Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS02565 and ABIE40_RS02570 are separated by 189 nucleotides ABIE40_RS02570 and ABIE40_RS02575 are separated by 60 nucleotides ABIE40_RS02575 and ABIE40_RS02580 are separated by 156 nucleotides ABIE40_RS02580 and ABIE40_RS02585 are separated by 37 nucleotides
ABIE40_RS02565: ABIE40_RS02565 - VOC family protein, at 507,489 to 507,965
_RS02565
ABIE40_RS02570: ABIE40_RS02570 - hypothetical protein, at 508,155 to 508,343
_RS02570
ABIE40_RS02575: ABIE40_RS02575 - hypothetical protein, at 508,404 to 508,706
_RS02575
ABIE40_RS02580: ABIE40_RS02580 - acyl-CoA dehydrogenase C-terminal domain-containing protein, at 508,863 to 510,659
_RS02580
ABIE40_RS02585: ABIE40_RS02585 - acetyl-CoA C-acetyltransferase, at 510,697 to 511,905
_RS02585
Position (kb) 508
509
510
511 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 507.904 kb on + strand, within ABIE40_RS02565 at 507.905 kb on - strand, within ABIE40_RS02565 at 507.905 kb on - strand, within ABIE40_RS02565 at 507.905 kb on - strand, within ABIE40_RS02565 at 507.905 kb on - strand, within ABIE40_RS02565 at 507.905 kb on - strand, within ABIE40_RS02565 at 508.060 kb on + strand at 508.113 kb on - strand at 508.342 kb on - strand at 508.342 kb on - strand at 508.347 kb on + strand at 508.347 kb on + strand at 508.347 kb on + strand at 508.347 kb on + strand at 508.347 kb on + strand at 508.348 kb on - strand at 508.360 kb on + strand at 508.393 kb on + strand at 508.394 kb on + strand at 508.394 kb on + strand at 508.394 kb on + strand at 508.394 kb on + strand at 508.394 kb on + strand at 508.394 kb on + strand at 508.395 kb on - strand at 508.395 kb on - strand at 508.395 kb on - strand at 508.395 kb on - strand at 508.433 kb on + strand at 508.433 kb on + strand at 508.434 kb on - strand at 508.611 kb on + strand, within ABIE40_RS02575 at 508.611 kb on + strand, within ABIE40_RS02575 at 508.785 kb on + strand at 508.785 kb on + strand at 508.807 kb on - strand at 508.807 kb on - strand at 508.807 kb on - strand at 508.873 kb on - strand at 508.873 kb on - strand at 508.873 kb on - strand at 508.874 kb on + strand at 508.874 kb on + strand at 508.875 kb on - strand at 508.875 kb on - strand at 508.932 kb on + strand at 508.932 kb on + strand at 508.933 kb on - strand at 508.933 kb on - strand at 509.034 kb on + strand at 509.034 kb on + strand at 509.034 kb on + strand at 509.034 kb on + strand at 509.034 kb on + strand at 509.034 kb on + strand at 509.035 kb on - strand at 509.035 kb on - strand at 509.035 kb on - strand at 509.109 kb on + strand, within ABIE40_RS02580 at 509.109 kb on + strand, within ABIE40_RS02580 at 509.109 kb on + strand, within ABIE40_RS02580 at 509.109 kb on + strand, within ABIE40_RS02580 at 509.109 kb on + strand, within ABIE40_RS02580 at 509.109 kb on + strand, within ABIE40_RS02580 at 509.110 kb on - strand, within ABIE40_RS02580 at 509.110 kb on - strand, within ABIE40_RS02580 at 509.110 kb on - strand, within ABIE40_RS02580 at 509.118 kb on + strand, within ABIE40_RS02580 at 509.119 kb on - strand, within ABIE40_RS02580 at 509.119 kb on - strand, within ABIE40_RS02580 at 509.181 kb on + strand, within ABIE40_RS02580 at 509.182 kb on - strand, within ABIE40_RS02580 at 509.182 kb on - strand, within ABIE40_RS02580 at 509.182 kb on - strand, within ABIE40_RS02580 at 509.182 kb on - strand, within ABIE40_RS02580 at 509.209 kb on - strand, within ABIE40_RS02580 at 509.241 kb on + strand, within ABIE40_RS02580 at 509.241 kb on + strand, within ABIE40_RS02580 at 509.241 kb on + strand, within ABIE40_RS02580 at 509.242 kb on - strand, within ABIE40_RS02580 at 509.242 kb on - strand, within ABIE40_RS02580 at 509.242 kb on - strand, within ABIE40_RS02580 at 509.242 kb on - strand, within ABIE40_RS02580 at 509.242 kb on - strand, within ABIE40_RS02580 at 509.310 kb on + strand, within ABIE40_RS02580 at 509.311 kb on - strand, within ABIE40_RS02580 at 509.311 kb on - strand, within ABIE40_RS02580 at 509.311 kb on - strand, within ABIE40_RS02580 at 509.311 kb on - strand, within ABIE40_RS02580 at 509.311 kb on - strand, within ABIE40_RS02580 at 509.311 kb on - strand, within ABIE40_RS02580 at 509.427 kb on + strand, within ABIE40_RS02580 at 509.427 kb on + strand, within ABIE40_RS02580 at 509.428 kb on - strand, within ABIE40_RS02580 at 509.428 kb on - strand, within ABIE40_RS02580 at 509.428 kb on - strand, within ABIE40_RS02580 at 509.428 kb on - strand, within ABIE40_RS02580 at 509.486 kb on + strand, within ABIE40_RS02580 at 509.487 kb on - strand, within ABIE40_RS02580 at 509.531 kb on + strand, within ABIE40_RS02580 at 509.670 kb on + strand, within ABIE40_RS02580 at 509.670 kb on + strand, within ABIE40_RS02580 at 509.670 kb on + strand, within ABIE40_RS02580 at 509.670 kb on + strand, within ABIE40_RS02580 at 509.670 kb on + strand, within ABIE40_RS02580 at 509.670 kb on + strand, within ABIE40_RS02580 at 509.670 kb on + strand, within ABIE40_RS02580 at 509.670 kb on + strand, within ABIE40_RS02580 at 509.670 kb on + strand, within ABIE40_RS02580 at 509.670 kb on + strand, within ABIE40_RS02580 at 509.671 kb on - strand, within ABIE40_RS02580 at 509.671 kb on - strand, within ABIE40_RS02580 at 509.671 kb on - strand, within ABIE40_RS02580 at 509.671 kb on - strand, within ABIE40_RS02580 at 509.671 kb on - strand, within ABIE40_RS02580 at 509.671 kb on - strand, within ABIE40_RS02580 at 509.689 kb on - strand, within ABIE40_RS02580 at 509.689 kb on - strand, within ABIE40_RS02580 at 509.811 kb on + strand, within ABIE40_RS02580 at 509.811 kb on + strand, within ABIE40_RS02580 at 509.812 kb on - strand, within ABIE40_RS02580 at 509.812 kb on - strand, within ABIE40_RS02580 at 510.123 kb on + strand, within ABIE40_RS02580 at 510.123 kb on + strand, within ABIE40_RS02580 at 510.123 kb on + strand, within ABIE40_RS02580 at 510.124 kb on - strand, within ABIE40_RS02580 at 510.124 kb on - strand, within ABIE40_RS02580 at 510.124 kb on - strand, within ABIE40_RS02580 at 510.124 kb on - strand, within ABIE40_RS02580 at 510.125 kb on + strand, within ABIE40_RS02580 at 510.150 kb on + strand, within ABIE40_RS02580 at 510.150 kb on + strand, within ABIE40_RS02580 at 510.150 kb on + strand, within ABIE40_RS02580 at 510.150 kb on + strand, within ABIE40_RS02580 at 510.150 kb on + strand, within ABIE40_RS02580 at 510.150 kb on + strand, within ABIE40_RS02580 at 510.150 kb on + strand, within ABIE40_RS02580 at 510.151 kb on - strand, within ABIE40_RS02580 at 510.151 kb on - strand, within ABIE40_RS02580 at 510.180 kb on + strand, within ABIE40_RS02580 at 510.181 kb on - strand, within ABIE40_RS02580 at 510.181 kb on - strand, within ABIE40_RS02580 at 510.181 kb on - strand, within ABIE40_RS02580 at 510.181 kb on - strand, within ABIE40_RS02580 at 510.429 kb on + strand, within ABIE40_RS02580 at 510.429 kb on + strand, within ABIE40_RS02580 at 510.429 kb on + strand, within ABIE40_RS02580 at 510.429 kb on + strand, within ABIE40_RS02580 at 510.429 kb on + strand, within ABIE40_RS02580 at 510.429 kb on + strand, within ABIE40_RS02580 at 510.429 kb on + strand, within ABIE40_RS02580 at 510.430 kb on - strand, within ABIE40_RS02580 at 510.430 kb on - strand, within ABIE40_RS02580 at 510.462 kb on + strand, within ABIE40_RS02580 at 510.462 kb on + strand, within ABIE40_RS02580 at 510.462 kb on + strand, within ABIE40_RS02580 at 510.462 kb on + strand, within ABIE40_RS02580 at 510.462 kb on + strand, within ABIE40_RS02580 at 510.463 kb on - strand, within ABIE40_RS02580 at 510.463 kb on - strand, within ABIE40_RS02580 at 510.463 kb on - strand, within ABIE40_RS02580 at 510.463 kb on - strand, within ABIE40_RS02580 at 510.463 kb on - strand, within ABIE40_RS02580 at 510.531 kb on + strand at 510.564 kb on + strand at 510.564 kb on + strand at 510.564 kb on + strand at 510.564 kb on + strand at 510.564 kb on + strand at 510.564 kb on + strand at 510.564 kb on + strand at 510.565 kb on - strand at 510.565 kb on - strand at 510.707 kb on + strand at 510.707 kb on + strand at 510.707 kb on + strand at 510.707 kb on + strand at 510.707 kb on + strand at 510.707 kb on + strand at 510.708 kb on - strand at 510.715 kb on + strand at 510.715 kb on + strand at 510.716 kb on - strand at 510.716 kb on - strand at 510.855 kb on + strand, within ABIE40_RS02585 at 510.855 kb on + strand, within ABIE40_RS02585 at 510.855 kb on + strand, within ABIE40_RS02585 at 510.855 kb on + strand, within ABIE40_RS02585 at 510.856 kb on - strand, within ABIE40_RS02585 at 510.856 kb on - strand, within ABIE40_RS02585 at 510.856 kb on - strand, within ABIE40_RS02585 at 510.856 kb on - strand, within ABIE40_RS02585 at 510.928 kb on + strand, within ABIE40_RS02585 at 510.928 kb on + strand, within ABIE40_RS02585 at 510.928 kb on + strand, within ABIE40_RS02585 at 510.929 kb on - strand, within ABIE40_RS02585 at 510.929 kb on - strand, within ABIE40_RS02585 at 510.929 kb on - strand, within ABIE40_RS02585 at 510.929 kb on - strand, within ABIE40_RS02585 at 511.126 kb on + strand, within ABIE40_RS02585 at 511.127 kb on - strand, within ABIE40_RS02585 at 511.127 kb on - strand, within ABIE40_RS02585 at 511.171 kb on + strand, within ABIE40_RS02585 at 511.171 kb on + strand, within ABIE40_RS02585 at 511.171 kb on + strand, within ABIE40_RS02585 at 511.201 kb on + strand, within ABIE40_RS02585 at 511.202 kb on - strand, within ABIE40_RS02585 at 511.202 kb on - strand, within ABIE40_RS02585 at 511.249 kb on + strand, within ABIE40_RS02585 at 511.249 kb on + strand, within ABIE40_RS02585 at 511.249 kb on + strand, within ABIE40_RS02585 at 511.250 kb on - strand, within ABIE40_RS02585 at 511.250 kb on - strand, within ABIE40_RS02585 at 511.441 kb on + strand, within ABIE40_RS02585 at 511.441 kb on + strand, within ABIE40_RS02585 at 511.441 kb on + strand, within ABIE40_RS02585 at 511.441 kb on + strand, within ABIE40_RS02585 at 511.441 kb on + strand, within ABIE40_RS02585 at 511.442 kb on - strand, within ABIE40_RS02585 at 511.442 kb on - strand, within ABIE40_RS02585 at 511.442 kb on - strand, within ABIE40_RS02585 at 511.442 kb on - strand, within ABIE40_RS02585 at 511.442 kb on - strand, within ABIE40_RS02585 at 511.442 kb on - strand, within ABIE40_RS02585 at 511.442 kb on - strand, within ABIE40_RS02585 at 511.654 kb on - strand, within ABIE40_RS02585
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 507,904 + ABIE40_RS02565 0.87 +0.6 507,905 - ABIE40_RS02565 0.87 +1.1 507,905 - ABIE40_RS02565 0.87 -1.2 507,905 - ABIE40_RS02565 0.87 +0.4 507,905 - ABIE40_RS02565 0.87 -2.0 507,905 - ABIE40_RS02565 0.87 -1.1 508,060 + -0.7 508,113 - -1.9 508,342 - -0.2 508,342 - +1.1 508,347 + +0.3 508,347 + +0.2 508,347 + -2.1 508,347 + +2.0 508,347 + +0.0 508,348 - -1.2 508,360 + +0.1 508,393 + -0.9 508,394 + -1.4 508,394 + -0.1 508,394 + -0.5 508,394 + +1.1 508,394 + -0.3 508,394 + +0.6 508,395 - +0.7 508,395 - -0.7 508,395 - +1.1 508,395 - +0.7 508,433 + +0.5 508,433 + -0.1 508,434 - -0.4 508,611 + ABIE40_RS02575 0.68 -0.5 508,611 + ABIE40_RS02575 0.68 +1.0 508,785 + +0.5 508,785 + +0.1 508,807 - -0.9 508,807 - -2.5 508,807 - -0.8 508,873 - -3.0 508,873 - -1.7 508,873 - -2.8 508,874 + -2.3 508,874 + -3.6 508,875 - -1.6 508,875 - -3.0 508,932 + -2.3 508,932 + -3.4 508,933 - -4.1 508,933 - -2.3 509,034 + -2.9 509,034 + -5.1 509,034 + -0.4 509,034 + -1.6 509,034 + -4.3 509,034 + -1.6 509,035 - -4.8 509,035 - -3.5 509,035 - -3.5 509,109 + ABIE40_RS02580 0.14 -3.6 509,109 + ABIE40_RS02580 0.14 -2.0 509,109 + ABIE40_RS02580 0.14 -4.5 509,109 + ABIE40_RS02580 0.14 -4.5 509,109 + ABIE40_RS02580 0.14 -1.7 509,109 + ABIE40_RS02580 0.14 -4.0 509,110 - ABIE40_RS02580 0.14 -3.2 509,110 - ABIE40_RS02580 0.14 -5.4 509,110 - ABIE40_RS02580 0.14 -0.3 509,118 + ABIE40_RS02580 0.14 -3.4 509,119 - ABIE40_RS02580 0.14 -2.3 509,119 - ABIE40_RS02580 0.14 -0.7 509,181 + ABIE40_RS02580 0.18 -2.1 509,182 - ABIE40_RS02580 0.18 -3.3 509,182 - ABIE40_RS02580 0.18 -5.7 509,182 - ABIE40_RS02580 0.18 -1.0 509,182 - ABIE40_RS02580 0.18 -2.6 509,209 - ABIE40_RS02580 0.19 -3.9 509,241 + ABIE40_RS02580 0.21 -3.0 509,241 + ABIE40_RS02580 0.21 -2.1 509,241 + ABIE40_RS02580 0.21 -4.6 509,242 - ABIE40_RS02580 0.21 -3.5 509,242 - ABIE40_RS02580 0.21 -3.1 509,242 - ABIE40_RS02580 0.21 -1.2 509,242 - ABIE40_RS02580 0.21 -0.7 509,242 - ABIE40_RS02580 0.21 -4.2 509,310 + ABIE40_RS02580 0.25 -1.4 509,311 - ABIE40_RS02580 0.25 -4.1 509,311 - ABIE40_RS02580 0.25 -3.5 509,311 - ABIE40_RS02580 0.25 -1.0 509,311 - ABIE40_RS02580 0.25 -2.9 509,311 - ABIE40_RS02580 0.25 -2.4 509,311 - ABIE40_RS02580 0.25 -4.6 509,427 + ABIE40_RS02580 0.31 -3.9 509,427 + ABIE40_RS02580 0.31 -3.1 509,428 - ABIE40_RS02580 0.31 -2.6 509,428 - ABIE40_RS02580 0.31 -2.2 509,428 - ABIE40_RS02580 0.31 -3.4 509,428 - ABIE40_RS02580 0.31 -4.5 509,486 + ABIE40_RS02580 0.35 -2.0 509,487 - ABIE40_RS02580 0.35 -2.5 509,531 + ABIE40_RS02580 0.37 -1.4 509,670 + ABIE40_RS02580 0.45 -3.7 509,670 + ABIE40_RS02580 0.45 -2.6 509,670 + ABIE40_RS02580 0.45 -3.8 509,670 + ABIE40_RS02580 0.45 -3.3 509,670 + ABIE40_RS02580 0.45 -3.0 509,670 + ABIE40_RS02580 0.45 -1.7 509,670 + ABIE40_RS02580 0.45 -2.2 509,670 + ABIE40_RS02580 0.45 -2.2 509,670 + ABIE40_RS02580 0.45 -3.3 509,670 + ABIE40_RS02580 0.45 -1.6 509,671 - ABIE40_RS02580 0.45 -4.3 509,671 - ABIE40_RS02580 0.45 -2.2 509,671 - ABIE40_RS02580 0.45 -3.8 509,671 - ABIE40_RS02580 0.45 -2.9 509,671 - ABIE40_RS02580 0.45 -1.7 509,671 - ABIE40_RS02580 0.45 -3.5 509,689 - ABIE40_RS02580 0.46 -3.9 509,689 - ABIE40_RS02580 0.46 -3.3 509,811 + ABIE40_RS02580 0.53 -2.1 509,811 + ABIE40_RS02580 0.53 -2.8 509,812 - ABIE40_RS02580 0.53 -3.3 509,812 - ABIE40_RS02580 0.53 -4.0 510,123 + ABIE40_RS02580 0.70 +0.0 510,123 + ABIE40_RS02580 0.70 -0.4 510,123 + ABIE40_RS02580 0.70 -2.9 510,124 - ABIE40_RS02580 0.70 -0.7 510,124 - ABIE40_RS02580 0.70 -5.0 510,124 - ABIE40_RS02580 0.70 -3.5 510,124 - ABIE40_RS02580 0.70 -2.5 510,125 + ABIE40_RS02580 0.70 -2.9 510,150 + ABIE40_RS02580 0.72 -1.7 510,150 + ABIE40_RS02580 0.72 -3.3 510,150 + ABIE40_RS02580 0.72 -4.0 510,150 + ABIE40_RS02580 0.72 -2.4 510,150 + ABIE40_RS02580 0.72 -2.5 510,150 + ABIE40_RS02580 0.72 +1.6 510,150 + ABIE40_RS02580 0.72 -2.2 510,151 - ABIE40_RS02580 0.72 -3.8 510,151 - ABIE40_RS02580 0.72 -2.4 510,180 + ABIE40_RS02580 0.73 -1.0 510,181 - ABIE40_RS02580 0.73 -2.4 510,181 - ABIE40_RS02580 0.73 +1.6 510,181 - ABIE40_RS02580 0.73 -0.9 510,181 - ABIE40_RS02580 0.73 -4.0 510,429 + ABIE40_RS02580 0.87 +0.6 510,429 + ABIE40_RS02580 0.87 -1.6 510,429 + ABIE40_RS02580 0.87 -3.3 510,429 + ABIE40_RS02580 0.87 -3.5 510,429 + ABIE40_RS02580 0.87 -2.2 510,429 + ABIE40_RS02580 0.87 -0.4 510,429 + ABIE40_RS02580 0.87 -3.0 510,430 - ABIE40_RS02580 0.87 -3.2 510,430 - ABIE40_RS02580 0.87 -2.8 510,462 + ABIE40_RS02580 0.89 -5.1 510,462 + ABIE40_RS02580 0.89 -2.7 510,462 + ABIE40_RS02580 0.89 -0.2 510,462 + ABIE40_RS02580 0.89 -3.4 510,462 + ABIE40_RS02580 0.89 -2.0 510,463 - ABIE40_RS02580 0.89 -1.2 510,463 - ABIE40_RS02580 0.89 -2.0 510,463 - ABIE40_RS02580 0.89 -2.4 510,463 - ABIE40_RS02580 0.89 -4.1 510,463 - ABIE40_RS02580 0.89 -3.8 510,531 + -5.7 510,564 + -4.1 510,564 + -3.0 510,564 + -1.3 510,564 + -1.6 510,564 + -2.6 510,564 + -1.8 510,564 + -0.9 510,565 - -0.4 510,565 - -1.2 510,707 + -2.7 510,707 + -4.7 510,707 + -5.0 510,707 + -3.0 510,707 + -3.4 510,707 + -2.6 510,708 - -1.2 510,715 + -3.2 510,715 + -3.1 510,716 - -4.0 510,716 - -1.6 510,855 + ABIE40_RS02585 0.13 -1.6 510,855 + ABIE40_RS02585 0.13 -1.7 510,855 + ABIE40_RS02585 0.13 -5.1 510,855 + ABIE40_RS02585 0.13 -2.1 510,856 - ABIE40_RS02585 0.13 -3.7 510,856 - ABIE40_RS02585 0.13 -2.5 510,856 - ABIE40_RS02585 0.13 -4.1 510,856 - ABIE40_RS02585 0.13 -4.5 510,928 + ABIE40_RS02585 0.19 -3.7 510,928 + ABIE40_RS02585 0.19 -4.1 510,928 + ABIE40_RS02585 0.19 -3.7 510,929 - ABIE40_RS02585 0.19 -2.6 510,929 - ABIE40_RS02585 0.19 -1.6 510,929 - ABIE40_RS02585 0.19 -2.8 510,929 - ABIE40_RS02585 0.19 -3.7 511,126 + ABIE40_RS02585 0.35 -4.0 511,127 - ABIE40_RS02585 0.36 -2.2 511,127 - ABIE40_RS02585 0.36 -4.7 511,171 + ABIE40_RS02585 0.39 -4.8 511,171 + ABIE40_RS02585 0.39 -2.1 511,171 + ABIE40_RS02585 0.39 -3.6 511,201 + ABIE40_RS02585 0.42 -2.5 511,202 - ABIE40_RS02585 0.42 -1.2 511,202 - ABIE40_RS02585 0.42 -4.8 511,249 + ABIE40_RS02585 0.46 -2.6 511,249 + ABIE40_RS02585 0.46 -2.4 511,249 + ABIE40_RS02585 0.46 -4.6 511,250 - ABIE40_RS02585 0.46 -1.8 511,250 - ABIE40_RS02585 0.46 -4.1 511,441 + ABIE40_RS02585 0.62 -4.9 511,441 + ABIE40_RS02585 0.62 -2.8 511,441 + ABIE40_RS02585 0.62 -1.9 511,441 + ABIE40_RS02585 0.62 -2.4 511,441 + ABIE40_RS02585 0.62 -0.7 511,442 - ABIE40_RS02585 0.62 -4.9 511,442 - ABIE40_RS02585 0.62 -4.7 511,442 - ABIE40_RS02585 0.62 -1.9 511,442 - ABIE40_RS02585 0.62 -2.9 511,442 - ABIE40_RS02585 0.62 -1.6 511,442 - ABIE40_RS02585 0.62 -4.6 511,442 - ABIE40_RS02585 0.62 -0.2 511,654 - ABIE40_RS02585 0.79 -3.7
Or see this region's nucleotide sequence