ABIE40_RS04320 0.12 -2.7 853,620 - ABIE40_RS04320 0.12 -1.2 853,620 - ABIE40_RS04320 0.12 -2.2 853,700 + ABIE40_RS04320 0.15 -2.9 853,700 + ABIE40_RS04320 0.15 -0.7 853,701 - ABIE40_RS04320 0.15 -1.9 853,701 - ABIE40_RS04320 0.15 -1.9 853,701 - ABIE40_RS04320 0.15 -2.8 853,701 - ABIE40_RS04320 0.15 -0.3 853,704 + ABIE40_RS04320 0.15 -3.8 853,704 + ABIE40_RS04320 0.15 +0.2 853,704 + ABIE40_RS04320 0.15 -1.6 853,704 + ABIE40_RS04320 0.15 -1.3 853,705 - ABIE40_RS04320 0.15 -4.1 853,705 - ABIE40_RS04320 0.15 -2.8 853,725 + ABIE40_RS04320 0.16 -2.7 853,725 + ABIE40_RS04320 0.16 -3.5 853,725 + ABIE40_RS04320 0.16 -2.9 853,725 + ABIE40_RS04320 0.16 -1.0 853,725 + ABIE40_RS04320 0.16 -2.9 853,725 + ABIE40_RS04320 0.16 -1.8 853,725 + ABIE40_RS04320 0.16 +0.3 853,725 + ABIE40_RS04320 0.16 -3.7 853,726 - ABIE40_RS04320 0.16 -3.7 853,726 - ABIE40_RS04320 0.16 -0.0 853,726 - ABIE40_RS04320 0.16 -3.5 853,726 - ABIE40_RS04320 0.16 -4.1 853,726 - ABIE40_RS04320 0.16 -4.0 853,726 - ABIE40_RS04320 0.16 -2.2 853,726 - ABIE40_RS04320 0.16 -3.4 853,726 - ABIE40_RS04320 0.16 -2.6 853,726 - ABIE40_RS04320 0.16 -4.4 853,807 - ABIE40_RS04320 0.19 -1.4 853,807 - ABIE40_RS04320 0.19 -2.0 853,807 - ABIE40_RS04320 0.19 -2.7 853,807 - ABIE40_RS04320 0.19 -1.8 853,807 - ABIE40_RS04320 0.19 -2.8 853,841 + ABIE40_RS04320 0.20 -3.4 853,841 + ABIE40_RS04320 0.20 -1.5 853,841 + ABIE40_RS04320 0.20 -2.4 853,842 - ABIE40_RS04320 0.20 -3.6 853,842 - ABIE40_RS04320 0.20 -0.2 853,855 - ABIE40_RS04320 0.21 -2.4 853,971 + ABIE40_RS04320 0.25 -3.6 853,971 + ABIE40_RS04320 0.25 -4.0 853,972 - ABIE40_RS04320 0.25 -2.3 853,988 + ABIE40_RS04320 0.26 -1.7 853,988 + ABIE40_RS04320 0.26 -2.3 853,988 + ABIE40_RS04320 0.26 -3.3 853,988 + ABIE40_RS04320 0.26 -2.7 853,989 - ABIE40_RS04320 0.26 -0.0 854,109 + ABIE40_RS04320 0.30 -4.0 854,109 + ABIE40_RS04320 0.30 -2.9 854,110 - ABIE40_RS04320 0.31 -2.8 854,110 - ABIE40_RS04320 0.31 -2.7 854,110 - ABIE40_RS04320 0.31 -3.2 854,110 - ABIE40_RS04320 0.31 -1.4 854,110 - ABIE40_RS04320 0.31 -3.3 854,162 + ABIE40_RS04320 0.32 -1.4 854,163 - ABIE40_RS04320 0.33 -2.7 854,396 + ABIE40_RS04320 0.41 -0.7 854,397 - ABIE40_RS04320 0.41 -3.1 854,397 - ABIE40_RS04320 0.41 -2.8 854,639 + ABIE40_RS04320 0.50 -3.4 854,639 + ABIE40_RS04320 0.50 -3.2 854,640 - ABIE40_RS04320 0.50 -2.5 854,640 - ABIE40_RS04320 0.50 -2.7 854,759 + ABIE40_RS04320 0.55 -3.9 854,760 - ABIE40_RS04320 0.55 -3.6 854,760 - ABIE40_RS04320 0.55 -1.4 854,957 + ABIE40_RS04320 0.62 -0.5 855,002 + ABIE40_RS04320 0.64 +2.2 855,002 + ABIE40_RS04320 0.64 -1.6 855,351 + ABIE40_RS04320 0.77 -1.0 855,481 - ABIE40_RS04320 0.82 -2.5 855,481 - ABIE40_RS04320 0.82 -3.1 855,501 - ABIE40_RS04320 0.83 -3.6 855,501 - ABIE40_RS04320 0.83 -2.4 855,546 + ABIE40_RS04320 0.84 -1.8 855,546 + ABIE40_RS04320 0.84 -2.3 855,547 - ABIE40_RS04320 0.84 -3.5 855,547 - ABIE40_RS04320 0.84 -1.0 855,699 + -2.6 855,699 + -2.8 855,699 + -2.1 855,700 - -1.4 855,700 - -2.3 855,700 - -3.1 855,727 + -4.1 855,885 + -3.2 855,885 + -1.0 855,885 + +0.6 855,886 - -4.0 855,886 - -2.2 855,977 - -0.0 855,985 + +0.2 855,988 + +1.2 855,988 + -0.6 855,988 + -0.4 855,988 + +0.2 855,989 - -1.2 855,989 - -0.2 855,991 + +0.9 855,992 - -0.3 855,992 - +0.4 856,003 + ABIE40_RS04325 0.10 -1.1 856,003 + ABIE40_RS04325 0.10 -1.7 856,003 + ABIE40_RS04325 0.10 +1.6 856,003 + ABIE40_RS04325 0.10 -0.4 856,004 - ABIE40_RS04325 0.11 +2.0 856,004 - ABIE40_RS04325 0.11 -0.0 856,135 + ABIE40_RS04325 0.58 -0.5 856,135 + ABIE40_RS04325 0.58 -0.2 856,253 + -0.1 856,253 + -0.5 856,253 + -0.4 856,253 + +1.0 856,253 + +1.6 856,253 + +0.6 856,253 + +0.1 856,254 - -0.2 856,254 - -0.4 856,254 - +1.1 856,254 - -1.6 856,254 - -1.1 856,254 - +0.1 856,254 - -1.5 856,254 - -0.8 856,254 - -0.7 856,254 - +1.3 856,254 - -0.3 856,621 + ABIE40_RS04330 0.70 -0.9 856,621 + ABIE40_RS04330 0.70 +0.6 856,622 - ABIE40_RS04330 0.70 -0.4 856,622 - ABIE40_RS04330 0.70 -1.7 856,623 + ABIE40_RS04330 0.70 +0.0 856,623 + ABIE40_RS04330 0.70 -0.1 856,624 - ABIE40_RS04330 0.71 +1.6 856,624 - ABIE40_RS04330 0.71 -1.5 856,624 - ABIE40_RS04330 0.71 -0.7 856,825 + -0.9 856,825 + -0.3 856,826 - -1.4 856,833 - +0.6 856,928 - -0.3
Or see this region's nucleotide sequence