Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS19975 and ABID97_RS19980 are separated by 186 nucleotides ABID97_RS19980 and ABID97_RS19985 are separated by 43 nucleotides
ABID97_RS19975: ABID97_RS19975 - hypothetical protein, at 4,124,239 to 4,125,114
_RS19975
ABID97_RS19980: ABID97_RS19980 - alpha-E domain-containing protein, at 4,125,301 to 4,126,257
_RS19980
ABID97_RS19985: ABID97_RS19985 - circularly permuted type 2 ATP-grasp protein, at 4,126,301 to 4,127,803
_RS19985
Position (kb) 4125
4126
4127 Strain fitness (log2 ratio) -1
0
1 at 4124.339 kb on - strand, within ABID97_RS19975 at 4124.570 kb on + strand, within ABID97_RS19975 at 4124.570 kb on + strand, within ABID97_RS19975 at 4124.690 kb on + strand, within ABID97_RS19975 at 4124.699 kb on + strand, within ABID97_RS19975 at 4124.700 kb on - strand, within ABID97_RS19975 at 4124.807 kb on + strand, within ABID97_RS19975 at 4124.876 kb on + strand, within ABID97_RS19975 at 4125.153 kb on + strand at 4125.189 kb on + strand at 4125.229 kb on - strand at 4125.377 kb on + strand at 4125.378 kb on - strand at 4125.378 kb on - strand at 4125.420 kb on - strand, within ABID97_RS19980 at 4125.651 kb on - strand, within ABID97_RS19980 at 4125.779 kb on + strand, within ABID97_RS19980 at 4125.779 kb on + strand, within ABID97_RS19980 at 4125.780 kb on - strand, within ABID97_RS19980 at 4126.082 kb on + strand, within ABID97_RS19980 at 4126.083 kb on - strand, within ABID97_RS19980 at 4126.127 kb on + strand, within ABID97_RS19980 at 4126.127 kb on + strand, within ABID97_RS19980 at 4126.128 kb on - strand, within ABID97_RS19980 at 4126.169 kb on + strand at 4126.229 kb on + strand at 4126.575 kb on + strand, within ABID97_RS19985 at 4126.743 kb on + strand, within ABID97_RS19985 at 4126.744 kb on - strand, within ABID97_RS19985 at 4126.744 kb on - strand, within ABID97_RS19985 at 4127.100 kb on + strand, within ABID97_RS19985 at 4127.100 kb on + strand, within ABID97_RS19985 at 4127.100 kb on + strand, within ABID97_RS19985
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 4,124,339 - ABID97_RS19975 0.11 +0.3 4,124,570 + ABID97_RS19975 0.38 +0.1 4,124,570 + ABID97_RS19975 0.38 -0.0 4,124,690 + ABID97_RS19975 0.51 +0.8 4,124,699 + ABID97_RS19975 0.53 -0.4 4,124,700 - ABID97_RS19975 0.53 -1.0 4,124,807 + ABID97_RS19975 0.65 +1.4 4,124,876 + ABID97_RS19975 0.73 -0.2 4,125,153 + -0.4 4,125,189 + -0.1 4,125,229 - +0.7 4,125,377 + -0.2 4,125,378 - +0.4 4,125,378 - +0.5 4,125,420 - ABID97_RS19980 0.12 -0.8 4,125,651 - ABID97_RS19980 0.37 +1.2 4,125,779 + ABID97_RS19980 0.50 +0.9 4,125,779 + ABID97_RS19980 0.50 +0.3 4,125,780 - ABID97_RS19980 0.50 +0.9 4,126,082 + ABID97_RS19980 0.82 -0.2 4,126,083 - ABID97_RS19980 0.82 +0.2 4,126,127 + ABID97_RS19980 0.86 +0.4 4,126,127 + ABID97_RS19980 0.86 -0.6 4,126,128 - ABID97_RS19980 0.86 +0.0 4,126,169 + +1.4 4,126,229 + +0.3 4,126,575 + ABID97_RS19985 0.18 +0.1 4,126,743 + ABID97_RS19985 0.29 +1.4 4,126,744 - ABID97_RS19985 0.29 -0.5 4,126,744 - ABID97_RS19985 0.29 -0.3 4,127,100 + ABID97_RS19985 0.53 -0.1 4,127,100 + ABID97_RS19985 0.53 +0.9 4,127,100 + ABID97_RS19985 0.53 +0.9
Or see this region's nucleotide sequence